RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W VMA7P39111 118 aa1.28□□□□□ -2.2
SPO20YMR017W YPL067CQ02754 198 aa1.28□□□□□ -2.2
SPO20YMR017W SCP1Q08873 200 aa1.28□□□□□ -2.2
SPO20YMR017W FIT3Q08907 204 aa1.28□□□□□ -2.2
SPO20YMR017W FCF2Q12035 217 aaPredicted RBP1.28□□□□□ -2.2
SPO20YMR017W RTR2Q12378 196 aa1.28□□□□□ -2.2
SPO20YMR017W HUT1Q12520 339 aa1.28□□□□□ -2.2
SPO20YMR017W YGL194C-AQ2V2P6 80 aa1.28□□□□□ -2.2
SPO20YMR017W PRS3P38689 320 aaKnown RBP1.27□□□□□ -2.21
SPO20YMR017W YLR146W-AQ2V2P1 62 aa1.27□□□□□ -2.21
SPO20YMR017W YLR365WQ7LIF2 110 aa1.27□□□□□ -2.21
SPO20YMR017W RPL39P04650 51 aa1.26□□□□□ -2.21
SPO20YMR017W RPS28BP0C0X0 67 aaKnown RBP1.26□□□□□ -2.21
SPO20YMR017W GCV3P39726 170 aaPredicted RBP1.26□□□□□ -2.21
SPO20YMR017W YEA6P39953 335 aa1.26□□□□□ -2.21
SPO20YMR017W YMR090WQ04304 227 aaKnown RBP1.26□□□□□ -2.21
SPO20YMR017W RRT7Q07829 113 aa1.26□□□□□ -2.21
SPO20YMR017W YOR192C-CQ3E736 78 aa1.26□□□□□ -2.21
SPO20YMR017W YPR108W-AQ3E7B3 70 aa1.26□□□□□ -2.21
SPO20YMR017W RPS28AQ3E7X9 67 aaPredicted RBP1.26□□□□□ -2.21
SPO20YMR017W HUG1Q6Q5K6 68 aa1.26□□□□□ -2.21
SPO20YMR017W BPH1P25356 2167 aa1.25□□□□□ -2.21
SPO20YMR017W IRA2P19158 3079 aa1.25□□□□□ -2.21
SPO20YMR017W CUP1-1P0CX80 61 aa1.25□□□□□ -2.21
SPO20YMR017W CUP1-2P0CX81 61 aa1.25□□□□□ -2.21
SPO20YMR017W YHR138CP38841 114 aaPredicted RBP1.25□□□□□ -2.21
SPO20YMR017W EMC5P40540 141 aa1.25□□□□□ -2.21
SPO20YMR017W SNN1P48232 102 aa1.25□□□□□ -2.21
SPO20YMR017W SED1Q01589 338 aa1.25□□□□□ -2.21
SPO20YMR017W YPD1Q07688 167 aa1.25□□□□□ -2.21
SPO20YMR017W ATP14Q12349 124 aa1.25□□□□□ -2.21
SPO20YMR017W YOS1Q3E834 85 aa1.25□□□□□ -2.21
SPO20YMR017W YHR213W-AQ8TGT4 77 aa1.25□□□□□ -2.21
SPO20YMR017W TOR1P35169 2470 aa1.25□□□□□ -2.21
SPO20YMR017W PRP8P33334 2413 aaKnown RBP1.25□□□□□ -2.21
SPO20YMR017W YBR056W-AI2HB52 66 aa1.24□□□□□ -2.21
SPO20YMR017W RPL43AP0CX25 92 aaKnown RBP1.24□□□□□ -2.21
SPO20YMR017W RPL43BP0CX26 92 aa1.24□□□□□ -2.21
SPO20YMR017W ROX3P25046 220 aa1.24□□□□□ -2.21
SPO20YMR017W SRB6P32570 121 aa1.24□□□□□ -2.21
SPO20YMR017W EMP24P32803 203 aaKnown RBP1.24□□□□□ -2.21
SPO20YMR017W DER1P38307 211 aa1.24□□□□□ -2.21
SPO20YMR017W YBR292CP38357 123 aa1.24□□□□□ -2.21
SPO20YMR017W YER181CP40097 107 aa1.24□□□□□ -2.21
SPO20YMR017W YCL001W-AP87012 153 aa1.24□□□□□ -2.21
SPO20YMR017W EST3Q03096 181 aa1.24□□□□□ -2.21
SPO20YMR017W YOL118CQ08259 102 aa1.24□□□□□ -2.21
SPO20YMR017W VMA9Q3E7B6 73 aa1.24□□□□□ -2.21
SPO20YMR017W IRA1P18963 3092 aa1.23□□□□□ -2.21
SPO20YMR017W PBI2P0CT04 75 aaKnown RBP1.23□□□□□ -2.21
SPO20YMR017W ACP1P32463 125 aa1.23□□□□□ -2.21
SPO20YMR017W DYN2Q02647 92 aa1.23□□□□□ -2.21
SPO20YMR017W YMR082CQ04276 118 aa1.23□□□□□ -2.21
SPO20YMR017W FRQ1Q06389 190 aa1.23□□□□□ -2.21
SPO20YMR017W ZEO1Q08245 113 aa1.23□□□□□ -2.21
SPO20YMR017W YCL048W-AQ2V2Q2 79 aa1.23□□□□□ -2.21
SPO20YMR017W COX19Q3E731 98 aa1.23□□□□□ -2.21
SPO20YMR017W YGL258W-AQ3E740 77 aa1.23□□□□□ -2.21
SPO20YMR017W COA2Q3E823 68 aa1.23□□□□□ -2.21
SPO20YMR017W PCC1Q3E833 88 aa1.23□□□□□ -2.21
SPO20YMR017W YMR105W-AQ8TGS8 64 aa1.23□□□□□ -2.21
SPO20YMR017W PAU1P0CE88 120 aa1.22□□□□□ -2.21
SPO20YMR017W PAU14P0CE89 120 aa1.22□□□□□ -2.21
SPO20YMR017W PAU6P0CE90 120 aa1.22□□□□□ -2.21
SPO20YMR017W PAU18P0CE91 120 aa1.22□□□□□ -2.21
SPO20YMR017W PAU8P0CE92 120 aa1.22□□□□□ -2.21
SPO20YMR017W PAU11P0CE93 120 aa1.22□□□□□ -2.21
SPO20YMR017W QCR9P22289 66 aa1.22□□□□□ -2.21
SPO20YMR017W HYP2P23301 157 aaKnown RBP1.22□□□□□ -2.21
SPO20YMR017W SRP21P32342 167 aa1.22□□□□□ -2.21
SPO20YMR017W RPL14AP36105 138 aaKnown RBP1.22□□□□□ -2.21
SPO20YMR017W PAU13P38725 120 aa1.22□□□□□ -2.21
SPO20YMR017W RPL14BP38754 138 aaKnown RBP1.22□□□□□ -2.21
SPO20YMR017W YIR020CP40575 100 aa1.22□□□□□ -2.21
SPO20YMR017W MOG1P47123 218 aa1.22□□□□□ -2.21
SPO20YMR017W MIC27P50945 234 aa1.22□□□□□ -2.21
SPO20YMR017W PAU4P53427 120 aa1.22□□□□□ -2.21
SPO20YMR017W PAU10Q03050 120 aa1.22□□□□□ -2.21
SPO20YMR017W PAU20Q08322 120 aa1.22□□□□□ -2.21
SPO20YMR017W POC4Q12245 148 aaPredicted RBP1.22□□□□□ -2.21
SPO20YMR017W PAU9Q3E770 120 aa1.22□□□□□ -2.21
SPO20YMR017W SEC59P20048 519 aa1.21□□□□□ -2.22
SPO20YMR017W HSP12P22943 109 aaKnown RBP1.21□□□□□ -2.22
SPO20YMR017W SUA7P29055 345 aaPredicted RBP1.21□□□□□ -2.22
SPO20YMR017W MRPL38P35996 138 aaPredicted RBP1.21□□□□□ -2.22
SPO20YMR017W ATG8P38182 117 aaRIP-Chip data1.21□□□□□ -2.22not detected
SPO20YMR017W YBL071CP38185 102 aa1.21□□□□□ -2.22
SPO20YMR017W LST8P41318 303 aa1.21□□□□□ -2.22
SPO20YMR017W VMA21P41806 77 aa1.21□□□□□ -2.22
SPO20YMR017W SDH7Q04401 133 aa1.21□□□□□ -2.22
SPO20YMR017W Q0297Q9ZZV8 51 aa1.21□□□□□ -2.22
SPO20YMR017W NUM1Q00402 2748 aa1.2□□□□□ -2.22
SPO20YMR017W RPS22AP0C0W1 130 aaKnown RBP1.2□□□□□ -2.22
SPO20YMR017W FPR2P32472 135 aa1.2□□□□□ -2.22
SPO20YMR017W MRPL24P36525 258 aaPredicted RBP1.2□□□□□ -2.22
SPO20YMR017W SFT2P38166 215 aa1.2□□□□□ -2.22
SPO20YMR017W TRS20P38334 175 aa1.2□□□□□ -2.22
SPO20YMR017W YHR173CP38864 112 aa1.2□□□□□ -2.22
SPO20YMR017W GTT1P40582 234 aa1.2□□□□□ -2.22
SPO20YMR017W PAU15P40585 124 aa1.2□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms