RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 COL4A1P02462 1669 aa19.04■□□□□ 0.64
PTPN12-201ENST00000248594 CLUHO75153 1309 aa19.04■□□□□ 0.64
PTPN12-201ENST00000248594 DENND3A2RUS2 1198 aa19.03■□□□□ 0.64
PTPN12-201ENST00000248594 CDH2P19022 906 aaPredicted RBP19.03■□□□□ 0.64
PTPN12-201ENST00000248594 ETFBP38117 255 aa19.03■□□□□ 0.64
PTPN12-201ENST00000248594 VAMP7P51809 220 aa19.03■□□□□ 0.64
PTPN12-201ENST00000248594 CCNG2Q16589 344 aa19.03■□□□□ 0.64
PTPN12-201ENST00000248594 EML3Q32P44 896 aa19.03■□□□□ 0.64
PTPN12-201ENST00000248594 C16orf46Q6P387 395 aa19.03■□□□□ 0.64
PTPN12-201ENST00000248594 POTEHQ6S545 545 aa19.03■□□□□ 0.64
PTPN12-201ENST00000248594 ANO3Q9BYT9 981 aa19.03■□□□□ 0.64
PTPN12-201ENST00000248594 DRC3Q9H069 523 aa19.03■□□□□ 0.64
PTPN12-201ENST00000248594 THEGQ9P2T0 379 aa19.03■□□□□ 0.64
PTPN12-201ENST00000248594 PCDHA1Q9Y5I3 950 aa19.03■□□□□ 0.64
PTPN12-201ENST00000248594 A8MU76 341 aa19.03■□□□□ 0.64
PTPN12-201ENST00000248594 PPP1R11O60927 126 aaPredicted RBP19.03■□□□□ 0.64
PTPN12-201ENST00000248594 ZBTB11O95625 1053 aaPredicted RBP19.03■□□□□ 0.64
PTPN12-201ENST00000248594 BTDP43251 543 aa19.03■□□□□ 0.64
PTPN12-201ENST00000248594 DPP8Q6V1X1 898 aaPredicted RBP19.03■□□□□ 0.64
PTPN12-201ENST00000248594 PPP1R10Q96QC0 940 aaKnown RBP19.03■□□□□ 0.64
PTPN12-201ENST00000248594 SLX1AQ9BQ83 275 aa19.03■□□□□ 0.64
PTPN12-201ENST00000248594 GPAMQ9HCL2 828 aa19.03■□□□□ 0.64
PTPN12-201ENST00000248594 SLC24A2Q9UI40 661 aa19.03■□□□□ 0.64
PTPN12-201ENST00000248594 CDH22Q9UJ99 828 aa19.03■□□□□ 0.64
PTPN12-201ENST00000248594 GIPC1O14908 333 aa19.03■□□□□ 0.64
PTPN12-201ENST00000248594 ABHD2P08910 425 aa19.03■□□□□ 0.64
PTPN12-201ENST00000248594 ATP2A3Q93084 1043 aa19.03■□□□□ 0.64
PTPN12-201ENST00000248594 MRPS26Q9BYN8 205 aaKnown RBP19.03■□□□□ 0.64
PTPN12-201ENST00000248594 AGTPBP1Q9UPW5 1226 aa19.03■□□□□ 0.64
PTPN12-201ENST00000248594 APOBEC2Q9Y235 224 aaKnown RBP19.03■□□□□ 0.64
PTPN12-201ENST00000248594 DNAJC16Q9Y2G8 782 aa19.03■□□□□ 0.64
PTPN12-201ENST00000248594 ADAM23O75077 832 aa19.02■□□□□ 0.64
PTPN12-201ENST00000248594 AVILO75366 819 aa19.02■□□□□ 0.64
PTPN12-201ENST00000248594 STIP1P31948 543 aaKnown RBP19.02■□□□□ 0.64
PTPN12-201ENST00000248594 RARS2Q5T160 578 aaKnown RBP19.02■□□□□ 0.64
PTPN12-201ENST00000248594 MFSD7Q6UXD7 560 aa19.02■□□□□ 0.64
PTPN12-201ENST00000248594 TSPAN14Q8NG11 270 aa19.02■□□□□ 0.64
PTPN12-201ENST00000248594 KREMEN1Q96MU8 473 aa19.02■□□□□ 0.64
PTPN12-201ENST00000248594 PLGRKTQ9HBL7 147 aa19.02■□□□□ 0.64
PTPN12-201ENST00000248594 ACSS2Q9NR19 701 aa19.02■□□□□ 0.64
PTPN12-201ENST00000248594 RAB20Q9NX57 234 aa19.02■□□□□ 0.64
PTPN12-201ENST00000248594 UVRAGQ9P2Y5 699 aa19.02■□□□□ 0.64
PTPN12-201ENST00000248594 VPS51Q9UID3 782 aa19.02■□□□□ 0.64
PTPN12-201ENST00000248594 ZNF804BA4D1E1 1349 aa19.02■□□□□ 0.64
PTPN12-201ENST00000248594 TM9SF1O15321 606 aa19.02■□□□□ 0.64
PTPN12-201ENST00000248594 THRAP10827 490 aa19.02■□□□□ 0.64
PTPN12-201ENST00000248594 SLC1A1P43005 524 aa19.02■□□□□ 0.64
PTPN12-201ENST00000248594 NSFP46459 744 aaKnown RBP19.02■□□□□ 0.64
PTPN12-201ENST00000248594 HNRNPDQ14103 355 aaKnown RBP19.02■□□□□ 0.64
PTPN12-201ENST00000248594 GRM2Q14416 872 aa19.02■□□□□ 0.64
PTPN12-201ENST00000248594 SBK1Q52WX2 424 aa19.02■□□□□ 0.64
PTPN12-201ENST00000248594 DCAF6Q58WW2 860 aa19.02■□□□□ 0.64
PTPN12-201ENST00000248594 MROH9Q5TGP6 573 aa19.02■□□□□ 0.64
PTPN12-201ENST00000248594 PACS1Q6VY07 963 aa19.02■□□□□ 0.64
PTPN12-201ENST00000248594 JMJD4Q9H9V9 463 aa19.02■□□□□ 0.64
PTPN12-201ENST00000248594 COL5A2P05997 1499 aaPredicted RBP19.02■□□□□ 0.63
PTPN12-201ENST00000248594 IQANK1A0A1B0GTG1 560 aa19.02■□□□□ 0.63
PTPN12-201ENST00000248594 TCRBV7S3A2A0A539 114 aa19.02■□□□□ 0.63
PTPN12-201ENST00000248594 K7EPI3 171 aa19.02■□□□□ 0.63
PTPN12-201ENST00000248594 EML1O00423 815 aa19.02■□□□□ 0.63
PTPN12-201ENST00000248594 DCXO43602 365 aa19.02■□□□□ 0.63
PTPN12-201ENST00000248594 SPATA31C1P0DKV0 1188 aa19.02■□□□□ 0.63
PTPN12-201ENST00000248594 MX2P20592 715 aa19.02■□□□□ 0.63
PTPN12-201ENST00000248594 SMTNL2Q2TAL5 461 aa19.02■□□□□ 0.63
PTPN12-201ENST00000248594 HSF5Q4G112 596 aaPredicted RBP19.02■□□□□ 0.63
PTPN12-201ENST00000248594 ZNF276Q8N554 614 aa19.02■□□□□ 0.63
PTPN12-201ENST00000248594 ZFRQ96KR1 1074 aaKnown RBP19.02■□□□□ 0.63
PTPN12-201ENST00000248594 TIAM2Q8IVF5 1701 aa19.01■□□□□ 0.63
PTPN12-201ENST00000248594 RFC1P35251 1148 aaPredicted RBP19.01■□□□□ 0.63
PTPN12-201ENST00000248594 CARTPTQ16568 116 aa19.01■□□□□ 0.63
PTPN12-201ENST00000248594 EBF1Q9UH73 591 aa19.01■□□□□ 0.63
PTPN12-201ENST00000248594 TBC1D30Q9Y2I9 924 aa19.01■□□□□ 0.63
PTPN12-201ENST00000248594 COL14A1Q05707 1796 aaKnown RBP19.01■□□□□ 0.63
PTPN12-201ENST00000248594 E9PBE3 544 aa19.01■□□□□ 0.63
PTPN12-201ENST00000248594 KLHL41O60662 606 aa19.01■□□□□ 0.63
PTPN12-201ENST00000248594 SERPINB7O75635 380 aa19.01■□□□□ 0.63
PTPN12-201ENST00000248594 STAT2P52630 851 aa19.01■□□□□ 0.63
PTPN12-201ENST00000248594 NR1H2P55055 460 aa19.01■□□□□ 0.63
PTPN12-201ENST00000248594 RPL10AP62906 217 aaKnown RBP19.01■□□□□ 0.63
PTPN12-201ENST00000248594 CDKL1Q00532 357 aa19.01■□□□□ 0.63
PTPN12-201ENST00000248594 PQLC1Q8N2U9 271 aa19.01■□□□□ 0.63
PTPN12-201ENST00000248594 RSAD2Q8WXG1 361 aa19.01■□□□□ 0.63
PTPN12-201ENST00000248594 MAML3Q96JK9 1138 aa19.01■□□□□ 0.63
PTPN12-201ENST00000248594 EIF2AK1Q9BQI3 630 aaKnown RBP19.01■□□□□ 0.63
PTPN12-201ENST00000248594 GPATCH1Q9BRR8 931 aaKnown RBP19.01■□□□□ 0.63
PTPN12-201ENST00000248594 C20orf27Q9GZN8 174 aa19.01■□□□□ 0.63
PTPN12-201ENST00000248594 CAPN14A8MX76 684 aa19■□□□□ 0.63
PTPN12-201ENST00000248594 F5H423 210 aaPredicted RBP19■□□□□ 0.63
PTPN12-201ENST00000248594 C6orf229H3BNL8 230 aa19■□□□□ 0.63
PTPN12-201ENST00000248594 PLSCR1O15162 318 aa19■□□□□ 0.63
PTPN12-201ENST00000248594 GNPATO15228 680 aa19■□□□□ 0.63
PTPN12-201ENST00000248594 WEE2P0C1S8 567 aa19■□□□□ 0.63
PTPN12-201ENST00000248594 PHEXP78562 749 aa19■□□□□ 0.63
PTPN12-201ENST00000248594 NFX1Q12986 1120 aaKnown RBP19■□□□□ 0.63
PTPN12-201ENST00000248594 FAXCQ5TGI0 409 aa19■□□□□ 0.63
PTPN12-201ENST00000248594 ZC3H3Q8IXZ2 948 aaKnown RBP19■□□□□ 0.63
PTPN12-201ENST00000248594 DDX51Q8N8A6 666 aaKnown RBP eCLIP19■□□□□ 0.634e-8■■■□□ 16.9
PTPN12-201ENST00000248594 FAM156AQ8NDB6 213 aa19■□□□□ 0.63
PTPN12-201ENST00000248594 DDHD1Q8NEL9 900 aa19■□□□□ 0.63
PTPN12-201ENST00000248594 LRRN4Q8WUT4 740 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms