RNA–Protein interactions for RNA: YJL172W

CPS1, Transcript of Vacuolar carboxypeptidase S, yeastyeast

Gene CPS1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPS1YJL172W RPL43BP0CX26 92 aa3.9□□□□□ -1.79
CPS1YJL172W RPL32P38061 130 aaKnown RBP3.9□□□□□ -1.79
CPS1YJL172W YHL042WP38729 150 aa3.9□□□□□ -1.79
CPS1YJL172W SNF11P38956 169 aa3.9□□□□□ -1.79
CPS1YJL172W PEX17P40155 199 aa3.9□□□□□ -1.79
CPS1YJL172W YGR269WP40326 108 aa3.9□□□□□ -1.79
CPS1YJL172W TDA4P47153 279 aa3.9□□□□□ -1.79
CPS1YJL172W YOL160WQ08321 113 aa3.9□□□□□ -1.79
CPS1YJL172W TSC3Q3E790 80 aa3.9□□□□□ -1.79
CPS1YJL172W YOR376W-AQ3E805 51 aa3.9□□□□□ -1.79
CPS1YJL172W RRT15Q3E811 62 aa3.9□□□□□ -1.79
CPS1YJL172W BET1P22804 142 aa3.89□□□□□ -1.79
CPS1YJL172W YBL059WP34224 193 aa3.89□□□□□ -1.79
CPS1YJL172W YNL200CP40165 246 aaKnown RBP3.89□□□□□ -1.79
CPS1YJL172W COX12Q01519 83 aa3.89□□□□□ -1.79
CPS1YJL172W MIX17Q03667 156 aa3.89□□□□□ -1.79
CPS1YJL172W NCE102Q12207 173 aaRIP-Chip data3.89□□□□□ -1.79not detected
CPS1YJL172W YER175W-AQ8TGU4 54 aa3.89□□□□□ -1.79
CPS1YJL172W RPS23AP0CX29 145 aaKnown RBP3.88□□□□□ -1.79
CPS1YJL172W RPS23BP0CX30 145 aa3.88□□□□□ -1.79
CPS1YJL172W SPT4P32914 102 aaPredicted RBP3.88□□□□□ -1.79
CPS1YJL172W YPT10P38146 199 aa3.88□□□□□ -1.79
CPS1YJL172W RRT13P40042 185 aa3.88□□□□□ -1.79
CPS1YJL172W PIR5P46999 287 aa3.88□□□□□ -1.79
CPS1YJL172W AYT1Q12226 474 aa3.88□□□□□ -1.79
CPS1YJL172W EMC6Q12431 108 aa3.88□□□□□ -1.79
CPS1YJL172W YPL038W-AQ3E7B4 63 aa3.88□□□□□ -1.79
CPS1YJL172W APS1P35181 156 aa3.87□□□□□ -1.79
CPS1YJL172W YKL044WP36092 106 aa3.87□□□□□ -1.79
CPS1YJL172W YIL163CP40448 117 aa3.87□□□□□ -1.79
CPS1YJL172W YIA6P40556 373 aa3.87□□□□□ -1.79
CPS1YJL172W YFL051CP43552 160 aa3.87□□□□□ -1.79
CPS1YJL172W YMR007WQ03675 126 aa3.87□□□□□ -1.79
CPS1YJL172W Q0255P03881 472 aa3.87□□□□□ -1.79
CPS1YJL172W RPL16AP26784 199 aaKnown RBP3.87□□□□□ -1.79
CPS1YJL172W SWD3P38123 315 aa3.87□□□□□ -1.79
CPS1YJL172W YGL034CP53186 121 aa3.87□□□□□ -1.79
CPS1YJL172W RSM19P53733 91 aaPredicted RBP3.87□□□□□ -1.79
CPS1YJL172W API2Q04413 109 aa3.87□□□□□ -1.79
CPS1YJL172W YMR254CQ04838 102 aa3.87□□□□□ -1.79
CPS1YJL172W YOL029CQ08187 201 aa3.87□□□□□ -1.79
CPS1YJL172W YLR365WQ7LIF2 110 aa3.87□□□□□ -1.79
CPS1YJL172W HTL1Q9URQ5 78 aa3.87□□□□□ -1.79
CPS1YJL172W SPS100P13130 326 aa3.86□□□□□ -1.79
CPS1YJL172W HAL1Q01766 294 aa3.86□□□□□ -1.79
CPS1YJL172W YOR186WQ08560 144 aa3.86□□□□□ -1.79
CPS1YJL172W YLR112WQ12130 139 aa3.86□□□□□ -1.79
CPS1YJL172W YPS5P53057 165 aa3.85□□□□□ -1.79
CPS1YJL172W USV1Q12132 391 aa3.85□□□□□ -1.79
CPS1YJL172W YDR381C-AQ3E6R5 114 aa3.85□□□□□ -1.79
CPS1YJL172W YPR108W-AQ3E7B3 70 aa3.85□□□□□ -1.79
CPS1YJL172W YHR139C-AO13536 103 aa3.84□□□□□ -1.79
CPS1YJL172W FZF1P32805 299 aa3.84□□□□□ -1.79
CPS1YJL172W HUG1Q6Q5K6 68 aa3.84□□□□□ -1.79
CPS1YJL172W CDC39P25655 2108 aaKnown RBP3.84□□□□□ -1.79
CPS1YJL172W TRA1P38811 3744 aa3.84□□□□□ -1.8
CPS1YJL172W RPL23AP0CX41 137 aaKnown RBP3.84□□□□□ -1.8
CPS1YJL172W RPL23BP0CX42 137 aaKnown RBP3.84□□□□□ -1.8
CPS1YJL172W HSP12P22943 109 aaKnown RBP3.84□□□□□ -1.8
CPS1YJL172W YFL019CP43576 117 aa3.84□□□□□ -1.8
CPS1YJL172W SKI6P46948 246 aaPredicted RBP3.84□□□□□ -1.8
CPS1YJL172W VPS55P47111 140 aa3.84□□□□□ -1.8
CPS1YJL172W YGL193CP53097 103 aa3.84□□□□□ -1.8
CPS1YJL172W YGL088WP53151 121 aa3.84□□□□□ -1.8
CPS1YJL172W ATP19P81451 68 aa3.84□□□□□ -1.8
CPS1YJL172W SPG4Q04438 115 aa3.84□□□□□ -1.8
CPS1YJL172W YNL217WP40152 326 aa3.83□□□□□ -1.8
CPS1YJL172W YFR035CP43608 114 aa3.83□□□□□ -1.8
CPS1YJL172W YGR050CP53231 118 aa3.83□□□□□ -1.8
CPS1YJL172W SED1Q01589 338 aa3.83□□□□□ -1.8
CPS1YJL172W YIL014C-AQ02598 104 aa3.83□□□□□ -1.8
CPS1YJL172W LSM6Q06406 86 aaKnown RBP3.83□□□□□ -1.8
CPS1YJL172W RPL16BP26785 198 aaKnown RBP3.82□□□□□ -1.8
CPS1YJL172W IMP1P28627 190 aa3.82□□□□□ -1.8
CPS1YJL172W YHR213WP0CI67 198 aa3.81□□□□□ -1.8
CPS1YJL172W MRPL31P14063 131 aaPredicted RBP3.81□□□□□ -1.8
CPS1YJL172W YPI1P43587 155 aa3.81□□□□□ -1.8
CPS1YJL172W RPL39P04650 51 aa3.81□□□□□ -1.8
CPS1YJL172W YMR316C-AI2HB70 103 aa3.8□□□□□ -1.8
CPS1YJL172W KEG1P43614 200 aa3.8□□□□□ -1.8
CPS1YJL172W YOR268CQ08734 132 aa3.8□□□□□ -1.8
CPS1YJL172W TDA8Q6B2U8 126 aa3.8□□□□□ -1.8
CPS1YJL172W RPL15AP05748 204 aaKnown RBP3.79□□□□□ -1.8
CPS1YJL172W RPB9P27999 122 aa3.79□□□□□ -1.8
CPS1YJL172W YHR173CP38864 112 aa3.79□□□□□ -1.8
CPS1YJL172W TDA2P40045 126 aa3.79□□□□□ -1.8
CPS1YJL172W YER187WP40102 141 aa3.79□□□□□ -1.8
CPS1YJL172W URM1P40554 99 aaPredicted RBP3.79□□□□□ -1.8
CPS1YJL172W RPL15BP54780 204 aaPredicted RBP3.79□□□□□ -1.8
CPS1YJL172W ICY1Q04329 127 aa3.79□□□□□ -1.8
CPS1YJL172W TMC1Q08422 150 aaPredicted RBP3.79□□□□□ -1.8
CPS1YJL172W YML100W-AQ8TGT0 57 aa3.79□□□□□ -1.8
CPS1YJL172W YCL042WP25572 119 aa3.78□□□□□ -1.8
CPS1YJL172W FPR2P32472 135 aa3.78□□□□□ -1.8
CPS1YJL172W YKR045CP36138 183 aa3.78□□□□□ -1.8
CPS1YJL172W PAU7P39545 55 aa3.78□□□□□ -1.8
CPS1YJL172W YAL064WP39711 94 aa3.78□□□□□ -1.8
CPS1YJL172W YMR295CQ03559 197 aa3.78□□□□□ -1.8
CPS1YJL172W YCL048W-AQ2V2Q2 79 aa3.78□□□□□ -1.8
CPS1YJL172W CTR2P38865 189 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms