RNA–Protein interactions for RNA: YNL022C

RCM1, Transcript of rRNA m5C methyltransferase, yeastyeast

Gene RCM1, Length 1,473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCM1YNL022C ATP5P09457 212 aa3.23□□□□□ -1.89
RCM1YNL022C RPS22AP0C0W1 130 aaKnown RBP3.23□□□□□ -1.89
RCM1YNL022C COX10P21592 462 aa3.23□□□□□ -1.89
RCM1YNL022C MSA2P36157 363 aa3.23□□□□□ -1.89
RCM1YNL022C YBL071CP38185 102 aa3.23□□□□□ -1.89
RCM1YNL022C RPF1P38805 295 aaKnown RBP3.23□□□□□ -1.89
RCM1YNL022C HUA1P40325 198 aa3.23□□□□□ -1.89
RCM1YNL022C TDA4P47153 279 aa3.23□□□□□ -1.89
RCM1YNL022C DAD3P69850 94 aa3.23□□□□□ -1.89
RCM1YNL022C NAT3Q06504 195 aa3.23□□□□□ -1.89
RCM1YNL022C YOL014WQ08110 124 aa3.23□□□□□ -1.89
RCM1YNL022C IRC23Q08416 157 aa3.23□□□□□ -1.89
RCM1YNL022C YML100W-AQ8TGT0 57 aa3.23□□□□□ -1.89
RCM1YNL022C LSM2P38203 95 aaKnown RBP3.22□□□□□ -1.89
RCM1YNL022C YBR090CP38253 122 aa3.22□□□□□ -1.89
RCM1YNL022C IRC22P40006 225 aa3.22□□□□□ -1.89
RCM1YNL022C YGL230CP53074 147 aa3.22□□□□□ -1.89
RCM1YNL022C SMT3Q12306 101 aaKnown RBP3.22□□□□□ -1.89
RCM1YNL022C YOR020W-AQ3E824 90 aa3.22□□□□□ -1.89
RCM1YNL022C MRPL38P35996 138 aaPredicted RBP3.22□□□□□ -1.89
RCM1YNL022C SFT2P38166 215 aa3.22□□□□□ -1.89
RCM1YNL022C HSP10P38910 106 aa3.22□□□□□ -1.89
RCM1YNL022C CYB5P40312 120 aa3.22□□□□□ -1.89
RCM1YNL022C PAU5P43575 122 aa3.22□□□□□ -1.89
RCM1YNL022C HAL1Q01766 294 aa3.22□□□□□ -1.89
RCM1YNL022C FIT2Q08906 153 aa3.22□□□□□ -1.89
RCM1YNL022C YHR213WP0CI67 198 aa3.21□□□□□ -1.9
RCM1YNL022C BET1P22804 142 aa3.21□□□□□ -1.9
RCM1YNL022C HSP12P22943 109 aaKnown RBP3.21□□□□□ -1.9
RCM1YNL022C YGL010WP25338 174 aa3.21□□□□□ -1.9
RCM1YNL022C RRT1P38192 103 aa3.21□□□□□ -1.9
RCM1YNL022C SNU13P39990 126 aaKnown RBP3.21□□□□□ -1.9
RCM1YNL022C YER181CP40097 107 aa3.21□□□□□ -1.9
RCM1YNL022C TOM7P53507 60 aa3.21□□□□□ -1.9
RCM1YNL022C YOL085CQ99345 113 aa3.21□□□□□ -1.9
RCM1YNL022C PAU19P0CE85 124 aa3.2□□□□□ -1.9
RCM1YNL022C PAU21P0CE86 164 aa3.2□□□□□ -1.9
RCM1YNL022C PAU22P0CE87 164 aa3.2□□□□□ -1.9
RCM1YNL022C PAU3P25610 124 aa3.2□□□□□ -1.9
RCM1YNL022C YHR173CP38864 112 aa3.2□□□□□ -1.9
RCM1YNL022C SKI6P46948 246 aaPredicted RBP3.2□□□□□ -1.9
RCM1YNL022C SBH1P52870 82 aa3.2□□□□□ -1.9
RCM1YNL022C PAM17P36147 197 aa3.19□□□□□ -1.9
RCM1YNL022C IMP2P46972 177 aa3.19□□□□□ -1.9
RCM1YNL022C YJL027CP47063 138 aaPredicted RBP3.19□□□□□ -1.9
RCM1YNL022C GIS2P53849 153 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9 RIP-Chip
RCM1YNL022C SMD1Q02260 146 aaPredicted RBP3.19□□□□□ -1.9
RCM1YNL022C YNR034W-AQ3E841 98 aa3.19□□□□□ -1.9
RCM1YNL022C UBC5P15732 148 aa3.18□□□□□ -1.9
RCM1YNL022C ANB1P19211 157 aa3.18□□□□□ -1.9
RCM1YNL022C FZF1P32805 299 aa3.18□□□□□ -1.9
RCM1YNL022C SSS1P35179 80 aa3.18□□□□□ -1.9
RCM1YNL022C ATP19P81451 68 aa3.18□□□□□ -1.9
RCM1YNL022C SEN15Q04675 128 aa3.18□□□□□ -1.9
RCM1YNL022C YOR105WQ08504 108 aa3.18□□□□□ -1.9
RCM1YNL022C POR1P04840 283 aaKnown RBP3.17□□□□□ -1.9
RCM1YNL022C YLR156WP0CE96 114 aa3.17□□□□□ -1.9
RCM1YNL022C YLR159WP0CE97 114 aa3.17□□□□□ -1.9
RCM1YNL022C YLR161WP0CE98 114 aa3.17□□□□□ -1.9
RCM1YNL022C GAT4P40569 121 aa3.17□□□□□ -1.9
RCM1YNL022C LSM8P47093 109 aaKnown RBP3.17□□□□□ -1.9
RCM1YNL022C CYT2Q00873 224 aa3.17□□□□□ -1.9
RCM1YNL022C YMR141CP40211 102 aa3.16□□□□□ -1.9
RCM1YNL022C YFL019CP43576 117 aa3.16□□□□□ -1.9
RCM1YNL022C CUE4Q04201 117 aaPredicted RBP3.16□□□□□ -1.9
RCM1YNL022C RPB11P38902 120 aa3.16□□□□□ -1.9
RCM1YNL022C YGR025WP53216 100 aa3.16□□□□□ -1.9
RCM1YNL022C YGR164WP53291 111 aa3.16□□□□□ -1.9
RCM1YNL022C DAD4P69851 72 aa3.16□□□□□ -1.9
RCM1YNL022C YLR042CQ07990 161 aa3.16□□□□□ -1.9
RCM1YNL022C FYV12Q08559 129 aa3.16□□□□□ -1.9
RCM1YNL022C YPR063CQ12160 140 aa3.16□□□□□ -1.9
RCM1YNL022C HMRA1P0CY11 126 aa3.15□□□□□ -1.91
RCM1YNL022C PRE1P22141 198 aaKnown RBP3.15□□□□□ -1.91
RCM1YNL022C POR2P40478 281 aa3.15□□□□□ -1.91
RCM1YNL022C YFR045WP43617 309 aa3.15□□□□□ -1.91
RCM1YNL022C YIL134C-AQ45U18 67 aa3.15□□□□□ -1.91
RCM1YNL022C NUM1Q00402 2748 aa3.14□□□□□ -1.91
RCM1YNL022C MRPL31P14063 131 aaPredicted RBP3.14□□□□□ -1.91
RCM1YNL022C YRA2P36036 203 aaKnown RBP RIP-Chip data3.14□□□□□ -1.91not detected
RCM1YNL022C YER134CP40081 178 aa3.14□□□□□ -1.91
RCM1YNL022C VPS55P47111 140 aa3.14□□□□□ -1.91
RCM1YNL022C YPR013CQ12145 317 aa3.14□□□□□ -1.91
RCM1YNL022C YOR097CQ12274 175 aaPredicted RBP3.14□□□□□ -1.91
RCM1YNL022C YCR075W-AQ3E830 75 aa3.14□□□□□ -1.91
RCM1YNL022C HAP3P13434 144 aa3.13□□□□□ -1.91
RCM1YNL022C ATP15P21306 62 aa3.13□□□□□ -1.91
RCM1YNL022C HYP2P23301 157 aaKnown RBP3.13□□□□□ -1.91
RCM1YNL022C VTC1P40046 129 aaRIP-Chip data3.13□□□□□ -1.91not detected
RCM1YNL022C ELC1Q03071 99 aa3.13□□□□□ -1.91
RCM1YNL022C HOR7Q05827 59 aa3.13□□□□□ -1.91
RCM1YNL022C DAD1Q12248 94 aa3.13□□□□□ -1.91
RCM1YNL022C RPS22BQ3E7Y3 130 aaKnown RBP3.13□□□□□ -1.91
RCM1YNL022C RAD6P06104 172 aa3.12□□□□□ -1.91
RCM1YNL022C MRPL11P36521 249 aaPredicted RBP3.12□□□□□ -1.91
RCM1YNL022C SNF11P38956 169 aa3.12□□□□□ -1.91
RCM1YNL022C YDR274CP87283 123 aa3.12□□□□□ -1.91
RCM1YNL022C TVP18Q04767 167 aa3.12□□□□□ -1.91
RCM1YNL022C YAR023CD6VPM8 179 aa3.11□□□□□ -1.91
RCM1YNL022C FYV4P38783 130 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms