RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W TDA2P40045 126 aa0.76□□□□□ -2.29
SMC1YFL008W PEX17P40155 199 aa0.76□□□□□ -2.29
SMC1YFL008W AIM19P40502 157 aa0.76□□□□□ -2.29
SMC1YFL008W YNL184CP53876 108 aa0.76□□□□□ -2.29
SMC1YFL008W YMR295CQ03559 197 aa0.76□□□□□ -2.29
SMC1YFL008W YOR097CQ12274 175 aaPredicted RBP0.76□□□□□ -2.29
SMC1YFL008W YPL247CQ12523 523 aa0.76□□□□□ -2.29
SMC1YFL008W YKL065W-AQ2V2P2 73 aa0.76□□□□□ -2.29
SMC1YFL008W MIG1P27705 504 aa0.76□□□□□ -2.29
SMC1YFL008W SWD2P36104 329 aaPredicted RBP0.76□□□□□ -2.29
SMC1YFL008W MRPL39P36533 70 aa0.76□□□□□ -2.29
SMC1YFL008W MRPL49P40858 161 aaPredicted RBP0.76□□□□□ -2.29
SMC1YFL008W ECO1P43605 281 aa0.76□□□□□ -2.29
SMC1YFL008W SWS2P53937 143 aa0.76□□□□□ -2.29
SMC1YFL008W LPP1Q04396 274 aa0.76□□□□□ -2.29
SMC1YFL008W YMR103CQ04436 120 aa0.76□□□□□ -2.29
SMC1YFL008W NMA1Q06178 401 aaKnown RBP0.76□□□□□ -2.29
SMC1YFL008W YOS1Q3E834 85 aa0.76□□□□□ -2.29
SMC1YFL008W RPL18AP0CX49 186 aaKnown RBP0.75□□□□□ -2.29
SMC1YFL008W RPL18BP0CX50 186 aaKnown RBP0.75□□□□□ -2.29
SMC1YFL008W QRI5P32344 111 aa0.75□□□□□ -2.29
SMC1YFL008W SFT2P38166 215 aa0.75□□□□□ -2.29
SMC1YFL008W MIC12P38341 106 aa0.75□□□□□ -2.29
SMC1YFL008W YER134CP40081 178 aa0.75□□□□□ -2.29
SMC1YFL008W KNH1P50112 268 aa0.75□□□□□ -2.29
SMC1YFL008W YGL088WP53151 121 aa0.75□□□□□ -2.29
SMC1YFL008W BUD25P85052 153 aa0.75□□□□□ -2.29
SMC1YFL008W MRPS8Q03799 155 aa0.75□□□□□ -2.29
SMC1YFL008W EMI1Q04406 187 aa0.75□□□□□ -2.29
SMC1YFL008W IRC19Q07843 230 aa0.75□□□□□ -2.29
SMC1YFL008W YLR042CQ07990 161 aa0.75□□□□□ -2.29
SMC1YFL008W MSA1Q08471 629 aa0.75□□□□□ -2.29
SMC1YFL008W POC4Q12245 148 aaPredicted RBP0.75□□□□□ -2.29
SMC1YFL008W ATO3Q12359 275 aa0.75□□□□□ -2.29
SMC1YFL008W YGL258W-AQ3E740 77 aa0.75□□□□□ -2.29
SMC1YFL008W YPL038W-AQ3E7B4 63 aa0.75□□□□□ -2.29
SMC1YFL008W YLR365WQ7LIF2 110 aa0.75□□□□□ -2.29
SMC1YFL008W YMR316C-AI2HB70 103 aa0.75□□□□□ -2.29
SMC1YFL008W COX5AP00424 153 aa0.75□□□□□ -2.29
SMC1YFL008W QCR8P08525 94 aa0.75□□□□□ -2.29
SMC1YFL008W YER039C-AP0CD97 72 aa0.75□□□□□ -2.29
SMC1YFL008W YCR050CP25630 102 aa0.75□□□□□ -2.29
SMC1YFL008W YBR209WP38311 105 aa0.75□□□□□ -2.29
SMC1YFL008W YAR068WP39564 161 aa0.75□□□□□ -2.29
SMC1YFL008W YER076CP40049 302 aa0.75□□□□□ -2.29
SMC1YFL008W YNL198CP40166 100 aa0.75□□□□□ -2.29
SMC1YFL008W YNL194CP40169 301 aa0.75□□□□□ -2.29
SMC1YFL008W DCV1P43595 202 aa0.75□□□□□ -2.29
SMC1YFL008W PET191Q02772 108 aa0.75□□□□□ -2.29
SMC1YFL008W MIX14Q04341 121 aa0.75□□□□□ -2.29
SMC1YFL008W YMR252CQ04814 134 aa0.75□□□□□ -2.29
SMC1YFL008W YMR320WQ04897 101 aa0.75□□□□□ -2.29
SMC1YFL008W HUB1Q6Q546 73 aa0.75□□□□□ -2.29
SMC1YFL008W ACC1Q00955 2233 aaKnown RBP0.75□□□□□ -2.29
SMC1YFL008W RPL26AP05743 127 aaKnown RBP0.75□□□□□ -2.29
SMC1YFL008W FZF1P32805 299 aa0.75□□□□□ -2.29
SMC1YFL008W YHR140WP38842 239 aa0.75□□□□□ -2.29
SMC1YFL008W MPC2P38857 129 aa0.75□□□□□ -2.29
SMC1YFL008W SVP26P38869 228 aa0.75□□□□□ -2.29
SMC1YFL008W TVP23P38962 199 aa0.75□□□□□ -2.29
SMC1YFL008W YAR029WP39549 74 aa0.75□□□□□ -2.29
SMC1YFL008W RSM18P40033 138 aa0.75□□□□□ -2.29
SMC1YFL008W YMR141CP40211 102 aa0.75□□□□□ -2.29
SMC1YFL008W YJL118WP47022 219 aa0.75□□□□□ -2.29
SMC1YFL008W RPL26BP53221 127 aaKnown RBP0.75□□□□□ -2.29
SMC1YFL008W YLR194CQ05777 254 aa0.75□□□□□ -2.29
SMC1YFL008W CDD1Q06549 142 aa0.75□□□□□ -2.29
SMC1YFL008W YPL261CQ08976 102 aa0.75□□□□□ -2.29
SMC1YFL008W YOR020W-AQ3E824 90 aa0.75□□□□□ -2.29
SMC1YFL008W YHR139C-AO13536 103 aa0.74□□□□□ -2.29
SMC1YFL008W AHT1P29589 182 aa0.74□□□□□ -2.29
SMC1YFL008W TIM12P32830 109 aa0.74□□□□□ -2.29
SMC1YFL008W AIM4P38305 123 aaPredicted RBP0.74□□□□□ -2.29
SMC1YFL008W SFT1P43682 97 aa0.74□□□□□ -2.29
SMC1YFL008W YOR343CQ12484 108 aa0.74□□□□□ -2.29
SMC1YFL008W YOR314WQ12506 109 aa0.74□□□□□ -2.29
SMC1YFL008W YOR008C-AQ3E7B9 74 aa0.74□□□□□ -2.29
SMC1YFL008W RPL2AP0CX45 254 aaKnown RBP0.74□□□□□ -2.29
SMC1YFL008W RPL2BP0CX46 254 aaKnown RBP0.74□□□□□ -2.29
SMC1YFL008W RPL30P14120 105 aaKnown RBP0.74□□□□□ -2.29
SMC1YFL008W ERG2P32352 222 aa0.74□□□□□ -2.29
SMC1YFL008W YHL005CP38752 130 aa0.74□□□□□ -2.29
SMC1YFL008W YFL051CP43552 160 aa0.74□□□□□ -2.29
SMC1YFL008W YFR054CP43622 192 aa0.74□□□□□ -2.29
SMC1YFL008W HUR1P45820 110 aa0.74□□□□□ -2.29
SMC1YFL008W YJL028WP47062 111 aa0.74□□□□□ -2.29
SMC1YFL008W TOS6P48560 102 aa0.74□□□□□ -2.29
SMC1YFL008W YGR050CP53231 118 aa0.74□□□□□ -2.29
SMC1YFL008W PIR1Q03178 341 aa0.74□□□□□ -2.29
SMC1YFL008W YOL118CQ08259 102 aa0.74□□□□□ -2.29
SMC1YFL008W YOR029WQ12243 111 aa0.74□□□□□ -2.29
SMC1YFL008W YDR381C-AQ3E6R5 114 aa0.74□□□□□ -2.29
SMC1YFL008W YDR182W-AQ3E796 67 aa0.74□□□□□ -2.29
SMC1YFL008W YPR108W-AQ3E7B3 70 aa0.74□□□□□ -2.29
SMC1YFL008W YLR342W-AQ3E810 57 aa0.74□□□□□ -2.29
SMC1YFL008W PFY1P07274 126 aa0.74□□□□□ -2.29
SMC1YFL008W UBC4P15731 148 aa0.74□□□□□ -2.29
SMC1YFL008W RRT1P38192 103 aa0.74□□□□□ -2.29
SMC1YFL008W YHR180WP38868 163 aa0.74□□□□□ -2.29
SMC1YFL008W VPS55P47111 140 aa0.74□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms