RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Gpr161B2RPY5 545 aa14.03□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Acp4D3YTS9 425 aa14.03□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Zfp358E9Q8M1 571 aa14.03□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Top6blJ3QMY9 579 aa14.03□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Cbfa2t2O70374 594 aa14.03□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Ctnnal1O88327 731 aa14.03□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Tp53i13Q5F267 385 aa14.03□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Q8BZE1 841 aa14.03□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Taf5Q8C092 801 aa14.03□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Rpa1Q8VEE4 623 aaKnown RBP14.03□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Trpm5Q9JJH7 1158 aa14.03□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Iigp1Q9QZ85 413 aa14.03□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Gm4756A0A140LIS8 335 aa14.02□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Slc6a21A0A1B0GSD2 748 aa14.02□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Wdr95D3Z7A8 784 aa14.02□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Gm5926E9PWJ8 236 aa14.02□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Zfp882E9Q4R4 555 aa14.02□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Gm3371F7CQW8 167 aa14.02□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Klhl33G3UW92 533 aa14.02□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Hoxc8P09025 242 aa14.02□□□□□ -0.16
Rnf4-204ENSMUST00000182047 RxrbP28704 520 aa14.02□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Cops2P61202 443 aaKnown RBP14.02□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Nrp1P97333 923 aa14.02□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Yy1Q00899 414 aa14.02□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Has1Q61647 583 aa14.02□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Phc1Q64028 1012 aa14.02□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Cyp2c29Q64458 490 aa14.02□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Tmc8Q7TN58 722 aa14.02□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Cd300ldQ8VCH2 221 aa14.02□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Pqbp1Q91VJ5 263 aaKnown RBP14.02□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Chchd3Q9CRB9 227 aaKnown RBP14.02□□□□□ -0.16
Rnf4-204ENSMUST00000182047 GarsQ9CZD3 729 aaKnown RBP14.02□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Bbs5Q9CZQ9 341 aa14.02□□□□□ -0.16
Rnf4-204ENSMUST00000182047 GOLGA7BQ9D428 167 aa14.02□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Iqcf1Q9D9K8 182 aa14.02□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Rnf138rt1Q9D9M9 248 aa14.02□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Wdr83Q9DAJ4 315 aaKnown RBP14.02□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Arih2Q9Z1K6 492 aa14.02□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Mzf1S4R1L6 814 aa14.02□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Lipo2D3YY49 398 aa14.02□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Slc27a2O35488 620 aa14.02□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Col6a1Q04857 1025 aa14.02□□□□□ -0.17
Rnf4-204ENSMUST00000182047 2700097O09RikQ6PGK3 301 aa14.02□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Fam102aQ78T81 392 aa14.02□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Btbd9Q8C726 612 aa14.02□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Uba6Q8C7R4 1053 aa14.02□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Vmn1r203Q8R273 311 aa14.02□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Fuca1Q99LJ1 452 aa14.02□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Ttc33Q9D6K7 262 aa14.02□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Gucy1a3Q9ERL9 691 aa14.02□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Trim54Q9ERP3 366 aa14.02□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Orc3Q9JK30 715 aaKnown RBP14.02□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Ecel1Q9JMI0 775 aa14.02□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Nphs1Q9QZS7 1256 aa14.02□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Mpp2Q9WV34 552 aa14.02□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Scgb2b21A0A087WQA9 112 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Mindy4b-psA0A1W2P7H6 457 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 6030498E09RikB1AX85 169 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Zfp839E9PUU5 921 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Vmn2r55G3UWZ4 781 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Vmn2r53L7N473 806 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 EgfP01132 1217 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 TnfP06804 235 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Cyp2b9P12790 491 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 RarbP22605 482 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Ptk2P34152 1090 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Mxi1P50540 228 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Traf3Q60803 567 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Znf235Q61116 645 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Slc9a4Q8BUE1 797 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Trerf1Q8BXJ2 1205 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 4933409G03RikQ8C5U0 320 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Hsf2bpQ9D4G2 338 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Prss23Q9D6X6 382 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Fundc1Q9DB70 155 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Nr1h3Q9Z0Y9 445 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Lonrf2B2RT44 518 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Rfx8D3YU81 596 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Cd86P42082 309 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Slc1a2P43006 572 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 FaxcQ3UMF9 409 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Prl3a1Q78Y73 227 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Slitrk1Q810C1 696 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Zfp120Q8BZW4 436 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Alas1Q8VC19 642 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Olfr30Q8VGD8 315 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Q9CQC3 228 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Fam212aQ9CX62 282 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Leng1Q9DB98 261 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 ParvaQ9EPC1 372 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Gm3138K7N754 218 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Trove2O08848 538 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Banf1O54962 89 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Akr1b7P21300 316 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Rasgrf1P27671 1262 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Acsl1P41216 699 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Ect2Q07139 913 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Fam81aQ3UXZ6 364 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 Cyp4f37Q3V1F1 546 aa14.01□□□□□ -0.17
Rnf4-204ENSMUST00000182047 CochQ62507 552 aa14.01□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 33.7 ms