RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 TOM1L1O75674 476 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 CRKP46108 304 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 DNAJC24Q6P3W2 148 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 RSPH3Q86UC2 560 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 IL31RAQ8NI17 732 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 NKD2Q969F2 451 aaPredicted RBP16.54■□□□□ 0.24
CKAP4-201ENST00000378026 UGT1A7Q9HAW7 530 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 UGT1A10Q9HAW8 530 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 UGT1A8Q9HAW9 530 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 PICK1Q9NRD5 415 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 CAPN8A6NHC0 703 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 LYPLA1O75608 230 aaPredicted RBP16.54■□□□□ 0.24
CKAP4-201ENST00000378026 CD48P09326 243 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 VIL1P09327 827 aaKnown RBP16.54■□□□□ 0.24
CKAP4-201ENST00000378026 RAG1P15918 1043 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 TPP2P29144 1249 aaPredicted RBP16.54■□□□□ 0.24
CKAP4-201ENST00000378026 TMED1Q13445 227 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 PAOXQ6QHF9 649 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 ACER1Q8TDN7 264 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 BSNDQ8WZ55 320 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 MXRA8Q9BRK3 442 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 TCEAL9Q9UHQ7 104 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 PCDHGB4Q9UN71 923 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 PCDHGB5Q9Y5G0 923 aa16.54■□□□□ 0.24
CKAP4-201ENST00000378026 CXorf49A8MYA2 514 aaPredicted RBP16.53■□□□□ 0.24
CKAP4-201ENST00000378026 MAPTP10636 758 aaKnown RBP16.53■□□□□ 0.24
CKAP4-201ENST00000378026 SLC18A2Q05940 514 aa16.53■□□□□ 0.24
CKAP4-201ENST00000378026 DMP1Q13316 513 aaPredicted RBP16.53■□□□□ 0.24
CKAP4-201ENST00000378026 ZNF677Q86XU0 584 aa16.53■□□□□ 0.24
CKAP4-201ENST00000378026 SLC35B2Q8TB61 432 aa16.53■□□□□ 0.24
CKAP4-201ENST00000378026 SLC44A1Q8WWI5 657 aa16.53■□□□□ 0.24
CKAP4-201ENST00000378026 RBM17Q96I25 401 aaKnown RBP16.53■□□□□ 0.24
CKAP4-201ENST00000378026 MFSD14AQ96MC6 490 aa16.53■□□□□ 0.24
CKAP4-201ENST00000378026 GPAMQ9HCL2 828 aa16.53■□□□□ 0.24
CKAP4-201ENST00000378026 PCSK1NQ9UHG2 260 aa16.53■□□□□ 0.24
CKAP4-201ENST00000378026 MYH9P35579 1960 aaKnown RBP16.53■□□□□ 0.24
CKAP4-201ENST00000378026 C15orf38-AP3S2A0A0A6YYH1 394 aa16.53■□□□□ 0.24
CKAP4-201ENST00000378026 TMEM191CA6NGB0 347 aa16.53■□□□□ 0.24
CKAP4-201ENST00000378026 ZSCAN9O15535 394 aaPredicted RBP16.53■□□□□ 0.24
CKAP4-201ENST00000378026 TMEM191BP0C7N4 346 aa16.53■□□□□ 0.24
CKAP4-201ENST00000378026 CHN2P52757 468 aa16.53■□□□□ 0.24
CKAP4-201ENST00000378026 FOLH1Q04609 750 aa16.53■□□□□ 0.24
CKAP4-201ENST00000378026 AOC3Q16853 763 aa16.53■□□□□ 0.24
CKAP4-201ENST00000378026 FAM98CQ17RN3 349 aaKnown RBP16.53■□□□□ 0.24
CKAP4-201ENST00000378026 FAXCQ5TGI0 409 aa16.53■□□□□ 0.24
CKAP4-201ENST00000378026 ATG16L1Q676U5 607 aa16.53■□□□□ 0.24
CKAP4-201ENST00000378026 B3GNT9Q6UX72 402 aa16.53■□□□□ 0.24
CKAP4-201ENST00000378026 ENOSF1Q7L5Y1 443 aa16.53■□□□□ 0.24
CKAP4-201ENST00000378026 ARPINQ7Z6K5 226 aa16.53■□□□□ 0.24
CKAP4-201ENST00000378026 USP37Q86T82 979 aa16.53■□□□□ 0.24
CKAP4-201ENST00000378026 HPS6Q86YV9 775 aa16.53■□□□□ 0.24
CKAP4-201ENST00000378026 GPD1LQ8N335 351 aa16.53■□□□□ 0.24
CKAP4-201ENST00000378026 CEP70Q8NHQ1 597 aa16.53■□□□□ 0.24
CKAP4-201ENST00000378026 TRIM56Q9BRZ2 755 aaKnown RBP16.53■□□□□ 0.24
CKAP4-201ENST00000378026 GRIP2Q9C0E4 1043 aa16.53■□□□□ 0.24
CKAP4-201ENST00000378026 APOBEC3GQ9HC16 384 aaKnown RBP16.53■□□□□ 0.24
CKAP4-201ENST00000378026 PENKP01210 267 aaPredicted RBP16.52■□□□□ 0.24
CKAP4-201ENST00000378026 NCKAP1LP55160 1127 aa16.52■□□□□ 0.24
CKAP4-201ENST00000378026 CCNIQ14094 377 aa16.52■□□□□ 0.24
CKAP4-201ENST00000378026 SMAD1Q15797 465 aaKnown RBP16.52■□□□□ 0.24
CKAP4-201ENST00000378026 TRAPPC3LQ5T215 181 aa16.52■□□□□ 0.24
CKAP4-201ENST00000378026 TDRD10Q5VZ19 366 aaKnown RBP16.52■□□□□ 0.24
CKAP4-201ENST00000378026 SH2D5Q6ZV89 423 aa16.52■□□□□ 0.24
CKAP4-201ENST00000378026 SEPT12Q8IYM1 358 aa16.52■□□□□ 0.24
CKAP4-201ENST00000378026 GMCL1P1Q8NEA9 526 aa16.52■□□□□ 0.24
CKAP4-201ENST00000378026 TMC2Q8TDI7 906 aa16.52■□□□□ 0.24
CKAP4-201ENST00000378026 LRRN4Q8WUT4 740 aa16.52■□□□□ 0.24
CKAP4-201ENST00000378026 FBXO28Q9NVF7 368 aa16.52■□□□□ 0.24
CKAP4-201ENST00000378026 FAM198AQ9UFP1 575 aa16.52■□□□□ 0.24
CKAP4-201ENST00000378026 APPL1Q9UKG1 709 aa16.52■□□□□ 0.24
CKAP4-201ENST00000378026 TBC1D30Q9Y2I9 924 aa16.52■□□□□ 0.24
CKAP4-201ENST00000378026 CPOXP36551 454 aa16.52■□□□□ 0.23
CKAP4-201ENST00000378026 HNRNPDQ14103 355 aaKnown RBP16.52■□□□□ 0.23
CKAP4-201ENST00000378026 ICA1LQ8NDH6 482 aa16.52■□□□□ 0.23
CKAP4-201ENST00000378026 PIP4K2CQ8TBX8 421 aa16.52■□□□□ 0.23
CKAP4-201ENST00000378026 CCDC28BQ9BUN5 200 aa16.52■□□□□ 0.23
CKAP4-201ENST00000378026 MRPS5P82675 430 aaKnown RBP16.51■□□□□ 0.23
CKAP4-201ENST00000378026 ACBD5Q5T8D3 534 aaPredicted RBP16.51■□□□□ 0.23
CKAP4-201ENST00000378026 MROH9Q5TGP6 573 aa16.51■□□□□ 0.23
CKAP4-201ENST00000378026 IYDQ6PHW0 289 aa16.51■□□□□ 0.23
CKAP4-201ENST00000378026 MAP4K3Q8IVH8 894 aa16.51■□□□□ 0.23
CKAP4-201ENST00000378026 EHMT1Q9H9B1 1298 aa16.51■□□□□ 0.23
CKAP4-201ENST00000378026 FETUBQ9UGM5 382 aa16.51■□□□□ 0.23
CKAP4-201ENST00000378026 POLIQ9UNA4 740 aa16.51■□□□□ 0.23
CKAP4-201ENST00000378026 PLLPQ9Y342 182 aa16.51■□□□□ 0.23
CKAP4-201ENST00000378026 PTPRJQ12913 1337 aa16.51■□□□□ 0.23
CKAP4-201ENST00000378026 SPDYE16A6NNV3 312 aaPredicted RBP16.51■□□□□ 0.23
CKAP4-201ENST00000378026 PDLIM1O00151 329 aa16.51■□□□□ 0.23
CKAP4-201ENST00000378026 GALK1P51570 392 aa16.51■□□□□ 0.23
CKAP4-201ENST00000378026 CUL2Q13617 745 aa16.51■□□□□ 0.23
CKAP4-201ENST00000378026 SEZ6Q53EL9 994 aa16.51■□□□□ 0.23
CKAP4-201ENST00000378026 PHF13Q86YI8 300 aaPredicted RBP16.51■□□□□ 0.23
CKAP4-201ENST00000378026 RFX6Q8HWS3 928 aa16.51■□□□□ 0.23
CKAP4-201ENST00000378026 DGCR14Q96DF8 476 aaKnown RBP16.51■□□□□ 0.23
CKAP4-201ENST00000378026 DNAJB4Q9UDY4 337 aa16.51■□□□□ 0.23
CKAP4-201ENST00000378026 HBS1LQ9Y450 684 aaKnown RBP16.51■□□□□ 0.23
CKAP4-201ENST00000378026 MAGEB3O15480 346 aa16.51■□□□□ 0.23
CKAP4-201ENST00000378026 ATP6V1G1O75348 118 aa16.51■□□□□ 0.23
CKAP4-201ENST00000378026 TMCC1O94876 653 aa16.51■□□□□ 0.23
CKAP4-201ENST00000378026 MAP3K6O95382 1288 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms