RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 UMODL1Q5DID0 1318 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 E5RI56 91 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 NPR1P16066 1061 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 KCNT1Q5JUK3 1230 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 RORBQ92753 470 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 TP53INP1Q96A56 240 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 C9orf72Q96LT7 481 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 PRR36Q9H6K5 1346 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 CENPXA8MT69 81 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 RALAP11233 206 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 MTTPP55157 894 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 MARSP56192 900 aaKnown RBP9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 BFSP2Q13515 415 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 TUBA3CQ13748 450 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 RWDD4Q6NW29 188 aaKnown RBP9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 LARGE2Q8N3Y3 721 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 NSUN4Q96CB9 384 aaKnown RBP9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 CYP3A43Q9HB55 503 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 NYAP2Q9P242 653 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 WDR37Q9Y2I8 494 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 LSM1O15116 133 aaKnown RBP9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 NMT2O60551 498 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 FECHP22830 423 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 SUPT20HL1Q3ZLR7 823 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 SCARA3Q6AZY7 606 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 CLEC4MQ9H2X3 399 aaPredicted RBP9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 AASDHPPTQ9NRN7 309 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 AGPAT3Q9NRZ7 376 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 DCCP43146 1447 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 USP17L3A6NCW0 530 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 USP17L4A6NCW7 530 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 PRPF4O43172 522 aaKnown RBP eCLIP9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 MAGEC1O60732 1142 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 CAMTA2O94983 1202 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 ENO3P13929 434 aaPredicted RBP9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 RBP5P82980 135 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 CDK18Q07002 472 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 DMC1Q14565 340 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 USP17L1Q7RTZ2 530 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 HELQQ8TDG4 1101 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 EPS8L3Q8TE67 593 aaKnown RBP9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 AP3S1Q92572 193 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 HSPH1Q92598 858 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 PTCD3Q96EY7 689 aaKnown RBP9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 FOPNLQ96NB1 174 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 ASTN2O75129 1339 aaPredicted RBP9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 TPRP12270 2363 aaKnown RBP9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 CHADO15335 359 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 ITGAVP06756 1048 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 UBTFL6P0CB48 400 aaPredicted RBP9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 KITP10721 976 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 CYP11B1P15538 503 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 POLD2P49005 469 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 NCOA4Q13772 614 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 RRP1BQ14684 758 aaKnown RBP9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 EPHA10Q5JZY3 1008 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 SLC9A9Q8IVB4 645 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 ADGRF4Q8IZF3 695 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 LRRC40Q9H9A6 602 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 NAALADL1Q9UQQ1 740 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 KRT87PA6NCN2 255 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 HACD1B0YJ81 288 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 SOAT2O75908 522 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 CRABP2P29373 138 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 AQP5P55064 265 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 KCTD1Q719H9 257 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 ARHGEF19Q8IW93 802 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 SFRP1Q8N474 314 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 PGBD4Q96DM1 585 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 OTUD5Q96G74 571 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 GINS4Q9BRT9 223 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 TMEM120AQ9BXJ8 343 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 FHDC1Q9C0D6 1143 aaPredicted RBP9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 HOXC10Q9NYD6 342 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 ARHGAP20Q9P2F6 1191 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 FER1L4A9Z1Z3 1794 aa9.12□□□□□ -0.95
SHROOM4-202ENST00000376020 POLD1P28340 1107 aa9.11□□□□□ -0.95
SHROOM4-202ENST00000376020 ERVK-9P63128 1117 aa9.11□□□□□ -0.95
SHROOM4-202ENST00000376020 MAPRE1Q15691 268 aaKnown RBP9.11□□□□□ -0.95
SHROOM4-202ENST00000376020 SLC15A2Q16348 729 aa9.11□□□□□ -0.95
SHROOM4-202ENST00000376020 Q4G0T1 1027 aa9.11□□□□□ -0.95
SHROOM4-202ENST00000376020 TMC5Q6UXY8 1006 aa9.11□□□□□ -0.95
SHROOM4-202ENST00000376020 TTC30BQ8N4P2 665 aa9.11□□□□□ -0.95
SHROOM4-202ENST00000376020 NBPF15Q8N660 670 aa9.11□□□□□ -0.95
SHROOM4-202ENST00000376020 SHCBP1Q8NEM2 672 aa9.11□□□□□ -0.95
SHROOM4-202ENST00000376020 TSPAN14Q8NG11 270 aa9.11□□□□□ -0.95
SHROOM4-202ENST00000376020 SLC12A4Q9UP95 1085 aa9.11□□□□□ -0.95
SHROOM4-202ENST00000376020 XRN1Q8IZH2 1706 aaKnown RBP9.11□□□□□ -0.95
SHROOM4-202ENST00000376020 GOLGA8RI6L899 631 aa9.11□□□□□ -0.95
SHROOM4-202ENST00000376020 ATP6V1B1P15313 513 aa9.11□□□□□ -0.95
SHROOM4-202ENST00000376020 ATXN3P54252 364 aaPredicted RBP9.11□□□□□ -0.95
SHROOM4-202ENST00000376020 COPZ1P61923 177 aa9.11□□□□□ -0.95
SHROOM4-202ENST00000376020 TSPY1Q01534 308 aa9.11□□□□□ -0.95
SHROOM4-202ENST00000376020 ARMC3Q5W041 872 aa9.11□□□□□ -0.95
SHROOM4-202ENST00000376020 PCMTD2Q9NV79 361 aa9.11□□□□□ -0.95
SHROOM4-202ENST00000376020 NXF1Q9UBU9 619 aaKnown RBP9.11□□□□□ -0.95
SHROOM4-202ENST00000376020 CYP2D7A0A087X1C5 515 aa9.11□□□□□ -0.95
SHROOM4-202ENST00000376020 MSH3P20585 1137 aa9.11□□□□□ -0.95
SHROOM4-202ENST00000376020 PRDX6P30041 224 aa9.11□□□□□ -0.95
SHROOM4-202ENST00000376020 ATICP31939 592 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms