RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W ARF1P11076 181 aaKnown RBP1.75□□□□□ -2.13
MCD1YDL003W MPC2P38857 129 aa1.75□□□□□ -2.13
MCD1YDL003W PEX22P39718 180 aa1.75□□□□□ -2.13
MCD1YDL003W YER187WP40102 141 aa1.75□□□□□ -2.13
MCD1YDL003W YMR295CQ03559 197 aa1.75□□□□□ -2.13
MCD1YDL003W YHP1Q04116 353 aa1.75□□□□□ -2.13
MCD1YDL003W VPS68Q12016 184 aa1.75□□□□□ -2.13
MCD1YDL003W YOR192C-CQ3E736 78 aa1.75□□□□□ -2.13
MCD1YDL003W YHR214C-EQ8TGK0 99 aa1.75□□□□□ -2.13
MCD1YDL003W CCH1P50077 2039 aa1.75□□□□□ -2.13
MCD1YDL003W PFY1P07274 126 aa1.74□□□□□ -2.13
MCD1YDL003W YSF3P0C074 85 aaPredicted RBP1.74□□□□□ -2.13
MCD1YDL003W AIM4P38305 123 aaPredicted RBP1.74□□□□□ -2.13
MCD1YDL003W YER079WP40052 210 aaKnown RBP1.74□□□□□ -2.13
MCD1YDL003W DCV1P43595 202 aa1.74□□□□□ -2.13
MCD1YDL003W ECO1P43605 281 aa1.74□□□□□ -2.13
MCD1YDL003W HUR1P45820 110 aa1.74□□□□□ -2.13
MCD1YDL003W GAT3Q07928 141 aa1.74□□□□□ -2.13
MCD1YDL003W TIM22Q12328 207 aa1.74□□□□□ -2.13
MCD1YDL003W YOR008C-AQ3E7B9 74 aa1.74□□□□□ -2.13
MCD1YDL003W CCW14O13547 238 aa1.74□□□□□ -2.13
MCD1YDL003W RPL28P02406 149 aaKnown RBP1.74□□□□□ -2.13
MCD1YDL003W RPS8AP0CX39 200 aaKnown RBP1.74□□□□□ -2.13
MCD1YDL003W RPS8BP0CX40 200 aaKnown RBP1.74□□□□□ -2.13
MCD1YDL003W UBC4P15731 148 aa1.74□□□□□ -2.13
MCD1YDL003W YBL071CP38185 102 aa1.74□□□□□ -2.13
MCD1YDL003W YBR209WP38311 105 aa1.74□□□□□ -2.13
MCD1YDL003W PET8P38921 284 aa1.74□□□□□ -2.13
MCD1YDL003W YGR219WP53307 113 aa1.74□□□□□ -2.13
MCD1YDL003W YNR077CP53758 84 aa1.74□□□□□ -2.13
MCD1YDL003W MIX14Q04341 121 aa1.74□□□□□ -2.13
MCD1YDL003W YOL118CQ08259 102 aa1.74□□□□□ -2.13
MCD1YDL003W NIP7Q08962 181 aaKnown RBP1.74□□□□□ -2.13
MCD1YDL003W TDA2P40045 126 aa1.73□□□□□ -2.13
MCD1YDL003W PEX17P40155 199 aa1.73□□□□□ -2.13
MCD1YDL003W YFL019CP43576 117 aa1.73□□□□□ -2.13
MCD1YDL003W YFR054CP43622 192 aa1.73□□□□□ -2.13
MCD1YDL003W TOS6P48560 102 aa1.73□□□□□ -2.13
MCD1YDL003W NRM1P53718 249 aa1.73□□□□□ -2.13
MCD1YDL003W YNL046WP53956 172 aa1.73□□□□□ -2.13
MCD1YDL003W MGR2Q02889 113 aa1.73□□□□□ -2.13
MCD1YDL003W PBP4Q07362 185 aaKnown RBP1.73□□□□□ -2.13
MCD1YDL003W IRC23Q08416 157 aa1.73□□□□□ -2.13
MCD1YDL003W YLR285C-AQ3E771 56 aa1.73□□□□□ -2.13
MCD1YDL003W YLR342W-AQ3E810 57 aa1.73□□□□□ -2.13
MCD1YDL003W RPS14AP06367 137 aaKnown RBP1.72□□□□□ -2.13
MCD1YDL003W MXR2P25566 168 aa1.72□□□□□ -2.13
MCD1YDL003W IES6P32617 166 aa1.72□□□□□ -2.13
MCD1YDL003W YBR144CP34215 104 aa1.72□□□□□ -2.13
MCD1YDL003W YKR032WP36127 104 aa1.72□□□□□ -2.13
MCD1YDL003W YHR022CP38763 256 aa1.72□□□□□ -2.13
MCD1YDL003W CTR2P38865 189 aa1.72□□□□□ -2.13
MCD1YDL003W RPS14BP39516 138 aaKnown RBP1.72□□□□□ -2.13
MCD1YDL003W YNL208WP40159 199 aaKnown RBP1.72□□□□□ -2.13
MCD1YDL003W RPC11Q04307 110 aaPredicted RBP1.72□□□□□ -2.13
MCD1YDL003W COA3Q3E7B2 85 aa1.72□□□□□ -2.13
MCD1YDL003W YBR126W-AQ8TGU7 68 aa1.72□□□□□ -2.13
MCD1YDL003W RRT1P38192 103 aa1.71□□□□□ -2.13
MCD1YDL003W YEL067CP39978 195 aa1.71□□□□□ -2.13
MCD1YDL003W RSM18P40033 138 aa1.71□□□□□ -2.13
MCD1YDL003W VTC1P40046 129 aaRIP-Chip data1.71□□□□□ -2.13not detected
MCD1YDL003W YMR141CP40211 102 aa1.71□□□□□ -2.13
MCD1YDL003W TDA7P53882 636 aaPredicted RBP1.71□□□□□ -2.13
MCD1YDL003W ICY1Q04329 127 aa1.71□□□□□ -2.13
MCD1YDL003W API2Q04413 109 aa1.71□□□□□ -2.13
MCD1YDL003W ATP20Q12233 115 aa1.71□□□□□ -2.13
MCD1YDL003W YOR381W-AQ3E804 55 aa1.71□□□□□ -2.13
MCD1YDL003W MIC10Q96VH5 97 aa1.71□□□□□ -2.13
MCD1YDL003W YHR214C-DP0CX93 97 aa1.71□□□□□ -2.14
MCD1YDL003W SPS100P13130 326 aa1.71□□□□□ -2.14
MCD1YDL003W ATP15P21306 62 aa1.71□□□□□ -2.14
MCD1YDL003W HSP150P32478 413 aa1.71□□□□□ -2.14
MCD1YDL003W SPT4P32914 102 aaPredicted RBP1.71□□□□□ -2.14
MCD1YDL003W TVP23P38962 199 aa1.71□□□□□ -2.14
MCD1YDL003W SPI1P40092 148 aa1.71□□□□□ -2.14
MCD1YDL003W KEG1P43614 200 aa1.71□□□□□ -2.14
MCD1YDL003W IRC21Q04772 201 aa1.71□□□□□ -2.14
MCD1YDL003W YMR175W-AQ3E766 64 aa1.71□□□□□ -2.14
MCD1YDL003W RPL26AP05743 127 aaKnown RBP1.7□□□□□ -2.14
MCD1YDL003W YCR022CP25620 114 aa1.7□□□□□ -2.14
MCD1YDL003W AGA1P32323 725 aa1.7□□□□□ -2.14
MCD1YDL003W REE1P40893 198 aa1.7□□□□□ -2.14
MCD1YDL003W PIR5P46999 287 aa1.7□□□□□ -2.14
MCD1YDL003W YOR314WQ12506 109 aa1.7□□□□□ -2.14
MCD1YDL003W TSC3Q3E790 80 aa1.7□□□□□ -2.14
MCD1YDL003W RPL15AP05748 204 aaKnown RBP1.69□□□□□ -2.14
MCD1YDL003W QCR8P08525 94 aa1.69□□□□□ -2.14
MCD1YDL003W YLR156WP0CE96 114 aa1.69□□□□□ -2.14
MCD1YDL003W YLR159WP0CE97 114 aa1.69□□□□□ -2.14
MCD1YDL003W YLR161WP0CE98 114 aa1.69□□□□□ -2.14
MCD1YDL003W YJR107C-AP0CT86 78 aa1.69□□□□□ -2.14
MCD1YDL003W RPL16AP26784 199 aaKnown RBP1.69□□□□□ -2.14
MCD1YDL003W MSA2P36157 363 aa1.69□□□□□ -2.14
MCD1YDL003W SHU1P38751 150 aa1.69□□□□□ -2.14
MCD1YDL003W ICS3P47034 131 aa1.69□□□□□ -2.14
MCD1YDL003W SPG1P50088 95 aa1.69□□□□□ -2.14
MCD1YDL003W YGR018CP53211 109 aa1.69□□□□□ -2.14
MCD1YDL003W RPL26BP53221 127 aaKnown RBP1.69□□□□□ -2.14
MCD1YDL003W PCP1P53259 346 aa1.69□□□□□ -2.14
MCD1YDL003W MPC3P53311 146 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 47.6 ms