RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 GSTM1P09488 218 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 CRYMQ14894 314 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 KHDRBS2Q5VWX1 349 aaKnown RBP16.67■□□□□ 0.26
SSRP1-202ENST00000293880 ATG9AQ7Z3C6 839 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 DEPDC7Q96QD5 511 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 NT5C1AQ9BXI3 368 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 ABI2Q9NYB9 513 aaPredicted RBP16.67■□□□□ 0.26
SSRP1-202ENST00000293880 DCDC2Q9UHG0 476 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 TRMT6Q9UJA5 497 aaKnown RBP16.67■□□□□ 0.26
SSRP1-202ENST00000293880 LSM7Q9UK45 103 aaKnown RBP16.67■□□□□ 0.26
SSRP1-202ENST00000293880 PCDHB8Q9UN66 801 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 HNRNPRO43390 633 aaKnown RBP16.67■□□□□ 0.26
SSRP1-202ENST00000293880 EXTL3O43909 919 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 BNC2Q6ZN30 1099 aaPredicted RBP16.67■□□□□ 0.26
SSRP1-202ENST00000293880 PAIP1Q9H074 479 aaKnown RBP16.67■□□□□ 0.26
SSRP1-202ENST00000293880 SPON1Q9HCB6 807 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 TMEM8AQ9HCN3 771 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 ZMYND8Q9ULU4 1186 aaPredicted RBP16.67■□□□□ 0.26
SSRP1-202ENST00000293880 CDHR2Q9BYE9 1310 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 M0QYT0 321 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 ITGB6P18564 788 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 FGFR3P22607 806 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 ITIH4Q14624 930 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 ZSWIM7Q19AV6 140 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 MMGT1Q8N4V1 131 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 MCRS1Q96EZ8 462 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 SEMA6AQ9H2E6 1030 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 RSAD1Q9HA92 442 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 SCUBE2Q9NQ36 999 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 UBP1Q9NZI7 540 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 PREX2Q70Z35 1606 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 ABCC3O15438 1527 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 H3BQF6 201 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 ALOX15P16050 662 aaPredicted RBP16.67■□□□□ 0.26
SSRP1-202ENST00000293880 HERVK_113P62684 666 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 TP53BP2Q13625 1128 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 ARHGEF40Q8TER5 1519 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 CPSF1Q10570 1443 aaKnown RBP16.67■□□□□ 0.26
SSRP1-202ENST00000293880 A0A1W2PQJ5 194 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 ITGA4P13612 1032 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 PDIA5Q14554 519 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 CCDC157Q569K6 752 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 COL23A1Q86Y22 540 aaPredicted RBP16.67■□□□□ 0.26
SSRP1-202ENST00000293880 SEPHS2Q99611 448 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 TMEM121Q9BTD3 319 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 PDP2Q9P2J9 529 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 KLHL20Q9Y2M5 609 aa16.67■□□□□ 0.26
SSRP1-202ENST00000293880 SHROOM2Q13796 1616 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 SLC37A4O43826 429 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 FGFR2P21802 821 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 FNTAP49354 379 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 PTK6Q13882 451 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 KYAT1Q16773 422 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 ACAD10Q6JQN1 1059 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 LRRC8DQ7L1W4 858 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 FIG4Q92562 907 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 SERPINB12Q96P63 405 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 SPATA16Q9BXB7 569 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 ILKAPQ9H0C8 392 aaPredicted RBP16.66■□□□□ 0.26
SSRP1-202ENST00000293880 NARFQ9UHQ1 456 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 S100A9P06702 114 aaKnown RBP16.66■□□□□ 0.26
SSRP1-202ENST00000293880 ACADSP16219 412 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 RPL10AP62906 217 aaKnown RBP16.66■□□□□ 0.26
SSRP1-202ENST00000293880 SHROOM1Q2M3G4 852 aaPredicted RBP16.66■□□□□ 0.26
SSRP1-202ENST00000293880 ERAP2Q6P179 960 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 HASPINQ8TF76 798 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 NSUN4Q96CB9 384 aaKnown RBP16.66■□□□□ 0.26
SSRP1-202ENST00000293880 ZNF333Q96JL9 665 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 SSU72P8A0A1W2PR75 194 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 LSM1O15116 133 aaKnown RBP16.66■□□□□ 0.26
SSRP1-202ENST00000293880 NDUFB5O43674 189 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 RBP3P10745 1247 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 IL5RAQ01344 420 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 TRIM32Q13049 653 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 ZSCAN18Q8TBC5 510 aaPredicted RBP16.66■□□□□ 0.26
SSRP1-202ENST00000293880 LRRC39Q96DD0 335 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 DSEQ9UL01 958 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 JCADQ9P266 1359 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 RASA2Q15283 850 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 TTC39CQ8N584 583 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 MYCBPAPQ8TBZ2 947 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 PSMB9P28065 219 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 RGS4P49798 205 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 CNGA2Q16280 664 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 SV2CQ496J9 727 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 CACHD1Q5VU97 1274 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 NT5DC3Q86UY8 548 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 SGMS1Q86VZ5 419 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 CARNMT1Q8N4J0 409 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 B3GALNT2Q8NCR0 500 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 RDM1Q8NG50 284 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 HPDLQ96IR7 371 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 CCSER1Q9C0I3 900 aa16.66■□□□□ 0.26
SSRP1-202ENST00000293880 KATNA1O75449 491 aa16.65■□□□□ 0.26
SSRP1-202ENST00000293880 PON1P27169 355 aa16.65■□□□□ 0.26
SSRP1-202ENST00000293880 HSPA13P48723 471 aa16.65■□□□□ 0.26
SSRP1-202ENST00000293880 ARMCX4Q5H9R4 360 aa16.65■□□□□ 0.26
SSRP1-202ENST00000293880 SCARA3Q6AZY7 606 aa16.65■□□□□ 0.26
SSRP1-202ENST00000293880 MPP6Q9NZW5 540 aa16.65■□□□□ 0.26
SSRP1-202ENST00000293880 POLG2Q9UHN1 485 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms