RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W UBR1P19812 1950 aa2.32□□□□□ -2.04
SSU72YNL222W IML1P47170 1584 aa2.32□□□□□ -2.04
SSU72YNL222W UMP1P38293 148 aa2.31□□□□□ -2.04
SSU72YNL222W SPG1P50088 95 aa2.31□□□□□ -2.04
SSU72YNL222W BOL2P53082 120 aa2.31□□□□□ -2.04
SSU72YNL222W RPL22BP56628 122 aaKnown RBP2.31□□□□□ -2.04
SSU72YNL222W YMR295CQ03559 197 aa2.31□□□□□ -2.04
SSU72YNL222W LPP1Q04396 274 aa2.31□□□□□ -2.04
SSU72YNL222W YOR268CQ08734 132 aa2.31□□□□□ -2.04
SSU72YNL222W YDR381C-AQ3E6R5 114 aa2.31□□□□□ -2.04
SSU72YNL222W COX19Q3E731 98 aa2.31□□□□□ -2.04
SSU72YNL222W MYO1P08964 1928 aa2.3□□□□□ -2.04
SSU72YNL222W YMR316C-AI2HB70 103 aa2.3□□□□□ -2.04
SSU72YNL222W MDM35O60200 86 aa2.3□□□□□ -2.04
SSU72YNL222W YHR213WP0CI67 198 aa2.3□□□□□ -2.04
SSU72YNL222W YKR045CP36138 183 aa2.3□□□□□ -2.04
SSU72YNL222W MZM1Q03429 123 aaPredicted RBP2.3□□□□□ -2.04
SSU72YNL222W ICY1Q04329 127 aa2.3□□□□□ -2.04
SSU72YNL222W YOL014WQ08110 124 aa2.3□□□□□ -2.04
SSU72YNL222W YOR105WQ08504 108 aa2.3□□□□□ -2.04
SSU72YNL222W YPL038W-AQ3E7B4 63 aa2.3□□□□□ -2.04
SSU72YNL222W ECM29P38737 1868 aa2.3□□□□□ -2.04
SSU72YNL222W DNF3Q12674 1656 aa2.29□□□□□ -2.04
SSU72YNL222W PAU2P32612 120 aa2.29□□□□□ -2.04
SSU72YNL222W FZF1P32805 299 aa2.29□□□□□ -2.04
SSU72YNL222W TIM12P32830 109 aa2.29□□□□□ -2.04
SSU72YNL222W VTC1P40046 129 aaRIP-Chip data2.29□□□□□ -2.04not detected
SSU72YNL222W HUR1P45820 110 aa2.29□□□□□ -2.04
SSU72YNL222W ICS3P47034 131 aa2.29□□□□□ -2.04
SSU72YNL222W SPG3Q04398 127 aaPredicted RBP2.29□□□□□ -2.04
SSU72YNL222W LSM6Q06406 86 aaKnown RBP2.29□□□□□ -2.04
SSU72YNL222W FYV12Q08559 129 aa2.29□□□□□ -2.04
SSU72YNL222W YPL247CQ12523 523 aa2.29□□□□□ -2.04
SSU72YNL222W RIM15P43565 1770 aa2.28□□□□□ -2.04
SSU72YNL222W VMR1P38735 1592 aa2.28□□□□□ -2.04
SSU72YNL222W MRPL31P14063 131 aaPredicted RBP2.28□□□□□ -2.04
SSU72YNL222W ATP15P21306 62 aa2.28□□□□□ -2.04
SSU72YNL222W FYV5P25585 152 aa2.28□□□□□ -2.04
SSU72YNL222W YAR068WP39564 161 aa2.28□□□□□ -2.04
SSU72YNL222W YEL028WP39989 153 aa2.28□□□□□ -2.04
SSU72YNL222W RSM18P40033 138 aa2.28□□□□□ -2.04
SSU72YNL222W VPS55P47111 140 aa2.28□□□□□ -2.04
SSU72YNL222W PAU12P53343 120 aa2.28□□□□□ -2.04
SSU72YNL222W YDR274CP87283 123 aa2.28□□□□□ -2.04
SSU72YNL222W COX12Q01519 83 aa2.28□□□□□ -2.04
SSU72YNL222W RDS3Q06835 107 aaPredicted RBP2.28□□□□□ -2.04
SSU72YNL222W YOR015WQ12169 119 aa2.28□□□□□ -2.04
SSU72YNL222W SMT3Q12306 101 aaKnown RBP2.28□□□□□ -2.04
SSU72YNL222W YBL008W-AQ3E821 79 aa2.28□□□□□ -2.04
SSU72YNL222W FKS3Q04952 1785 aa2.28□□□□□ -2.04
SSU72YNL222W BEM2P39960 2167 aaKnown RBP2.27□□□□□ -2.05
SSU72YNL222W YER187WP40102 141 aa2.27□□□□□ -2.05
SSU72YNL222W LST8P41318 303 aa2.27□□□□□ -2.05
SSU72YNL222W CIS3P47001 227 aa2.27□□□□□ -2.05
SSU72YNL222W PIR1Q03178 341 aa2.27□□□□□ -2.05
SSU72YNL222W BUD3P25558 1636 aa2.27□□□□□ -2.05
SSU72YNL222W APC1P53886 1748 aa2.26□□□□□ -2.05
SSU72YNL222W RPL26AP05743 127 aaKnown RBP2.26□□□□□ -2.05
SSU72YNL222W FPR2P32472 135 aa2.26□□□□□ -2.05
SSU72YNL222W QCR10P37299 77 aa2.26□□□□□ -2.05
SSU72YNL222W PAU24P38155 120 aa2.26□□□□□ -2.05
SSU72YNL222W ATP20Q12233 115 aa2.26□□□□□ -2.05
SSU72YNL222W YKL023C-AQ2V2P3 75 aa2.26□□□□□ -2.05
SSU72YNL222W MOT1P32333 1867 aa2.25□□□□□ -2.05
SSU72YNL222W YAR023CD6VPM8 179 aa2.25□□□□□ -2.05
SSU72YNL222W YLR156WP0CE96 114 aa2.25□□□□□ -2.05
SSU72YNL222W YLR159WP0CE97 114 aa2.25□□□□□ -2.05
SSU72YNL222W YLR161WP0CE98 114 aa2.25□□□□□ -2.05
SSU72YNL222W YHR214C-DP0CX93 97 aa2.25□□□□□ -2.05
SSU72YNL222W IMP2P46972 177 aa2.25□□□□□ -2.05
SSU72YNL222W YHP1Q04116 353 aa2.25□□□□□ -2.05
SSU72YNL222W EMI1Q04406 187 aa2.25□□□□□ -2.05
SSU72YNL222W YPR011CQ12251 326 aa2.25□□□□□ -2.05
SSU72YNL222W YLR146W-AQ2V2P1 62 aa2.25□□□□□ -2.05
SSU72YNL222W YOR381W-AQ3E804 55 aa2.25□□□□□ -2.05
SSU72YNL222W YOR020W-AQ3E824 90 aa2.25□□□□□ -2.05
SSU72YNL222W MHF2Q3E829 80 aa2.25□□□□□ -2.05
SSU72YNL222W TVP23P38962 199 aa2.24□□□□□ -2.05
SSU72YNL222W YPL261CQ08976 102 aa2.24□□□□□ -2.05
SSU72YNL222W VPS68Q12016 184 aa2.24□□□□□ -2.05
SSU72YNL222W MSA2P36157 363 aa2.23□□□□□ -2.05
SSU72YNL222W YHL005CP38752 130 aa2.23□□□□□ -2.05
SSU72YNL222W DSE2P38844 325 aa2.23□□□□□ -2.05
SSU72YNL222W YEL073CP39974 107 aa2.23□□□□□ -2.05
SSU72YNL222W YJR146WP47174 117 aa2.23□□□□□ -2.05
SSU72YNL222W MPC3P53311 146 aa2.23□□□□□ -2.05
SSU72YNL222W LIP1Q03579 150 aa2.23□□□□□ -2.05
SSU72YNL222W SOM1Q05676 74 aa2.23□□□□□ -2.05
SSU72YNL222W IRC23Q08416 157 aa2.23□□□□□ -2.05
SSU72YNL222W SLH1P53327 1967 aaKnown RBP2.22□□□□□ -2.05
SSU72YNL222W PFY1P07274 126 aa2.22□□□□□ -2.05
SSU72YNL222W ERG2P32352 222 aa2.22□□□□□ -2.05
SSU72YNL222W RRT1P38192 103 aa2.22□□□□□ -2.05
SSU72YNL222W YBR209WP38311 105 aa2.22□□□□□ -2.05
SSU72YNL222W YSY6P38374 65 aa2.22□□□□□ -2.05
SSU72YNL222W YHR173CP38864 112 aa2.22□□□□□ -2.05
SSU72YNL222W BRP1P53194 125 aa2.22□□□□□ -2.05
SSU72YNL222W YIL014C-AQ02598 104 aa2.22□□□□□ -2.05
SSU72YNL222W IRC19Q07843 230 aa2.22□□□□□ -2.05
SSU72YNL222W YOR343CQ12484 108 aa2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms