RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 TRIM49D1C9J1S8 452 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 ATP9AO75110 1047 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 CD4P01730 458 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 NPR3P17342 541 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 TC2NQ8N9U0 490 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 RNPEPQ9H4A4 650 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 ZC3H4Q9UPT8 1303 aaKnown RBP20.01■□□□□ 0.79
HDAC4-201ENST00000345617 ALDH1A1P00352 501 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 ACCSLQ4AC99 568 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 AADATQ8N5Z0 425 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 CHD4Q14839 1912 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 KCNA6P17658 529 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 NCOA4Q13772 614 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 TRPC4APQ8TEL6 797 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 DNAJC7Q99615 494 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 DDX20Q9UHI6 824 aaKnown RBP20.01■□□□□ 0.79
HDAC4-201ENST00000345617 TMEM114B3SHH9 223 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 ZBTB39O15060 712 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 ATP6AP1LQ52LC2 224 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 ARAP3Q8WWN8 1544 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 ADORA2BP29275 332 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 CNOT7Q9UIV1 285 aaKnown RBP20.01■□□□□ 0.79
HDAC4-201ENST00000345617 SLC39A10Q9ULF5 831 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 A0A0A6YYK5 440 aaPredicted RBP20.01■□□□□ 0.79
HDAC4-201ENST00000345617 NCAM2O15394 837 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 ATP6V1B2P21281 511 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 CLEC4GQ6UXB4 293 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 COMMD3-BMI1R4GMX3 469 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 C15orf38-AP3S2A0A0A6YYH1 394 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 SEC24CP53992 1094 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 TRAF2Q12933 501 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 ARPINQ7Z6K5 226 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 PCDHA10Q9Y5I2 948 aa20.01■□□□□ 0.79
HDAC4-201ENST00000345617 SRRM3A6NNA2 597 aaPredicted RBP20■□□□□ 0.79
HDAC4-201ENST00000345617 KCNMA1Q12791 1236 aa20■□□□□ 0.79
HDAC4-201ENST00000345617 STX4Q12846 297 aa20■□□□□ 0.79
HDAC4-201ENST00000345617 ZNF618Q5T7W0 954 aa20■□□□□ 0.79
HDAC4-201ENST00000345617 TRMT6Q9UJA5 497 aaKnown RBP20■□□□□ 0.79
HDAC4-201ENST00000345617 LSM7Q9UK45 103 aaKnown RBP20■□□□□ 0.79
HDAC4-201ENST00000345617 RNF112Q9ULX5 631 aa20■□□□□ 0.79
HDAC4-201ENST00000345617 PEX1O43933 1283 aa20■□□□□ 0.79
HDAC4-201ENST00000345617 SAMD4BQ5PRF9 694 aaKnown RBP20■□□□□ 0.79
HDAC4-201ENST00000345617 PHACTR1Q9C0D0 580 aa20■□□□□ 0.79
HDAC4-201ENST00000345617 SLC30A1Q9Y6M5 507 aa20■□□□□ 0.79
HDAC4-201ENST00000345617 URB1O60287 2271 aaKnown RBP20■□□□□ 0.79
HDAC4-201ENST00000345617 CCNA2P20248 432 aa20■□□□□ 0.79
HDAC4-201ENST00000345617 GUCY1A2P33402 732 aa20■□□□□ 0.79
HDAC4-201ENST00000345617 USP33Q8TEY7 942 aa20■□□□□ 0.79
HDAC4-201ENST00000345617 BTBD10Q9BSF8 475 aa20■□□□□ 0.79
HDAC4-201ENST00000345617 SIK2Q9H0K1 926 aa20■□□□□ 0.79
HDAC4-201ENST00000345617 MAPRE3Q9UPY8 281 aa20■□□□□ 0.79
HDAC4-201ENST00000345617 CYP19A1P11511 503 aaPredicted RBP20■□□□□ 0.79
HDAC4-201ENST00000345617 RDM1Q8NG50 284 aa20■□□□□ 0.79
HDAC4-201ENST00000345617 C9orf72Q96LT7 481 aa20■□□□□ 0.79
HDAC4-201ENST00000345617 FAM111AQ96PZ2 611 aa20■□□□□ 0.79
HDAC4-201ENST00000345617 THAP1Q9NVV9 213 aa20■□□□□ 0.79
HDAC4-201ENST00000345617 LCA5LO95447 670 aa20■□□□□ 0.79
HDAC4-201ENST00000345617 EXOC3L1Q86VI1 746 aa20■□□□□ 0.79
HDAC4-201ENST00000345617 OR6Y1Q8NGX8 325 aa20■□□□□ 0.79
HDAC4-201ENST00000345617 ZSWIM1Q9BR11 485 aa20■□□□□ 0.79
HDAC4-201ENST00000345617 WDR12Q9GZL7 423 aaKnown RBP20■□□□□ 0.79
HDAC4-201ENST00000345617 TMEM117Q9H0C3 514 aa20■□□□□ 0.79
HDAC4-201ENST00000345617 STAU2Q9NUL3 570 aaKnown RBP eCLIP20■□□□□ 0.799e-8■■■■□ 23.7
HDAC4-201ENST00000345617 ZNF608Q9ULD9 1512 aaPredicted RBP20■□□□□ 0.79
HDAC4-201ENST00000345617 HEATR4Q86WZ0 1026 aa20■□□□□ 0.79
HDAC4-201ENST00000345617 FAM217BQ9NTX9 383 aaPredicted RBP20■□□□□ 0.79
HDAC4-201ENST00000345617 DRG1Q9Y295 367 aaKnown RBP20■□□□□ 0.79
HDAC4-201ENST00000345617 CYP2E1P05181 493 aaPredicted RBP20■□□□□ 0.79
HDAC4-201ENST00000345617 PDGFRAP16234 1089 aa20■□□□□ 0.79
HDAC4-201ENST00000345617 GMFBP60983 142 aa20■□□□□ 0.79
HDAC4-201ENST00000345617 DYNLL1P63167 89 aaKnown RBP20■□□□□ 0.79
HDAC4-201ENST00000345617 BOLA3Q53S33 107 aa20■□□□□ 0.79
HDAC4-201ENST00000345617 SLC7A14Q8TBB6 771 aa20■□□□□ 0.79
HDAC4-201ENST00000345617 CCDC28BQ9BUN5 200 aa20■□□□□ 0.79
HDAC4-201ENST00000345617 MAGEB16A2A368 324 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 TBC1D12O60347 775 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 CASP12Q6UXS9 341 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 KIF12Q96FN5 646 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 LOC102724428A0A0B4J2F2 783 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 LCP1P13796 627 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 GTF2H1P32780 548 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 SIK1P57059 783 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 SNX30Q5VWJ9 437 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 MTDHQ86UE4 582 aaKnown RBP19.99■□□□□ 0.79
HDAC4-201ENST00000345617 CHP1Q99653 195 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 TMEM47Q9BQJ4 181 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 FKBP14Q9NWM8 211 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 DGKIO75912 1065 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 TWF1Q12792 350 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 GDPD5Q8WTR4 605 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 EFCAB10A6NFE3 127 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 WDR72Q3MJ13 1102 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 FAM49AQ9H0Q0 323 aaPredicted RBP19.99■□□□□ 0.79
HDAC4-201ENST00000345617 WWP2O00308 870 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 BTN3A3O00478 584 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 PRKAB2O43741 272 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 ALOX5P09917 674 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 OTOAQ7RTW8 1153 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 TDRD5Q8NAT2 981 aaKnown RBP19.99■□□□□ 0.79
HDAC4-201ENST00000345617 WWOXQ9NZC7 414 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms