RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Colgalt1Q8K297 617 aa23.99■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Tbc1d22aQ8R5A6 516 aa23.99■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Pcdhb2Q91Y00 799 aa23.99■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Cndp2Q9D1A2 475 aaKnown RBP23.99■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Xab2Q9DCD2 855 aaKnown RBP23.99■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Scgb2b20Q9JI02 112 aa23.99■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Zfp384E9Q1A5 584 aaKnown RBP23.98■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Cacna2d1O08532 1103 aa23.98■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Usp4P35123 962 aa23.98■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Nrp1P97333 923 aa23.98■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Skap2Q3UND0 358 aa23.98■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Fam102aQ78T81 392 aa23.98■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Gpr151Q7TSN6 422 aa23.98■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Npas4Q8BGD7 802 aa23.98■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Rd3Q8BRE0 195 aa23.98■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Mcrs1Q99L90 462 aa23.98■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Rpa3Q9CQ71 121 aa23.98■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Q9CQC3 228 aa23.98■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Spatc1lQ9D9W0 342 aa23.98■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Olfr1305A2AVW3 312 aa23.98■■□□□ 1.43
Upf3a-201ENSMUST00000043767 TyrobpO54885 114 aa23.98■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Gdf7P43029 461 aa23.98■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Ephb4P54761 987 aa23.98■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Fads2p1Q0VAX3 487 aa23.98■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Olfr538Q7TRT5 310 aa23.98■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Fam163bQ8BUM6 167 aa23.98■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Calcoco1Q8CGU1 691 aa23.98■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Ca12Q8CI85 354 aa23.98■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Epm2aQ9WUA5 330 aa23.98■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Gm28510A0A087WP28 240 aa23.97■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Stk10O55098 966 aa23.97■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Ctnna1P26231 906 aaKnown RBP23.97■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Npdc1Q64322 332 aa23.97■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Znf512Q69Z99 562 aa23.97■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Wdr35Q8BND3 1181 aa23.97■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Csnk1g3Q8C4X2 424 aa23.97■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Slfn5Q8CBA2 884 aa23.97■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Zbtb6Q8K088 423 aa23.97■■□□□ 1.43
Upf3a-201ENSMUST00000043767 UvragQ8K245 698 aa23.97■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Dpp3Q99KK7 738 aa23.97■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Ndufab1Q9CR21 156 aa23.97■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Klc4Q9DBS5 619 aa23.97■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Mrpl4Q9DCU6 294 aaKnown RBP23.97■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Acot1O55137 419 aa23.96■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Ighmbp2P40694 993 aa23.96■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Erlin2Q8BFZ9 340 aa23.96■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Ctage5Q8R311 779 aa23.96■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Olfr356Q8VFP5 315 aa23.96■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Slc13a3Q91Y63 600 aa23.96■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Ttc9bQ9D6E4 239 aa23.96■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Cul1Q9WTX6 776 aa23.96■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Ptgdr2Q9Z2J6 382 aa23.96■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Myh10Q61879 1976 aaKnown RBP23.96■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Slc1a1P51906 523 aa23.96■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Cfhr2Q4LDF6 332 aa23.96■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Ccdc117Q6PB51 277 aa23.96■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Cfap97Q6ZPR1 541 aa23.96■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Rassf2Q8BMS9 326 aa23.96■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Neu4Q8BZL1 478 aa23.96■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Kdm1bQ8CIG3 826 aa23.96■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Zkscan3Q91VW9 553 aa23.96■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Chordc1Q9D1P4 331 aaKnown RBP23.96■■□□□ 1.43
Upf3a-201ENSMUST00000043767 Tldc2A2ACG1 198 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 BC049352E9Q2Z6 85 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Ap1m1P35585 423 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 March5Q3KNM2 278 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Trim21Q62191 470 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Pde1cQ64338 706 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Gtf2a2Q80ZM7 109 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Smarcal1Q8BJL0 910 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Arhgef33Q8BW86 850 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Ccdc28aQ8CEI3 192 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Tada2aQ8CHV6 443 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Prrg2Q8R182 198 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Pip4k2cQ91XU3 421 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Bbox1Q924Y0 387 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Slc25a11Q9CR62 314 aaKnown RBP23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Pard3bQ9CSB4 1203 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Ebag9Q9D0V7 213 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Noxred1Q9D3S5 366 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 TheglQ9DA15 459 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Gm13212B1ASQ7 799 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Mup13L7N222 235 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 MylpfP97457 169 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Rplp2P99027 115 aaKnown RBP23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 PighQ5M9N4 188 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Papss1Q60967 624 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 E2f5Q61502 335 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Slc20a1Q61609 681 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 EfsQ64355 560 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Zic5Q7TQ40 622 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Ankrd45Q810N6 248 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Gjc2Q8BQU6 440 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 GancQ8BVW0 898 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Ythdf3Q8BYK6 585 aaKnown RBP23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 GzmnQ920S1 248 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Thap12Q9CUX1 758 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Capn9Q9D805 690 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Oxct2bQ9ESL0 520 aa23.95■■□□□ 1.42
Upf3a-201ENSMUST00000043767 Oxct2aQ9JJN4 520 aa23.95■■□□□ 1.42
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms