RNA–Protein interactions for RNA: YHR170W

NMD3, Transcript of Protein involved in nuclear export of the large ribosomal subunit, yeastyeast

Gene NMD3, Length 1,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD3YHR170W YPL162CQ12042 273 aa3.37□□□□□ -1.87
NMD3YHR170W YPR063CQ12160 140 aa3.37□□□□□ -1.87
NMD3YHR170W YPR014CQ6B0W2 109 aa3.37□□□□□ -1.87
NMD3YHR170W TEM1P38987 245 aa3.36□□□□□ -1.87
NMD3YHR170W YIL014C-AQ02598 104 aa3.36□□□□□ -1.87
NMD3YHR170W YLR050CQ12155 161 aaKnown RBP3.36□□□□□ -1.87
NMD3YHR170W YBR200W-AQ3E755 54 aa3.36□□□□□ -1.87
NMD3YHR170W PRE1P22141 198 aaKnown RBP3.35□□□□□ -1.87
NMD3YHR170W YDR274CP87283 123 aa3.35□□□□□ -1.87
NMD3YHR170W VPS71Q03433 280 aa3.35□□□□□ -1.87
NMD3YHR170W CPR1P14832 162 aaKnown RBP3.34□□□□□ -1.87
NMD3YHR170W YGL118CP53132 145 aa3.34□□□□□ -1.87
NMD3YHR170W PKR1Q03880 122 aaKnown RBP3.34□□□□□ -1.87
NMD3YHR170W TRP1P00912 224 aa3.34□□□□□ -1.88
NMD3YHR170W NRG2P38082 220 aa3.34□□□□□ -1.88
NMD3YHR170W RRT13P40042 185 aa3.34□□□□□ -1.88
NMD3YHR170W YFL067WP43537 175 aa3.34□□□□□ -1.88
NMD3YHR170W LSM8P47093 109 aaKnown RBP3.34□□□□□ -1.88
NMD3YHR170W POP3P53833 195 aaPredicted RBP3.34□□□□□ -1.88
NMD3YHR170W AIM34Q03673 198 aa3.34□□□□□ -1.88
NMD3YHR170W TVP18Q04767 167 aa3.34□□□□□ -1.88
NMD3YHR170W COA6Q3E846 104 aa3.34□□□□□ -1.88
NMD3YHR170W SCS22Q6Q595 175 aa3.34□□□□□ -1.88
NMD3YHR170W HHF1P02309 103 aaKnown RBP3.33□□□□□ -1.88
NMD3YHR170W RPS11AP0CX47 156 aaKnown RBP3.33□□□□□ -1.88
NMD3YHR170W RPS11BP0CX48 156 aaKnown RBP3.33□□□□□ -1.88
NMD3YHR170W FUN14P18411 198 aa3.33□□□□□ -1.88
NMD3YHR170W ERV14P53173 138 aa3.33□□□□□ -1.88
NMD3YHR170W YLR042CQ07990 161 aa3.33□□□□□ -1.88
NMD3YHR170W RPL2AP0CX45 254 aaKnown RBP3.32□□□□□ -1.88
NMD3YHR170W RPL2BP0CX46 254 aaKnown RBP3.32□□□□□ -1.88
NMD3YHR170W PAU16P35994 123 aa3.32□□□□□ -1.88
NMD3YHR170W RPR2P40571 144 aa3.32□□□□□ -1.88
NMD3YHR170W CIN5P40917 295 aa3.32□□□□□ -1.88
NMD3YHR170W YJR085CP47131 105 aaKnown RBP3.32□□□□□ -1.88
NMD3YHR170W YDR366CP87287 132 aa3.32□□□□□ -1.88
NMD3YHR170W YMR230W-AQ3E7B5 62 aa3.32□□□□□ -1.88
NMD3YHR170W YCR001WP25347 104 aa3.31□□□□□ -1.88
NMD3YHR170W YCR023CP25351 611 aa3.31□□□□□ -1.88
NMD3YHR170W SCM4P32564 187 aa3.31□□□□□ -1.88
NMD3YHR170W FYV4P38783 130 aaPredicted RBP3.31□□□□□ -1.88
NMD3YHR170W COX12Q01519 83 aa3.31□□□□□ -1.88
NMD3YHR170W MGR2Q02889 113 aa3.31□□□□□ -1.88
NMD3YHR170W YPL229WQ99395 206 aa3.31□□□□□ -1.88
NMD3YHR170W PFY1P07274 126 aa3.3□□□□□ -1.88
NMD3YHR170W DCV1P43595 202 aa3.3□□□□□ -1.88
NMD3YHR170W NAT5Q08689 176 aa3.3□□□□□ -1.88
NMD3YHR170W SEC11P15367 167 aa3.29□□□□□ -1.88
NMD3YHR170W APS1P35181 156 aa3.29□□□□□ -1.88
NMD3YHR170W OXA1P39952 402 aa3.29□□□□□ -1.88
NMD3YHR170W YNL217WP40152 326 aa3.29□□□□□ -1.88
NMD3YHR170W PEX17P40155 199 aa3.29□□□□□ -1.88
NMD3YHR170W YDR042CQ03205 200 aa3.29□□□□□ -1.88
NMD3YHR170W FCF1Q05498 189 aaPredicted RBP3.29□□□□□ -1.88
NMD3YHR170W YDL085C-AQ3E7B7 68 aaKnown RBP3.29□□□□□ -1.88
NMD3YHR170W HMRA2P0CY13 119 aa3.29□□□□□ -1.88
NMD3YHR170W MRPL44P19956 98 aa3.29□□□□□ -1.88
NMD3YHR170W YGL088WP53151 121 aa3.29□□□□□ -1.88
NMD3YHR170W DGA1Q08650 418 aa3.29□□□□□ -1.88
NMD3YHR170W YBL008W-AQ3E821 79 aa3.29□□□□□ -1.88
NMD3YHR170W YKR070WP36151 352 aaKnown RBP3.28□□□□□ -1.88
NMD3YHR170W YBR209WP38311 105 aa3.28□□□□□ -1.88
NMD3YHR170W KRE9P39005 276 aa3.28□□□□□ -1.88
NMD3YHR170W YGL230CP53074 147 aa3.28□□□□□ -1.88
NMD3YHR170W YGL034CP53186 121 aa3.28□□□□□ -1.88
NMD3YHR170W YNL184CP53876 108 aa3.28□□□□□ -1.88
NMD3YHR170W YMR103CQ04436 120 aa3.28□□□□□ -1.88
NMD3YHR170W CNL1Q06333 122 aa3.28□□□□□ -1.88
NMD3YHR170W RDS3Q06835 107 aaPredicted RBP3.28□□□□□ -1.88
NMD3YHR170W YDL157CQ12082 118 aa3.28□□□□□ -1.88
NMD3YHR170W HTL1Q9URQ5 78 aa3.28□□□□□ -1.88
NMD3YHR170W MSL1P40567 111 aaPredicted RBP3.27□□□□□ -1.89
NMD3YHR170W TOS6P48560 102 aa3.27□□□□□ -1.89
NMD3YHR170W YLR361C-AQ3E795 98 aa3.27□□□□□ -1.89
NMD3YHR170W COA3Q3E7B2 85 aa3.27□□□□□ -1.89
NMD3YHR170W YHR139C-AO13536 103 aa3.26□□□□□ -1.89
NMD3YHR170W RPS8AP0CX39 200 aaKnown RBP3.26□□□□□ -1.89
NMD3YHR170W RPS8BP0CX40 200 aaKnown RBP3.26□□□□□ -1.89
NMD3YHR170W AUA1P32450 94 aa3.26□□□□□ -1.89
NMD3YHR170W YJR146WP47174 117 aa3.26□□□□□ -1.89
NMD3YHR170W FYV7Q12247 151 aa3.26□□□□□ -1.89
NMD3YHR170W DFM1Q12743 341 aaKnown RBP3.26□□□□□ -1.89
NMD3YHR170W YOR008C-AQ3E7B9 74 aa3.26□□□□□ -1.89
NMD3YHR170W YDL022C-AP0C5L6 82 aa3.25□□□□□ -1.89
NMD3YHR170W YRA2P36036 203 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
NMD3YHR170W SHH4Q06236 168 aa3.25□□□□□ -1.89
NMD3YHR170W ATP5P09457 212 aa3.25□□□□□ -1.89
NMD3YHR170W UBC5P15732 148 aa3.25□□□□□ -1.89
NMD3YHR170W ATP15P21306 62 aa3.25□□□□□ -1.89
NMD3YHR170W EDC2P40023 145 aaPredicted RBP3.25□□□□□ -1.89
NMD3YHR170W YIL059CP40520 121 aa3.25□□□□□ -1.89
NMD3YHR170W PMP3P87284 55 aa3.25□□□□□ -1.89
NMD3YHR170W YCR075W-AQ3E830 75 aa3.25□□□□□ -1.89
NMD3YHR170W SAE3P89114 91 aa3.24□□□□□ -1.89
NMD3YHR170W YDR115WQ04598 105 aa3.24□□□□□ -1.89
NMD3YHR170W SCW10Q04951 389 aa3.24□□□□□ -1.89
NMD3YHR170W VAM10Q08474 114 aa3.24□□□□□ -1.89
NMD3YHR170W YPL261CQ08976 102 aa3.24□□□□□ -1.89
NMD3YHR170W YEL067CP39978 195 aa3.23□□□□□ -1.89
NMD3YHR170W YEL008WP40001 126 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms