RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeastyeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP6YBR055C YMR321CQ04898 105 aa1.27□□□□□ -2.21
PRP6YBR055C VAM10Q08474 114 aa1.27□□□□□ -2.21
PRP6YBR055C ANB1P19211 157 aa1.27□□□□□ -2.21
PRP6YBR055C SEC59P20048 519 aa1.27□□□□□ -2.21
PRP6YBR055C LHP1P33399 275 aaKnown RBP1.27□□□□□ -2.21
PRP6YBR055C YKL044WP36092 106 aa1.27□□□□□ -2.21
PRP6YBR055C ERV14P53173 138 aa1.27□□□□□ -2.21
PRP6YBR055C YCR099CP25657 155 aa1.26□□□□□ -2.21
PRP6YBR055C YBR242WP38331 238 aa1.26□□□□□ -2.21
PRP6YBR055C HSP10P38910 106 aa1.26□□□□□ -2.21
PRP6YBR055C RGI1P40043 161 aaPredicted RBP1.26□□□□□ -2.21
PRP6YBR055C YGL149WP53116 101 aa1.26□□□□□ -2.21
PRP6YBR055C IGO1P53897 168 aa1.26□□□□□ -2.21
PRP6YBR055C SED1Q01589 338 aa1.26□□□□□ -2.21
PRP6YBR055C FIT1Q04433 528 aa1.26□□□□□ -2.21
PRP6YBR055C YBR027CP38220 110 aa1.26□□□□□ -2.21
PRP6YBR055C RTC6O14464 93 aa1.25□□□□□ -2.21
PRP6YBR055C YHR212W-AP0CX91 67 aa1.25□□□□□ -2.21
PRP6YBR055C RTR2Q12378 196 aa1.25□□□□□ -2.21
PRP6YBR055C MHF1Q3E835 90 aa1.25□□□□□ -2.21
PRP6YBR055C YGL014C-AP0C5N1 53 aa1.24□□□□□ -2.21
PRP6YBR055C HAP3P13434 144 aa1.24□□□□□ -2.21
PRP6YBR055C MRPL15P36523 253 aa1.24□□□□□ -2.21
PRP6YBR055C SNF11P38956 169 aa1.24□□□□□ -2.21
PRP6YBR055C PAM16P42949 149 aa1.24□□□□□ -2.21
PRP6YBR055C GPI19Q04082 140 aa1.24□□□□□ -2.21
PRP6YBR055C TOR1P35169 2470 aa1.24□□□□□ -2.21
PRP6YBR055C YHR213WP0CI67 198 aa1.24□□□□□ -2.21
PRP6YBR055C MRPL11P36521 249 aaPredicted RBP1.24□□□□□ -2.21
PRP6YBR055C RPS12P48589 143 aaKnown RBP1.24□□□□□ -2.21
PRP6YBR055C YLR296WQ05898 108 aa1.24□□□□□ -2.21
PRP6YBR055C TAO3P40468 2376 aa1.24□□□□□ -2.21
PRP6YBR055C RPL33AP05744 107 aaKnown RBP1.24□□□□□ -2.21
PRP6YBR055C HAP2P06774 265 aa1.24□□□□□ -2.21
PRP6YBR055C EMP24P32803 203 aaKnown RBP1.24□□□□□ -2.21
PRP6YBR055C LST8P41318 303 aa1.24□□□□□ -2.21
PRP6YBR055C YGR164WP53291 111 aa1.23□□□□□ -2.21
PRP6YBR055C TEL1P38110 2787 aa1.23□□□□□ -2.21
PRP6YBR055C YJL197C-AP0C5P0 93 aa1.23□□□□□ -2.21
PRP6YBR055C AQY2P0CD90 149 aa1.23□□□□□ -2.21
PRP6YBR055C RPL43AP0CX25 92 aaKnown RBP1.23□□□□□ -2.21
PRP6YBR055C RPL43BP0CX26 92 aa1.23□□□□□ -2.21
PRP6YBR055C TDA2P40045 126 aa1.23□□□□□ -2.21
PRP6YBR055C YPR203WQ08994 102 aa1.23□□□□□ -2.21
PRP6YBR055C ATG8P38182 117 aaRIP-Chip data1.22□□□□□ -2.21not detected
PRP6YBR055C YHL037CP38733 133 aa1.22□□□□□ -2.21
PRP6YBR055C AIM18P38884 321 aa1.22□□□□□ -2.21
PRP6YBR055C YMR122CQ03879 124 aa1.22□□□□□ -2.21
PRP6YBR055C FYV7Q12247 151 aa1.22□□□□□ -2.21
PRP6YBR055C OCA6Q12454 224 aa1.22□□□□□ -2.21
PRP6YBR055C GNA1P43577 159 aaPredicted RBP1.21□□□□□ -2.22
PRP6YBR055C RPL36BO14455 100 aaKnown RBP1.21□□□□□ -2.22
PRP6YBR055C RPL36AP05745 100 aaPredicted RBP1.21□□□□□ -2.22
PRP6YBR055C SEN15Q04675 128 aa1.21□□□□□ -2.22
PRP6YBR055C VAR1P02381 398 aa1.2□□□□□ -2.22
PRP6YBR055C PFY1P07274 126 aa1.2□□□□□ -2.22
PRP6YBR055C YCR101CP25607 182 aa1.2□□□□□ -2.22
PRP6YBR055C UTP11P34247 250 aaPredicted RBP1.2□□□□□ -2.22
PRP6YBR055C YER187WP40102 141 aa1.2□□□□□ -2.22
PRP6YBR055C PRM3Q08931 133 aa1.2□□□□□ -2.22
PRP6YBR055C YPL261CQ08976 102 aa1.2□□□□□ -2.22
PRP6YBR055C VPS13Q07878 3144 aa1.2□□□□□ -2.22
PRP6YBR055C YHR130CP38834 111 aa1.2□□□□□ -2.22
PRP6YBR055C YIL046W-AQ3E7Z4 54 aa1.2□□□□□ -2.22
PRP6YBR055C YLR365WQ7LIF2 110 aa1.2□□□□□ -2.22
PRP6YBR055C OST5Q92316 86 aa1.2□□□□□ -2.22
PRP6YBR055C YBR090CP38253 122 aa1.19□□□□□ -2.22
PRP6YBR055C YEA6P39953 335 aa1.19□□□□□ -2.22
PRP6YBR055C PAU12P53343 120 aa1.19□□□□□ -2.22
PRP6YBR055C UBC5P15732 148 aa1.19□□□□□ -2.22
PRP6YBR055C AIM4P38305 123 aaPredicted RBP1.19□□□□□ -2.22
PRP6YBR055C YLR194CQ05777 254 aa1.19□□□□□ -2.22
PRP6YBR055C COA4Q05809 96 aa1.19□□□□□ -2.22
PRP6YBR055C MED11Q99278 115 aa1.19□□□□□ -2.22
PRP6YBR055C ACC1Q00955 2233 aaKnown RBP1.19□□□□□ -2.22
PRP6YBR055C STT4P37297 1900 aa1.18□□□□□ -2.22
PRP6YBR055C SRX1P36077 127 aa1.18□□□□□ -2.22
PRP6YBR055C CDC39P25655 2108 aaKnown RBP1.18□□□□□ -2.22
PRP6YBR055C YNL122CP53921 115 aaPredicted RBP1.18□□□□□ -2.22
PRP6YBR055C YIL014C-AQ02598 104 aa1.18□□□□□ -2.22
PRP6YBR055C YAR064WP39563 99 aa1.17□□□□□ -2.22
PRP6YBR055C YMR103CQ04436 120 aa1.17□□□□□ -2.22
PRP6YBR055C IRC21Q04772 201 aa1.17□□□□□ -2.22
PRP6YBR055C YOR289WQ12012 251 aaPredicted RBP1.17□□□□□ -2.22
PRP6YBR055C YIR020CP40575 100 aa1.17□□□□□ -2.22
PRP6YBR055C HPA2Q06592 156 aa1.17□□□□□ -2.22
PRP6YBR055C YPL225WQ08971 146 aaKnown RBP1.17□□□□□ -2.22
PRP6YBR055C DAD1Q12248 94 aa1.17□□□□□ -2.22
PRP6YBR055C BRR2P32639 2163 aaKnown RBP1.17□□□□□ -2.22
PRP6YBR055C GTT1P40582 234 aa1.17□□□□□ -2.22
PRP6YBR055C HUR1P45820 110 aa1.17□□□□□ -2.22
PRP6YBR055C RPL22BP56628 122 aaKnown RBP1.17□□□□□ -2.22
PRP6YBR055C PAU2P32612 120 aa1.16□□□□□ -2.22
PRP6YBR055C SWC7Q06707 132 aa1.16□□□□□ -2.22
PRP6YBR055C PCC1Q3E833 88 aa1.16□□□□□ -2.22
PRP6YBR055C YSF3P0C074 85 aaPredicted RBP1.15□□□□□ -2.23
PRP6YBR055C POR2P40478 281 aa1.15□□□□□ -2.23
PRP6YBR055C YJL009WP47078 108 aa1.15□□□□□ -2.23
PRP6YBR055C TOR2P32600 2474 aaKnown RBP1.15□□□□□ -2.23
PRP6YBR055C COX23P38824 151 aa1.15□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms