RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 UGT1A9O60656 530 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 MAP3K6O95382 1288 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 HLA-DRAP01903 254 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 P4HBP07237 508 aaKnown RBP10.07□□□□□ -0.8
PTPRA-202ENST00000318266 VCLP18206 1134 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 NPTX2P47972 431 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 MSLNQ13421 630 aaPredicted RBP10.07□□□□□ -0.8
PTPRA-202ENST00000318266 TMED1Q13445 227 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 DLGAP5Q15398 846 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 SLC39A4Q6P5W5 647 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 SH3BP5LQ7L8J4 393 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 RSPH3Q86UC2 560 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 PPP1R14CQ8TAE6 165 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 ACER1Q8TDN7 264 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 E2F7Q96AV8 911 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 AGBL1Q96MI9 1066 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 ZC3H12CQ9C0D7 883 aaKnown RBP10.07□□□□□ -0.8
PTPRA-202ENST00000318266 UGT1A7Q9HAW7 530 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 UGT1A10Q9HAW8 530 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 UGT1A8Q9HAW9 530 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 HOMER2Q9NSB8 354 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 FBXO28Q9NVF7 368 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 RPS6KL1Q9Y6S9 549 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 NRXN2Q9P2S2 1712 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.07□□□□□ -0.8
PTPRA-202ENST00000318266 CAPN8A6NHC0 703 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 TOM1L1O75674 476 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 ITGA2BP08514 1039 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 CD48P09326 243 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 PDK3Q15120 406 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 SEZ6Q53EL9 994 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 EFHC1Q5JVL4 640 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 CIAPIN1Q6FI81 312 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 RBM44Q6ZP01 1051 aaKnown RBP10.07□□□□□ -0.8
PTPRA-202ENST00000318266 C15orf52Q6ZUT6 534 aaKnown RBP10.07□□□□□ -0.8
PTPRA-202ENST00000318266 LCA5Q86VQ0 697 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 PDSS2Q86YH6 399 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 NUDCD3Q8IVD9 361 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 C12orf56Q8IXR9 622 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 CEP70Q8NHQ1 597 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 BSNDQ8WZ55 320 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 WWP1Q9H0M0 922 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 S100A14Q9HCY8 104 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 SSU72Q9NP77 194 aaKnown RBP10.07□□□□□ -0.8
PTPRA-202ENST00000318266 KMT5AQ9NQR1 393 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 PARVAQ9NVD7 372 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 PCSK1NQ9UHG2 260 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 IP6K2Q9UHH9 426 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 PCDHGB4Q9UN71 923 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 FARP1Q9Y4F1 1045 aaPredicted RBP10.07□□□□□ -0.8
PTPRA-202ENST00000318266 PCDHGB5Q9Y5G0 923 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 SNCAIPQ9Y6H5 919 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 SLC4A7Q9Y6M7 1214 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 CNTNAP4Q9C0A0 1308 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 A0A088AWK7 358 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 LYPLA1O75608 230 aaPredicted RBP10.06□□□□□ -0.8
PTPRA-202ENST00000318266 TGDSO95455 350 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 PROCP04070 461 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 ASLP04424 464 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 WEE2P0C1S8 567 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 DHRS4L1P0CG22 281 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 QARSP47897 775 aaKnown RBP10.06□□□□□ -0.8
PTPRA-202ENST00000318266 ATXN3P54252 364 aaPredicted RBP10.06□□□□□ -0.8
PTPRA-202ENST00000318266 GCNT1Q02742 428 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 DNAJC24Q6P3W2 148 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 FBXL19Q6PCT2 694 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 TMEM179Q6ZVK1 233 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 LARGE2Q8N3Y3 721 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 NAT8LQ8N9F0 302 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 TMEM161BQ8NDZ6 487 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 FAM172AQ8WUF8 416 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 NCSTNQ92542 709 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 GRIP2Q9C0E4 1043 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 DBNDD1Q9H9R9 158 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 PI4KBQ9UBF8 816 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 APPL1Q9UKG1 709 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 ZNRF3Q9ULT6 936 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 DICER1Q9UPY3 1922 aaKnown RBP10.06□□□□□ -0.8
PTPRA-202ENST00000318266 SPDYE16A6NNV3 312 aaPredicted RBP10.06□□□□□ -0.8
PTPRA-202ENST00000318266 CXorf49A8MYA2 514 aaPredicted RBP10.06□□□□□ -0.8
PTPRA-202ENST00000318266 PABPC4LP0CB38 370 aaKnown RBP10.06□□□□□ -0.8
PTPRA-202ENST00000318266 UQCRBP14927 111 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 CDKN2BP42772 138 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 CRKP46108 304 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 DMP1Q13316 513 aaPredicted RBP10.06□□□□□ -0.8
PTPRA-202ENST00000318266 CCDC142Q17RM4 750 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 DNAL1Q4LDG9 190 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 PLEKHA7Q6IQ23 1121 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 CHSY1Q86X52 802 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 CRLF3Q8IUI8 442 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 TNS4Q8IZW8 715 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 ABRAQ8N0Z2 381 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 PIP4K2CQ8TBX8 421 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 DHRS4Q9BTZ2 278 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 KLHL4Q9C0H6 718 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 KCNK4Q9NYG8 393 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 SCINQ9Y6U3 715 aa10.06□□□□□ -0.8
PTPRA-202ENST00000318266 SBF1O95248 1867 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 C15orf38-AP3S2A0A0A6YYH1 394 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 ITGAVP06756 1048 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms