RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Acvrl1Q61288 502 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Strip1Q8C079 837 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Sept10Q8C650 452 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Eif2b2Q99LD9 351 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Tspan17Q9D7W4 270 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Astn1Q61137 1302 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Lilra5D3Z7A9 295 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Gm8237E9Q257 205 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Vmn2r104E9Q2J5 860 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Aknad1E9Q8N6 675 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Atf6F6VAN0 656 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Psmc3O88685 442 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Sh3pxd2aO89032 1124 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 SarsP26638 512 aaKnown RBP11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Fbln2P37889 1221 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Q3TQQ9 903 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Cyp2c29Q64458 490 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Peg10Q7TN75 958 aaKnown RBP11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 PimregQ8BFY7 231 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Plin5Q8BVZ1 463 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Dus1lQ8C2P3 475 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Ppp1r11Q8K1L5 131 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Ppp4r1Q8K2V1 951 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 PmpcbQ9CXT8 489 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Clic3Q9D7P7 237 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Doc2gQ9ESN1 387 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Kat2bQ9JHD1 813 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Gabbr1Q9WV18 960 aa11.07□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Ms4a14A0A087WSD2 1232 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Prdm11A2AGX3 565 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Clca3bE9PUL3 1044 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 E2f6O54917 272 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Pja1O55176 578 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 CblP22682 913 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Naa20P61600 178 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Cdh8P97291 799 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Zbtb14Q08376 449 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Zfp956Q3UZY6 572 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Kcnj11Q61743 390 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Lpcat4Q6NVG1 524 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Cand2Q6ZQ73 1235 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Prpf38bQ80SY5 542 aaKnown RBP11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Efr3aQ8BG67 819 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Gabra5Q8BHJ7 463 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Lin52Q8CD94 116 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Sik2Q8CFH6 931 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 CopaQ8CIE6 1224 aaKnown RBP11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Csde1Q91W50 798 aaKnown RBP11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Polr3fQ921X6 316 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Foxp3Q99JB6 429 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 MlklQ9D2Y4 472 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Scn11aQ9R053 1765 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Frmpd4A2AFR3 1320 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Heg1E9Q7X6 1337 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Gm13941A2AJ38 245 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 YwhahP68510 246 aaKnown RBP11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Smad5P97454 465 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Pih1d3Q3KNI6 218 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Orai3Q6P8G8 290 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Moxd2Q7TT41 619 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Tmtc4Q8BG19 741 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Pak4Q8BTW9 593 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Tmem154Q8C4Q9 181 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Tspan14Q8QZY6 270 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Gga1Q8R0H9 635 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Msi2Q920Q6 346 aaKnown RBP11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Nipsnap3bQ9CQE1 247 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Psmd12Q9D8W5 456 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Rab27aQ9ERI2 221 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 FignQ9ERZ6 759 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Msh5Q9QUM7 833 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Ppp1r36D3Z0R2 411 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Rhbdl3P58873 404 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Adcy6Q01341 1165 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Ptchd3Q0EEE2 906 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Phf12Q5SPL2 1003 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Ino80dQ66JY2 873 aaKnown RBP11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Snx19Q6P4T1 997 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Gga2Q6P5E6 603 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 E2f7Q6S7F2 904 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Fam181bQ80VF6 417 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Q8CD60 292 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Irak3Q8K4B2 609 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Gspt1Q8R050 636 aaKnown RBP11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Acsf2Q8VCW8 615 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Slco1a5Q91YY5 670 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Cep72Q9D3R3 646 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Rgs3Q9DC04 966 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Cnga3Q9JJZ8 631 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Cyp39a1Q9JKJ9 470 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Ubr3Q5U430 1889 aa11.06□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Myh6Q02566 1938 aaKnown RBP11.05□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Ttc30a2A2AKQ8 664 aa11.05□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Usp17ldG5E8G2 545 aa11.05□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Usp17lcG5E8I7 545 aa11.05□□□□□ -0.64
Rnf40-201ENSMUST00000033088 WapP01173 134 aa11.05□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Abcb1bP06795 1276 aa11.05□□□□□ -0.64
Rnf40-201ENSMUST00000033088 TxnP10639 105 aaKnown RBP11.05□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Arl4aP61213 200 aa11.05□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Wdr36Q3TAQ9 899 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms