RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 PIWIL1Q96J94 861 aaKnown RBP18.41■□□□□ 0.54
KRT28-201ENST00000306658 KCNK16Q96T55 309 aa18.41■□□□□ 0.54
KRT28-201ENST00000306658 DMAP1Q9NPF5 467 aaPredicted RBP18.41■□□□□ 0.54
KRT28-201ENST00000306658 GRAP2O75791 330 aa18.4■□□□□ 0.54
KRT28-201ENST00000306658 PYGMP11217 842 aa18.4■□□□□ 0.54
KRT28-201ENST00000306658 TKTL1P51854 596 aa18.4■□□□□ 0.54
KRT28-201ENST00000306658 CDR1P51861 262 aa18.4■□□□□ 0.54
KRT28-201ENST00000306658 TAS2R40P59535 323 aa18.4■□□□□ 0.54
KRT28-201ENST00000306658 BTG3Q14201 252 aaPredicted RBP18.4■□□□□ 0.54
KRT28-201ENST00000306658 NAA30Q147X3 362 aaPredicted RBP18.4■□□□□ 0.54
KRT28-201ENST00000306658 LONRF2Q1L5Z9 754 aa18.4■□□□□ 0.54
KRT28-201ENST00000306658 SLC39A12Q504Y0 691 aa18.4■□□□□ 0.54
KRT28-201ENST00000306658 DAB2IPQ5VWQ8 1189 aa18.4■□□□□ 0.54
KRT28-201ENST00000306658 CCDC70Q6NSX1 233 aa18.4■□□□□ 0.54
KRT28-201ENST00000306658 ANKS3Q6ZW76 656 aa18.4■□□□□ 0.54
KRT28-201ENST00000306658 KATNAL2Q8IYT4 538 aa18.4■□□□□ 0.54
KRT28-201ENST00000306658 NCAPGQ9BPX3 1015 aa18.4■□□□□ 0.54
KRT28-201ENST00000306658 TTPALQ9BTX7 342 aa18.4■□□□□ 0.54
KRT28-201ENST00000306658 SART1O43290 800 aaKnown RBP18.39■□□□□ 0.53
KRT28-201ENST00000306658 SDC4P31431 198 aa18.39■□□□□ 0.53
KRT28-201ENST00000306658 FLT3P36888 993 aa18.39■□□□□ 0.53
KRT28-201ENST00000306658 MRPS5P82675 430 aaKnown RBP18.39■□□□□ 0.53
KRT28-201ENST00000306658 C2orf54Q08AI8 447 aa18.39■□□□□ 0.53
KRT28-201ENST00000306658 TAF5Q15542 800 aa18.39■□□□□ 0.53
KRT28-201ENST00000306658 ELF2Q15723 593 aa18.39■□□□□ 0.53
KRT28-201ENST00000306658 RAB41Q5JT25 222 aa18.39■□□□□ 0.53
KRT28-201ENST00000306658 KCNT2Q6UVM3 1135 aa18.39■□□□□ 0.53
KRT28-201ENST00000306658 MMGT1Q8N4V1 131 aa18.39■□□□□ 0.53
KRT28-201ENST00000306658 GPR161Q8N6U8 529 aaKnown RBP18.39■□□□□ 0.53
KRT28-201ENST00000306658 NOA1Q8NC60 698 aaKnown RBP18.39■□□□□ 0.53
KRT28-201ENST00000306658 ZMIZ2Q8NF64 920 aa18.39■□□□□ 0.53
KRT28-201ENST00000306658 BADQ92934 168 aa18.39■□□□□ 0.53
KRT28-201ENST00000306658 KHSRPQ92945 711 aaKnown RBP eCLIP18.39■□□□□ 0.53
KRT28-201ENST00000306658 FUBP3Q96I24 572 aaKnown RBP eCLIP18.39■□□□□ 0.53
KRT28-201ENST00000306658 IGSF21Q96ID5 467 aa18.39■□□□□ 0.53
KRT28-201ENST00000306658 ZNF558Q96NG5 402 aa18.39■□□□□ 0.53
KRT28-201ENST00000306658 RC3H2Q9HBD1 1191 aaKnown RBP18.39■□□□□ 0.53
KRT28-201ENST00000306658 PNPLA8Q9NP80 782 aa18.39■□□□□ 0.53
KRT28-201ENST00000306658 MKI67P46013 3256 aaKnown RBP18.39■□□□□ 0.53
KRT28-201ENST00000306658 VWA8A3KMH1 1905 aa18.39■□□□□ 0.53
KRT28-201ENST00000306658 ZBBXA8MT70 800 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 KRIT1O00522 736 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 DPYSL4O14531 572 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 HSF2BPO75031 334 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 LRCH4O75427 683 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 ZRANB2O95218 330 aaKnown RBP eCLIP18.38■□□□□ 0.53
KRT28-201ENST00000306658 GLI1P08151 1106 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 KRT7P08729 469 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 PCK1P35558 622 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 CETN2P41208 172 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 CACNA2D1P54289 1103 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 USP41Q3LFD5 358 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 ODF2Q5BJF6 829 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 C16orf59Q7L2K0 433 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 POLNQ7Z5Q5 900 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 TMCO2Q7Z6W1 182 aaPredicted RBP18.38■□□□□ 0.53
KRT28-201ENST00000306658 TMEM173Q86WV6 379 aaPredicted RBP18.38■□□□□ 0.53
KRT28-201ENST00000306658 EXD1Q8NHP7 514 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 CLEC4CQ8WTT0 213 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 TSC1Q92574 1164 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 YME1L1Q96TA2 773 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 RHOBTB2Q9BYZ6 727 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 CNGB3Q9NQW8 809 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 DDX56Q9NY93 547 aaKnown RBP18.38■□□□□ 0.53
KRT28-201ENST00000306658 HHLA1C9JL84 531 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 CCDC188H7C350 402 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 OR4Q2P0C623 313 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 LAG3P18627 525 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 YWHAZP63104 245 aaKnown RBP18.38■□□□□ 0.53
KRT28-201ENST00000306658 SMARCB1Q12824 385 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 CCDC14Q49A88 953 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 ZFYVE27Q5T4F4 411 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 ZNF365Q70YC5 407 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 RCOR2Q8IZ40 523 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 BCL7CQ8WUZ0 217 aaPredicted RBP18.38■□□□□ 0.53
KRT28-201ENST00000306658 FAM149B1Q96BN6 582 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 B3GALT6Q96L58 329 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 RBM12Q9NTZ6 932 aaKnown RBP18.38■□□□□ 0.53
KRT28-201ENST00000306658 TMEM30AQ9NV96 361 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 PCDHB5Q9Y5E4 795 aa18.38■□□□□ 0.53
KRT28-201ENST00000306658 GOLGA6L10A0A0M3HER8 536 aa18.37■□□□□ 0.53
KRT28-201ENST00000306658 GJC1P36383 396 aa18.37■□□□□ 0.53
KRT28-201ENST00000306658 GRIK1P39086 918 aa18.37■□□□□ 0.53
KRT28-201ENST00000306658 PTPN9P43378 593 aa18.37■□□□□ 0.53
KRT28-201ENST00000306658 NDUFV1P49821 464 aa18.37■□□□□ 0.53
KRT28-201ENST00000306658 ADCY1Q08828 1119 aa18.37■□□□□ 0.53
KRT28-201ENST00000306658 RTP2Q5QGT7 225 aa18.37■□□□□ 0.53
KRT28-201ENST00000306658 TRNP1Q6NT89 227 aa18.37■□□□□ 0.53
KRT28-201ENST00000306658 PSRC1Q6PGN9 363 aaPredicted RBP18.37■□□□□ 0.53
KRT28-201ENST00000306658 VSTM1Q6UX27 236 aa18.37■□□□□ 0.53
KRT28-201ENST00000306658 C7orf61Q8IZ16 206 aa18.37■□□□□ 0.53
KRT28-201ENST00000306658 ARFGAP1Q8N6T3 406 aa18.37■□□□□ 0.53
KRT28-201ENST00000306658 RBM41Q96IZ5 413 aaKnown RBP18.37■□□□□ 0.53
KRT28-201ENST00000306658 CFAP57Q96MR6 1250 aa18.37■□□□□ 0.53
KRT28-201ENST00000306658 ABI2Q9NYB9 513 aaPredicted RBP18.37■□□□□ 0.53
KRT28-201ENST00000306658 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.37■□□□□ 0.53
KRT28-201ENST00000306658 PTPRDP23468 1912 aa18.36■□□□□ 0.53
KRT28-201ENST00000306658 COL4A6Q14031 1691 aa18.36■□□□□ 0.53
KRT28-201ENST00000306658 EFEMP2O95967 443 aa18.36■□□□□ 0.53
KRT28-201ENST00000306658 ZBED1O96006 694 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms