RNA–Protein interactions for RNA: ENST00000635722.1

CHRNA7-204, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-204ENST00000635722 INTS13Q9NVM9 706 aa22.3■■□□□ 1.16
CHRNA7-204ENST00000635722 CCDC39Q9UFE4 941 aa22.3■■□□□ 1.16
CHRNA7-204ENST00000635722 EBF1Q9UH73 591 aa22.3■■□□□ 1.16
CHRNA7-204ENST00000635722 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.3■■□□□ 1.16
CHRNA7-204ENST00000635722 SRPRBQ9Y5M8 271 aaKnown RBP22.3■■□□□ 1.16
CHRNA7-204ENST00000635722 TNRC6BQ9UPQ9 1833 aaKnown RBP22.29■■□□□ 1.16
CHRNA7-204ENST00000635722 K7EQS6 105 aa22.29■■□□□ 1.16
CHRNA7-204ENST00000635722 CAVIN2O95810 425 aa22.29■■□□□ 1.16
CHRNA7-204ENST00000635722 CYP17A1P05093 508 aa22.29■■□□□ 1.16
CHRNA7-204ENST00000635722 PDGFRBP09619 1106 aa22.29■■□□□ 1.16
CHRNA7-204ENST00000635722 CHRM1P11229 460 aaPredicted RBP22.29■■□□□ 1.16
CHRNA7-204ENST00000635722 HDCP19113 662 aa22.29■■□□□ 1.16
CHRNA7-204ENST00000635722 MAGEA11P43364 429 aa22.29■■□□□ 1.16
CHRNA7-204ENST00000635722 LHX1P48742 406 aa22.29■■□□□ 1.16
CHRNA7-204ENST00000635722 CACNA2D1P54289 1103 aa22.29■■□□□ 1.16
CHRNA7-204ENST00000635722 MDGA1Q8NFP4 955 aa22.29■■□□□ 1.16
CHRNA7-204ENST00000635722 HPDLQ96IR7 371 aa22.29■■□□□ 1.16
CHRNA7-204ENST00000635722 ZDHHC4Q9NPG8 344 aa22.29■■□□□ 1.16
CHRNA7-204ENST00000635722 PANK4Q9NVE7 773 aa22.29■■□□□ 1.16
CHRNA7-204ENST00000635722 SMPD4Q9NXE4 827 aa22.29■■□□□ 1.16
CHRNA7-204ENST00000635722 LEFTY2O00292 366 aa22.28■■□□□ 1.16
CHRNA7-204ENST00000635722 STAT6P42226 847 aa22.28■■□□□ 1.16
CHRNA7-204ENST00000635722 NOVA1P51513 510 aaKnown RBP22.28■■□□□ 1.16
CHRNA7-204ENST00000635722 CYP27A1Q02318 531 aa22.28■■□□□ 1.16
CHRNA7-204ENST00000635722 PMS2CLQ68D20 193 aa22.28■■□□□ 1.16
CHRNA7-204ENST00000635722 C12orf40Q86WS4 652 aa22.28■■□□□ 1.16
CHRNA7-204ENST00000635722 GPD1LQ8N335 351 aa22.28■■□□□ 1.16
CHRNA7-204ENST00000635722 MRPL45Q9BRJ2 306 aaKnown RBP22.28■■□□□ 1.16
CHRNA7-204ENST00000635722 PCDHB13Q9Y5F0 798 aa22.28■■□□□ 1.16
CHRNA7-204ENST00000635722 ZFYVE26Q68DK2 2539 aa22.28■■□□□ 1.16
CHRNA7-204ENST00000635722 RHOBTB1O94844 696 aa22.27■■□□□ 1.16
CHRNA7-204ENST00000635722 NFATC1O95644 943 aa22.27■■□□□ 1.16
CHRNA7-204ENST00000635722 LDHAP00338 332 aaKnown RBP22.27■■□□□ 1.16
CHRNA7-204ENST00000635722 TCF3P15923 654 aa22.27■■□□□ 1.16
CHRNA7-204ENST00000635722 SPINK2P20155 84 aa22.27■■□□□ 1.16
CHRNA7-204ENST00000635722 HOXD13P35453 343 aa22.27■■□□□ 1.16
CHRNA7-204ENST00000635722 MDH1BQ5I0G3 518 aa22.27■■□□□ 1.16
CHRNA7-204ENST00000635722 TMEM92Q6UXU6 159 aa22.27■■□□□ 1.16
CHRNA7-204ENST00000635722 FILIP1Q7Z7B0 1213 aa22.27■■□□□ 1.16
CHRNA7-204ENST00000635722 TTC30AQ86WT1 665 aa22.27■■□□□ 1.16
CHRNA7-204ENST00000635722 FSIP1Q8NA03 581 aa22.27■■□□□ 1.16
CHRNA7-204ENST00000635722 SPATA18Q8TC71 538 aa22.27■■□□□ 1.16
CHRNA7-204ENST00000635722 PCED1BQ96HM7 432 aa22.27■■□□□ 1.16
CHRNA7-204ENST00000635722 ANKRD36BP1Q96IX9 119 aa22.27■■□□□ 1.16
CHRNA7-204ENST00000635722 RNF38Q9H0F5 515 aa22.27■■□□□ 1.16
CHRNA7-204ENST00000635722 MAGEC2Q9UBF1 373 aaPredicted RBP22.27■■□□□ 1.16
CHRNA7-204ENST00000635722 CACNA1GO43497 2377 aa22.27■■□□□ 1.16
CHRNA7-204ENST00000635722 F8VP50 259 aa22.26■■□□□ 1.15
CHRNA7-204ENST00000635722 TOP3BO95985 862 aaKnown RBP22.26■■□□□ 1.15
CHRNA7-204ENST00000635722 GRIK1P39086 918 aa22.26■■□□□ 1.15
CHRNA7-204ENST00000635722 SLC6A11P48066 632 aa22.26■■□□□ 1.15
CHRNA7-204ENST00000635722 C4orf50Q6ZRC1 276 aa22.26■■□□□ 1.15
CHRNA7-204ENST00000635722 RASSF3Q86WH2 238 aa22.26■■□□□ 1.15
CHRNA7-204ENST00000635722 PDILTQ8N807 584 aa22.26■■□□□ 1.15
CHRNA7-204ENST00000635722 FRMD1Q8N878 549 aa22.26■■□□□ 1.15
CHRNA7-204ENST00000635722 SPATA17Q96L03 361 aa22.26■■□□□ 1.15
CHRNA7-204ENST00000635722 DPEP3Q9H4B8 488 aa22.26■■□□□ 1.15
CHRNA7-204ENST00000635722 CDH9Q9ULB4 789 aa22.26■■□□□ 1.15
CHRNA7-204ENST00000635722 CPQQ9Y646 472 aa22.26■■□□□ 1.15
CHRNA7-204ENST00000635722 ZNF840PA6NDX5 716 aa22.25■■□□□ 1.15
CHRNA7-204ENST00000635722 C1QTNF9BB2RNN3 333 aa22.25■■□□□ 1.15
CHRNA7-204ENST00000635722 C1QTNF9P0C862 333 aa22.25■■□□□ 1.15
CHRNA7-204ENST00000635722 WARSP23381 471 aaKnown RBP22.25■■□□□ 1.15
CHRNA7-204ENST00000635722 TXLNAP40222 546 aa22.25■■□□□ 1.15
CHRNA7-204ENST00000635722 ZNF252P-AS1Q0IIN9 211 aa22.25■■□□□ 1.15
CHRNA7-204ENST00000635722 MYO1EQ12965 1108 aa22.25■■□□□ 1.15
CHRNA7-204ENST00000635722 DENND5BQ6ZUT9 1274 aa22.25■■□□□ 1.15
CHRNA7-204ENST00000635722 ALLCQ8N6M5 410 aa22.25■■□□□ 1.15
CHRNA7-204ENST00000635722 RLN3Q8WXF3 142 aa22.25■■□□□ 1.15
CHRNA7-204ENST00000635722 CNOT6LQ96LI5 555 aaKnown RBP22.25■■□□□ 1.15
CHRNA7-204ENST00000635722 USP28Q96RU2 1077 aa22.25■■□□□ 1.15
CHRNA7-204ENST00000635722 TTLL2Q9BWV7 592 aa22.25■■□□□ 1.15
CHRNA7-204ENST00000635722 MMP17Q9ULZ9 603 aa22.25■■□□□ 1.15
CHRNA7-204ENST00000635722 FAM208BQ5VWN6 2430 aa22.25■■□□□ 1.15
CHRNA7-204ENST00000635722 ASCC3Q8N3C0 2202 aaKnown RBP22.25■■□□□ 1.15
CHRNA7-204ENST00000635722 TNNC2P02585 160 aa22.24■■□□□ 1.15
CHRNA7-204ENST00000635722 KDSRQ06136 332 aa22.24■■□□□ 1.15
CHRNA7-204ENST00000635722 IFRD2Q12894 506 aaPredicted RBP22.24■■□□□ 1.15
CHRNA7-204ENST00000635722 FOXC1Q12948 553 aa22.24■■□□□ 1.15
CHRNA7-204ENST00000635722 NR1H3Q13133 447 aa22.24■■□□□ 1.15
CHRNA7-204ENST00000635722 ALCAMQ13740 583 aa22.24■■□□□ 1.15
CHRNA7-204ENST00000635722 SH3PXD2AQ5TCZ1 1133 aa22.24■■□□□ 1.15
CHRNA7-204ENST00000635722 VSTM1Q6UX27 236 aa22.24■■□□□ 1.15
CHRNA7-204ENST00000635722 CCDC73Q6ZRK6 1079 aa22.24■■□□□ 1.15
CHRNA7-204ENST00000635722 ARMCX6Q7L4S7 300 aa22.24■■□□□ 1.15
CHRNA7-204ENST00000635722 CYP2U1Q7Z449 544 aa22.24■■□□□ 1.15
CHRNA7-204ENST00000635722 EXOC4Q96A65 974 aa22.24■■□□□ 1.15
CHRNA7-204ENST00000635722 MMS19Q96T76 1030 aa22.24■■□□□ 1.15
CHRNA7-204ENST00000635722 ZNF518BQ9C0D4 1074 aa22.24■■□□□ 1.15
CHRNA7-204ENST00000635722 HSPBP1Q9NZL4 362 aa22.24■■□□□ 1.15
CHRNA7-204ENST00000635722 TRPM5Q9NZQ8 1165 aa22.24■■□□□ 1.15
CHRNA7-204ENST00000635722 CFAP97Q9P2B7 532 aa22.24■■□□□ 1.15
CHRNA7-204ENST00000635722 SGK1O00141 431 aa22.23■■□□□ 1.15
CHRNA7-204ENST00000635722 CLDN5O00501 218 aa22.23■■□□□ 1.15
CHRNA7-204ENST00000635722 CDX4O14627 284 aaPredicted RBP22.23■■□□□ 1.15
CHRNA7-204ENST00000635722 OLFM2O95897 454 aa22.23■■□□□ 1.15
CHRNA7-204ENST00000635722 ABL1P00519 1130 aa22.23■■□□□ 1.15
CHRNA7-204ENST00000635722 ANXA13P27216 316 aa22.23■■□□□ 1.15
CHRNA7-204ENST00000635722 DHPSP49366 369 aaPredicted RBP22.23■■□□□ 1.15
CHRNA7-204ENST00000635722 CUL4AQ13619 759 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms