RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Commd10Q8JZY2 202 aa32.04■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Angel1Q8VCU0 667 aa32.04■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Nle1Q8VEJ4 485 aa32.04■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Gemin2Q9CQQ4 269 aa32.04■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Rnf225Q9D7D1 332 aa32.04■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Scamp5Q9JKD3 235 aa32.04■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Col4a4Q9QZR9 1682 aa32.04■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Gad1P48318 593 aa32.04■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Foxp2P58463 714 aa32.04■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Sox9Q04887 507 aa32.04■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Q3UE31 404 aa32.04■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Sec31aQ3UPL0 1230 aaKnown RBP32.04■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Lims2Q91XD2 341 aa32.04■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Fads1Q920L1 447 aa32.04■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Rfc5Q9D0F6 339 aa32.04■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Rhox3cA2AWM0 215 aa32.03■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Tmem215A7E1Z1 235 aa32.03■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Rhox3hL7MU37 215 aa32.03■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 EomesO54839 707 aa32.03■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Hoxb8P09632 243 aa32.03■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 SrgnP13609 152 aa32.03■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Gnat1P20612 350 aa32.03■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Rhox5P52651 210 aa32.03■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Usp46P62069 366 aa32.03■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Rhox3aQ4TU90 215 aa32.03■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Sema5aQ62217 1077 aa32.03■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Neto2Q8BNJ6 525 aa32.03■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Plekhs1Q8BW88 474 aa32.03■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Taf12Q8VE65 161 aa32.03■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Q9D1F3 157 aa32.03■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Lilra6A0A0B4J1F3 663 aa32.02■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Gm5571P01639 130 aa32.02■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Hmga1P17095 107 aaKnown RBP32.02■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Stt3bQ3TDQ1 823 aa32.02■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 AticQ9CWJ9 592 aaKnown RBP32.02■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Ddit4Q9D3F7 229 aa32.02■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Klhl40Q9D783 621 aa32.02■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 IscuQ9D7P6 168 aa32.02■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Psma7Q9Z2U0 248 aa32.02■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Znf106O88466 1888 aa32.02■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Scgb2b11A0A087WR49 112 aa32.01■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Gm21293E9Q4G9 266 aa32.01■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Scgb2b19J3QM75 112 aa32.01■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Kifc3O35231 824 aa32.01■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Gabrb2P63137 512 aa32.01■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Wbp2P97765 261 aa32.01■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Smarcad1Q04692 1021 aa32.01■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Mrps31Q61733 384 aaKnown RBP32.01■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Gpr62Q80UC6 358 aa32.01■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Gpr61Q8C010 449 aa32.01■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Tmem132cQ8CEF9 1099 aa32.01■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Gfra4Q9JJT2 260 aa32.01■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 LipeP54310 759 aa32■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 YwhaqP68254 245 aaKnown RBP32■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Irf7P70434 457 aa32■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Bach2P97303 839 aa32■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 CttnQ60598 546 aaKnown RBP32■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Bdkrb1Q61125 334 aa32■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Bola2Q8BGS2 86 aa32■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Shc2Q8BMC3 573 aa32■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Q9D4A5 307 aa32■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Gm11758A2BEI6 360 aa32■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Gm11757A2BEI8 360 aa32■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Usp35M0QWN7 1009 aa32■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 CtswP56203 371 aa32■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Polr2fP61219 127 aa32■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Vcpip1Q8CDG3 1220 aa32■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Mcoln2Q8K595 566 aa32■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Kif12Q9D2Z8 642 aa32■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Ms4a14A0A087WSD2 1232 aa31.99■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Gm36028A0A0U1RPM1 299 aa31.99■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Samd1D3YXK1 519 aa31.99■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Ptp4a2O70274 167 aa31.99■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Svs3bQ8BZH8 265 aa31.99■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Ccdc73Q8CDM4 1066 aa31.99■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Ddx56Q9D0R4 546 aaKnown RBP31.99■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Nup50Q9JIH2 466 aaKnown RBP31.99■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Ctxn3Q8BXZ0 80 aa31.98■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Smg9Q9DB90 520 aa31.98■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Cpxm1Q9Z100 722 aa31.98■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Cdh23Q99PF4 3354 aa31.98■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Cyp4a12bA2A974 508 aa31.97■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 5830411N06RikB3F5L4 1112 aa31.97■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Vmn2r72D3Z4N8 856 aa31.97■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Vmn2r100E9QAZ9 850 aa31.97■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Mxi1P50540 228 aa31.97■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 UrosP51163 265 aa31.97■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 DbhQ64237 622 aa31.97■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Asic3Q6X1Y6 530 aa31.97■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Vtcn1Q7TSP5 283 aa31.97■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Cyp4a12aQ91WL5 508 aa31.97■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Pcdhb18Q91Y02 792 aa31.97■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Slc39a5Q9D856 535 aa31.97■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Fam217aQ9D9W6 419 aa31.97■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Igkv16-104A0A0B4J1I1 116 aa31.97■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Igkv5-43A0A0B4J1J2 115 aa31.97■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Sh3bp1P55194 680 aa31.97■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Tars2Q3UQ84 723 aaKnown RBP31.97■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Cep70Q6IQY5 616 aa31.97■■■□□ 2.71
Ctdnep1-201ENSMUST00000108593 Zdhhc17Q80TN5 632 aa31.97■■■□□ 2.71
Retrieved 100 of 22,080 RNA–protein pairs in 24.1 ms