RNA–Protein interactions for RNA: ENST00000312734.8

CGREF1-202, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CGREF1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-202ENST00000312734 PTP4A2Q12974 167 aa28.72■■■□□ 2.19
CGREF1-202ENST00000312734 KIAA1328Q86T90 577 aa28.72■■■□□ 2.19
CGREF1-202ENST00000312734 SCUBE3Q8IX30 993 aa28.72■■■□□ 2.19
CGREF1-202ENST00000312734 SCAMP5Q8TAC9 235 aa28.72■■■□□ 2.19
CGREF1-202ENST00000312734 SLC22A17Q8WUG5 538 aa28.72■■■□□ 2.19
CGREF1-202ENST00000312734 THAP2Q9H0W7 228 aa28.72■■■□□ 2.19
CGREF1-202ENST00000312734 IGFLR1Q9H665 355 aa28.72■■■□□ 2.19
CGREF1-202ENST00000312734 LUC7LQ9NQ29 371 aaKnown RBP28.72■■■□□ 2.19
CGREF1-202ENST00000312734 CHORDC1Q9UHD1 332 aaPredicted RBP28.72■■■□□ 2.19
CGREF1-202ENST00000312734 INSL5Q9Y5Q6 135 aa28.72■■■□□ 2.19
CGREF1-202ENST00000312734 MYO9BQ13459 2157 aa28.71■■■□□ 2.19
CGREF1-202ENST00000312734 GTF2F1P35269 517 aaKnown RBP eCLIP28.71■■■□□ 2.19
CGREF1-202ENST00000312734 ACADSBP45954 432 aa28.71■■■□□ 2.19
CGREF1-202ENST00000312734 TKTL1P51854 596 aa28.71■■■□□ 2.19
CGREF1-202ENST00000312734 C1QBPQ07021 282 aaKnown RBP28.71■■■□□ 2.19
CGREF1-202ENST00000312734 TWF1Q12792 350 aa28.71■■■□□ 2.19
CGREF1-202ENST00000312734 HS1BP3Q53T59 392 aa28.71■■■□□ 2.19
CGREF1-202ENST00000312734 PNPLA8Q9NP80 782 aa28.71■■■□□ 2.19
CGREF1-202ENST00000312734 MYO1AQ9UBC5 1043 aa28.71■■■□□ 2.19
CGREF1-202ENST00000312734 TRANK1O15050 2925 aa28.71■■■□□ 2.19
CGREF1-202ENST00000312734 PLXNA3P51805 1871 aa28.7■■■□□ 2.19
CGREF1-202ENST00000312734 A0A0U1RQJ8 604 aa28.7■■■□□ 2.19
CGREF1-202ENST00000312734 ANKRD62A6NC57 917 aa28.7■■■□□ 2.19
CGREF1-202ENST00000312734 ATMINO43313 823 aaPredicted RBP28.7■■■□□ 2.19
CGREF1-202ENST00000312734 CALB1P05937 261 aa28.7■■■□□ 2.19
CGREF1-202ENST00000312734 C8AP07357 584 aa28.7■■■□□ 2.19
CGREF1-202ENST00000312734 GABRB2P47870 512 aa28.7■■■□□ 2.19
CGREF1-202ENST00000312734 RPL34P49207 117 aaKnown RBP28.7■■■□□ 2.19
CGREF1-202ENST00000312734 SLC5A3P53794 718 aa28.7■■■□□ 2.19
CGREF1-202ENST00000312734 DUSP6Q16828 381 aa28.7■■■□□ 2.19
CGREF1-202ENST00000312734 LIN9Q5TKA1 542 aa28.7■■■□□ 2.19
CGREF1-202ENST00000312734 OR6B2Q6IFH4 312 aa28.7■■■□□ 2.19
CGREF1-202ENST00000312734 NUP93Q8N1F7 819 aa28.7■■■□□ 2.19
CGREF1-202ENST00000312734 ATRIPQ8WXE1 791 aa28.7■■■□□ 2.19
CGREF1-202ENST00000312734 NDRG1Q92597 394 aaKnown RBP28.7■■■□□ 2.19
CGREF1-202ENST00000312734 ZNF653Q96CK0 615 aa28.7■■■□□ 2.19
CGREF1-202ENST00000312734 MAN1C1Q9NR34 630 aa28.7■■■□□ 2.19
CGREF1-202ENST00000312734 HCFC2Q9Y5Z7 792 aa28.7■■■□□ 2.19
CGREF1-202ENST00000312734 RCCD1A6NED2 376 aa28.69■■■□□ 2.18
CGREF1-202ENST00000312734 TNFRSF10BO14763 440 aa28.69■■■□□ 2.18
CGREF1-202ENST00000312734 CCDC175P0C221 793 aa28.69■■■□□ 2.18
CGREF1-202ENST00000312734 RRM1P23921 792 aa28.69■■■□□ 2.18
CGREF1-202ENST00000312734 SNX16P57768 344 aa28.69■■■□□ 2.18
CGREF1-202ENST00000312734 RBM10P98175 930 aaKnown RBP28.69■■■□□ 2.18
CGREF1-202ENST00000312734 MTMR3Q13615 1198 aa28.69■■■□□ 2.18
CGREF1-202ENST00000312734 RAB41Q5JT25 222 aa28.69■■■□□ 2.18
CGREF1-202ENST00000312734 CCDC149Q6ZUS6 474 aa28.69■■■□□ 2.18
CGREF1-202ENST00000312734 SIX6OS1Q8N1H7 587 aa28.69■■■□□ 2.18
CGREF1-202ENST00000312734 VCPIP1Q96JH7 1222 aa28.69■■■□□ 2.18
CGREF1-202ENST00000312734 SPATA17Q96L03 361 aa28.69■■■□□ 2.18
CGREF1-202ENST00000312734 NSUN3Q9H649 340 aaKnown RBP28.69■■■□□ 2.18
CGREF1-202ENST00000312734 CYLDQ9NQC7 956 aa28.69■■■□□ 2.18
CGREF1-202ENST00000312734 ATG2AQ2TAZ0 1938 aa28.69■■■□□ 2.18
CGREF1-202ENST00000312734 VAV2P52735 878 aa28.69■■■□□ 2.18
CGREF1-202ENST00000312734 DENND5BQ6ZUT9 1274 aa28.69■■■□□ 2.18
CGREF1-202ENST00000312734 XYLT1Q86Y38 959 aa28.69■■■□□ 2.18
CGREF1-202ENST00000312734 CLEC4CQ8WTT0 213 aa28.69■■■□□ 2.18
CGREF1-202ENST00000312734 CTNNBL1Q8WYA6 563 aaPredicted RBP28.69■■■□□ 2.18
CGREF1-202ENST00000312734 PPP2R3CQ969Q6 453 aa28.69■■■□□ 2.18
CGREF1-202ENST00000312734 ULBP1Q9BZM6 244 aa28.69■■■□□ 2.18
CGREF1-202ENST00000312734 CNOT8Q9UFF9 292 aaKnown RBP28.69■■■□□ 2.18
CGREF1-202ENST00000312734 PPP2R2CQ9Y2T4 447 aa28.69■■■□□ 2.18
CGREF1-202ENST00000312734 SLC38A8A6NNN8 435 aa28.68■■■□□ 2.18
CGREF1-202ENST00000312734 GOLGA8SH3BPF8 625 aa28.68■■■□□ 2.18
CGREF1-202ENST00000312734 PAPSS1O43252 624 aaPredicted RBP28.68■■■□□ 2.18
CGREF1-202ENST00000312734 USP17L7P0C7H9 530 aa28.68■■■□□ 2.18
CGREF1-202ENST00000312734 GPC5P78333 572 aa28.68■■■□□ 2.18
CGREF1-202ENST00000312734 TCEAL5Q5H9L2 206 aa28.68■■■□□ 2.18
CGREF1-202ENST00000312734 FAM183BPQ6ZVS7 135 aa28.68■■■□□ 2.18
CGREF1-202ENST00000312734 ARHGEF26Q96DR7 871 aa28.68■■■□□ 2.18
CGREF1-202ENST00000312734 PLEKHA4Q9H4M7 779 aa28.68■■■□□ 2.18
CGREF1-202ENST00000312734 MAGED2Q9UNF1 606 aaPredicted RBP28.68■■■□□ 2.18
CGREF1-202ENST00000312734 LRG1P02750 347 aa28.67■■■□□ 2.18
CGREF1-202ENST00000312734 USP46P62068 366 aa28.67■■■□□ 2.18
CGREF1-202ENST00000312734 TRIM11Q96F44 468 aa28.67■■■□□ 2.18
CGREF1-202ENST00000312734 STRIP2Q9ULQ0 834 aa28.67■■■□□ 2.18
CGREF1-202ENST00000312734 C1RP00736 705 aa28.66■■■□□ 2.18
CGREF1-202ENST00000312734 TMEM253P0C7T8 217 aa28.66■■■□□ 2.18
CGREF1-202ENST00000312734 IGFBP4P22692 258 aa28.66■■■□□ 2.18
CGREF1-202ENST00000312734 EPHB3P54753 998 aa28.66■■■□□ 2.18
CGREF1-202ENST00000312734 ADGRE1Q14246 886 aa28.66■■■□□ 2.18
CGREF1-202ENST00000312734 ZNF268Q14587 947 aaPredicted RBP28.66■■■□□ 2.18
CGREF1-202ENST00000312734 PPM1LQ5SGD2 360 aa28.66■■■□□ 2.18
CGREF1-202ENST00000312734 LACRTQ9GZZ8 138 aa28.66■■■□□ 2.18
CGREF1-202ENST00000312734 TRMT1Q9NXH9 659 aaKnown RBP28.66■■■□□ 2.18
CGREF1-202ENST00000312734 LMCD1Q9NZU5 365 aa28.66■■■□□ 2.18
CGREF1-202ENST00000312734 INTUQ9ULD6 942 aa28.66■■■□□ 2.18
CGREF1-202ENST00000312734 SPDYE4A6NLX3 237 aa28.65■■■□□ 2.18
CGREF1-202ENST00000312734 RFPL2O75678 378 aa28.65■■■□□ 2.18
CGREF1-202ENST00000312734 GJB6O95452 261 aa28.65■■■□□ 2.18
CGREF1-202ENST00000312734 MYBL1P10243 752 aa28.65■■■□□ 2.18
CGREF1-202ENST00000312734 VEPH1Q14D04 833 aa28.65■■■□□ 2.18
CGREF1-202ENST00000312734 TAF12Q16514 161 aa28.65■■■□□ 2.18
CGREF1-202ENST00000312734 PIWIL1Q96J94 861 aaKnown RBP28.65■■■□□ 2.18
CGREF1-202ENST00000312734 USP3Q9Y6I4 520 aa28.65■■■□□ 2.18
CGREF1-202ENST00000312734 ZBED1O96006 694 aa28.65■■■□□ 2.18
CGREF1-202ENST00000312734 PLD1Q13393 1074 aa28.65■■■□□ 2.18
CGREF1-202ENST00000312734 MCRS1Q96EZ8 462 aa28.65■■■□□ 2.18
CGREF1-202ENST00000312734 CDCA3Q99618 268 aaPredicted RBP28.65■■■□□ 2.18
CGREF1-202ENST00000312734 CNGB3Q9NQW8 809 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms