RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 ASNSD1Q9NWL6 643 aa23.67■■□□□ 1.38
IRF3-201ENST00000309877 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.67■■□□□ 1.38
IRF3-201ENST00000309877 V9GYY5 206 aaPredicted RBP23.67■■□□□ 1.38
IRF3-201ENST00000309877 C2CD4BA6NLJ0 364 aa23.66■■□□□ 1.38
IRF3-201ENST00000309877 PGRMC1O00264 195 aaKnown RBP23.66■■□□□ 1.38
IRF3-201ENST00000309877 DESP17661 470 aa23.66■■□□□ 1.38
IRF3-201ENST00000309877 TKTL1P51854 596 aa23.66■■□□□ 1.38
IRF3-201ENST00000309877 RABGGTBP53611 331 aa23.66■■□□□ 1.38
IRF3-201ENST00000309877 TAS2R40P59535 323 aa23.66■■□□□ 1.38
IRF3-201ENST00000309877 TUBB4BP68371 445 aa23.66■■□□□ 1.38
IRF3-201ENST00000309877 ZNF211Q13398 564 aaPredicted RBP23.66■■□□□ 1.38
IRF3-201ENST00000309877 ACAP1Q15027 740 aa23.66■■□□□ 1.38
IRF3-201ENST00000309877 USP41Q3LFD5 358 aa23.66■■□□□ 1.38
IRF3-201ENST00000309877 EFHC1Q5JVL4 640 aa23.66■■□□□ 1.38
IRF3-201ENST00000309877 RTP2Q5QGT7 225 aa23.66■■□□□ 1.38
IRF3-201ENST00000309877 SEL1L2Q5TEA6 688 aa23.66■■□□□ 1.38
IRF3-201ENST00000309877 PSRC1Q6PGN9 363 aaPredicted RBP23.66■■□□□ 1.38
IRF3-201ENST00000309877 TAS1R1Q7RTX1 841 aa23.66■■□□□ 1.38
IRF3-201ENST00000309877 ZNF572Q7Z3I7 529 aaPredicted RBP23.66■■□□□ 1.38
IRF3-201ENST00000309877 RASGEF1CQ8N431 466 aa23.66■■□□□ 1.38
IRF3-201ENST00000309877 RNPC3Q96LT9 517 aaKnown RBP23.66■■□□□ 1.38
IRF3-201ENST00000309877 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.66■■□□□ 1.381e-10■■□□□ 11.4
IRF3-201ENST00000309877 PLVAPQ9BX97 442 aa23.66■■□□□ 1.38
IRF3-201ENST00000309877 OXCT2Q9BYC2 517 aaPredicted RBP23.66■■□□□ 1.38
IRF3-201ENST00000309877 MRPL42Q9Y6G3 142 aaKnown RBP23.66■■□□□ 1.38
IRF3-201ENST00000309877 RNF8O76064 485 aa23.65■■□□□ 1.38
IRF3-201ENST00000309877 FBXO21O94952 628 aa23.65■■□□□ 1.38
IRF3-201ENST00000309877 FLT3P36888 993 aa23.65■■□□□ 1.38
IRF3-201ENST00000309877 TEX35Q5T0J7 233 aa23.65■■□□□ 1.38
IRF3-201ENST00000309877 CNPY3Q9BT09 278 aa23.65■■□□□ 1.38
IRF3-201ENST00000309877 TMEM30AQ9NV96 361 aa23.65■■□□□ 1.38
IRF3-201ENST00000309877 ABI2Q9NYB9 513 aaPredicted RBP23.65■■□□□ 1.38
IRF3-201ENST00000309877 SYN1P17600 705 aa23.64■■□□□ 1.38
IRF3-201ENST00000309877 GJC1P36383 396 aa23.64■■□□□ 1.38
IRF3-201ENST00000309877 GRIK1P39086 918 aa23.64■■□□□ 1.38
IRF3-201ENST00000309877 ARPP19P56211 112 aa23.64■■□□□ 1.38
IRF3-201ENST00000309877 MRPS5P82675 430 aaKnown RBP23.64■■□□□ 1.38
IRF3-201ENST00000309877 CLUL1Q15846 466 aa23.64■■□□□ 1.38
IRF3-201ENST00000309877 HADHQ16836 314 aaKnown RBP23.64■■□□□ 1.38
IRF3-201ENST00000309877 TMEM240Q5SV17 173 aa23.64■■□□□ 1.38
IRF3-201ENST00000309877 SPATA4Q8NEY3 305 aa23.64■■□□□ 1.38
IRF3-201ENST00000309877 KHSRPQ92945 711 aaKnown RBP eCLIP23.64■■□□□ 1.38
IRF3-201ENST00000309877 TMEM169Q96HH4 297 aa23.64■■□□□ 1.38
IRF3-201ENST00000309877 ZBED2Q9BTP6 218 aa23.64■■□□□ 1.38
IRF3-201ENST00000309877 TTC7AQ9ULT0 858 aaPredicted RBP23.64■■□□□ 1.38
IRF3-201ENST00000309877 PCDHB5Q9Y5E4 795 aa23.64■■□□□ 1.38
IRF3-201ENST00000309877 COL4A6Q14031 1691 aa23.64■■□□□ 1.37
IRF3-201ENST00000309877 HHLA1C9JL84 531 aa23.64■■□□□ 1.37
IRF3-201ENST00000309877 CPB1P15086 417 aa23.64■■□□□ 1.37
IRF3-201ENST00000309877 CYP2F1P24903 491 aa23.64■■□□□ 1.37
IRF3-201ENST00000309877 SDC4P31431 198 aa23.64■■□□□ 1.37
IRF3-201ENST00000309877 NDUFV1P49821 464 aa23.64■■□□□ 1.37
IRF3-201ENST00000309877 EPHB4P54760 987 aa23.64■■□□□ 1.37
IRF3-201ENST00000309877 ADCY1Q08828 1119 aa23.64■■□□□ 1.37
IRF3-201ENST00000309877 RAB41Q5JT25 222 aa23.64■■□□□ 1.37
IRF3-201ENST00000309877 ZFYVE27Q5T4F4 411 aa23.64■■□□□ 1.37
IRF3-201ENST00000309877 KIAA1841Q6NSI8 718 aa23.64■■□□□ 1.37
IRF3-201ENST00000309877 RSRC2Q7L4I2 434 aaKnown RBP23.64■■□□□ 1.37
IRF3-201ENST00000309877 ARCQ7LC44 396 aa23.64■■□□□ 1.37
IRF3-201ENST00000309877 COLGALT1Q8NBJ5 622 aa23.64■■□□□ 1.37
IRF3-201ENST00000309877 FUBP3Q96I24 572 aaKnown RBP eCLIP23.64■■□□□ 1.37
IRF3-201ENST00000309877 NAP1L3Q99457 506 aaPredicted RBP23.64■■□□□ 1.37
IRF3-201ENST00000309877 PNPLA8Q9NP80 782 aa23.64■■□□□ 1.37
IRF3-201ENST00000309877 CNGB3Q9NQW8 809 aa23.64■■□□□ 1.37
IRF3-201ENST00000309877 SPG21Q9NZD8 308 aa23.64■■□□□ 1.37
IRF3-201ENST00000309877 DPYSL4O14531 572 aa23.63■■□□□ 1.37
IRF3-201ENST00000309877 FGGP02679 453 aa23.63■■□□□ 1.37
IRF3-201ENST00000309877 PYGMP11217 842 aa23.63■■□□□ 1.37
IRF3-201ENST00000309877 ITIH3Q06033 890 aa23.63■■□□□ 1.37
IRF3-201ENST00000309877 C2orf54Q08AI8 447 aa23.63■■□□□ 1.37
IRF3-201ENST00000309877 LONRF2Q1L5Z9 754 aa23.63■■□□□ 1.37
IRF3-201ENST00000309877 ERCC6LQ2NKX8 1250 aa23.63■■□□□ 1.37
IRF3-201ENST00000309877 LRRC38Q5VT99 294 aa23.63■■□□□ 1.37
IRF3-201ENST00000309877 TRNP1Q6NT89 227 aa23.63■■□□□ 1.37
IRF3-201ENST00000309877 GPRIN1Q7Z2K8 1008 aa23.63■■□□□ 1.37
IRF3-201ENST00000309877 SLC39A11Q8N1S5 342 aa23.63■■□□□ 1.37
IRF3-201ENST00000309877 RIN2Q8WYP3 895 aaPredicted RBP23.63■■□□□ 1.37
IRF3-201ENST00000309877 FAM149B1Q96BN6 582 aa23.63■■□□□ 1.37
IRF3-201ENST00000309877 ULBP1Q9BZM6 244 aa23.63■■□□□ 1.37
IRF3-201ENST00000309877 SART1O43290 800 aaKnown RBP23.62■■□□□ 1.37
IRF3-201ENST00000309877 HSF2BPO75031 334 aa23.62■■□□□ 1.37
IRF3-201ENST00000309877 LRCH4O75427 683 aa23.62■■□□□ 1.37
IRF3-201ENST00000309877 GJB5O95377 273 aa23.62■■□□□ 1.37
IRF3-201ENST00000309877 EFEMP2O95967 443 aa23.62■■□□□ 1.37
IRF3-201ENST00000309877 NAA30Q147X3 362 aaPredicted RBP23.62■■□□□ 1.37
IRF3-201ENST00000309877 CCDC14Q49A88 953 aa23.62■■□□□ 1.37
IRF3-201ENST00000309877 PRSS55Q6UWB4 352 aaPredicted RBP23.62■■□□□ 1.37
IRF3-201ENST00000309877 SCN4BQ8IWT1 228 aa23.62■■□□□ 1.37
IRF3-201ENST00000309877 KATNAL2Q8IYT4 538 aa23.62■■□□□ 1.37
IRF3-201ENST00000309877 NDRG1Q92597 394 aaKnown RBP23.62■■□□□ 1.37
IRF3-201ENST00000309877 CFAP57Q96MR6 1250 aa23.62■■□□□ 1.37
IRF3-201ENST00000309877 AAASQ9NRG9 546 aa23.62■■□□□ 1.37
IRF3-201ENST00000309877 ZMYND8Q9ULU4 1186 aaPredicted RBP23.62■■□□□ 1.37
IRF3-201ENST00000309877 ALPK3Q96L96 1907 aa23.62■■□□□ 1.37
IRF3-201ENST00000309877 TBC1D4O60343 1298 aa23.61■■□□□ 1.37
IRF3-201ENST00000309877 TCF4P15884 667 aa23.61■■□□□ 1.37
IRF3-201ENST00000309877 SMARCB1Q12824 385 aa23.61■■□□□ 1.37
IRF3-201ENST00000309877 ODF2Q5BJF6 829 aa23.61■■□□□ 1.37
IRF3-201ENST00000309877 AADACL2Q6P093 401 aa23.61■■□□□ 1.37
IRF3-201ENST00000309877 PGLYRP2Q96PD5 576 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms