RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 OR2W6PQ8NHA6 318 aa23.17■■□□□ 1.3
PNKP-220ENST00000627232 RXFP2Q8WXD0 754 aa23.17■■□□□ 1.3
PNKP-220ENST00000627232 USP18Q9UMW8 372 aa23.17■■□□□ 1.3
PNKP-220ENST00000627232 FGFR1P11362 822 aa23.16■■□□□ 1.3
PNKP-220ENST00000627232 PDGFRAP16234 1089 aa23.16■■□□□ 1.3
PNKP-220ENST00000627232 ADCY8P40145 1251 aa23.16■■□□□ 1.3
PNKP-220ENST00000627232 RPL34P49207 117 aaKnown RBP23.16■■□□□ 1.3
PNKP-220ENST00000627232 VCPP55072 806 aaKnown RBP23.16■■□□□ 1.3
PNKP-220ENST00000627232 LILRA4P59901 499 aa23.16■■□□□ 1.3
PNKP-220ENST00000627232 PDE4CQ08493 712 aa23.16■■□□□ 1.3
PNKP-220ENST00000627232 MGAT3Q09327 533 aa23.16■■□□□ 1.3
PNKP-220ENST00000627232 BBS12Q6ZW61 710 aa23.16■■□□□ 1.3
PNKP-220ENST00000627232 KLHDC9Q8NEP7 349 aa23.16■■□□□ 1.3
PNKP-220ENST00000627232 TNIP3Q96KP6 325 aa23.16■■□□□ 1.3
PNKP-220ENST00000627232 FOXP3Q9BZS1 431 aa23.16■■□□□ 1.3
PNKP-220ENST00000627232 DPEP3Q9H4B8 488 aa23.16■■□□□ 1.3
PNKP-220ENST00000627232 XPNPEP3Q9NQH7 507 aa23.16■■□□□ 1.3
PNKP-220ENST00000627232 FAM105AQ9NUU6 356 aa23.16■■□□□ 1.3
PNKP-220ENST00000627232 RNF19AQ9NV58 838 aa23.16■■□□□ 1.3
PNKP-220ENST00000627232 ANAPC5Q9UJX4 755 aa23.16■■□□□ 1.3
PNKP-220ENST00000627232 DNPEPQ9ULA0 475 aa23.16■■□□□ 1.3
PNKP-220ENST00000627232 NDC80O14777 642 aa23.15■■□□□ 1.3
PNKP-220ENST00000627232 CHRNA1P02708 482 aa23.15■■□□□ 1.3
PNKP-220ENST00000627232 ITGAVP06756 1048 aa23.15■■□□□ 1.3
PNKP-220ENST00000627232 RGS7P49802 495 aa23.15■■□□□ 1.3
PNKP-220ENST00000627232 ITGA8P53708 1063 aa23.15■■□□□ 1.3
PNKP-220ENST00000627232 IFFO1Q0D2I5 559 aa23.15■■□□□ 1.3
PNKP-220ENST00000627232 OASLQ15646 514 aaKnown RBP23.15■■□□□ 1.3
PNKP-220ENST00000627232 FAM47CQ5HY64 1035 aa23.15■■□□□ 1.3
PNKP-220ENST00000627232 KCTD16Q68DU8 428 aa23.15■■□□□ 1.3
PNKP-220ENST00000627232 HOOK3Q86VS8 718 aa23.15■■□□□ 1.3
PNKP-220ENST00000627232 REM2Q8IYK8 340 aaPredicted RBP23.15■■□□□ 1.3
PNKP-220ENST00000627232 ALLCQ8N6M5 410 aa23.15■■□□□ 1.3
PNKP-220ENST00000627232 ACSF2Q96CM8 615 aaPredicted RBP23.15■■□□□ 1.3
PNKP-220ENST00000627232 TMEM109Q9BVC6 243 aa23.15■■□□□ 1.3
PNKP-220ENST00000627232 GPR182O15218 404 aa23.14■■□□□ 1.3
PNKP-220ENST00000627232 ENDOD1O94919 500 aa23.14■■□□□ 1.3
PNKP-220ENST00000627232 DESP17661 470 aa23.14■■□□□ 1.3
PNKP-220ENST00000627232 TRIM32Q13049 653 aa23.14■■□□□ 1.3
PNKP-220ENST00000627232 NOGQ13253 232 aa23.14■■□□□ 1.3
PNKP-220ENST00000627232 TRNP1Q6NT89 227 aa23.14■■□□□ 1.3
PNKP-220ENST00000627232 CEP128Q6ZU80 1094 aa23.14■■□□□ 1.3
PNKP-220ENST00000627232 PAXIP1Q6ZW49 1069 aaPredicted RBP23.14■■□□□ 1.3
PNKP-220ENST00000627232 ARCQ7LC44 396 aa23.14■■□□□ 1.3
PNKP-220ENST00000627232 GSTA5Q7RTV2 222 aa23.14■■□□□ 1.3
PNKP-220ENST00000627232 ADGRF2Q8IZF7 708 aa23.14■■□□□ 1.3
PNKP-220ENST00000627232 SH2D3CQ8N5H7 860 aa23.14■■□□□ 1.3
PNKP-220ENST00000627232 KCTD6Q8NC69 237 aa23.14■■□□□ 1.3
PNKP-220ENST00000627232 SLC35B2Q8TB61 432 aa23.14■■□□□ 1.3
PNKP-220ENST00000627232 WNT8BQ93098 351 aa23.14■■□□□ 1.3
PNKP-220ENST00000627232 FAM118BQ9BPY3 351 aa23.14■■□□□ 1.3
PNKP-220ENST00000627232 SEMA4AQ9H3S1 761 aa23.14■■□□□ 1.3
PNKP-220ENST00000627232 GOLGA2P5Q9HBQ8 144 aa23.14■■□□□ 1.3
PNKP-220ENST00000627232 ZNF148Q9UQR1 794 aa23.14■■□□□ 1.3
PNKP-220ENST00000627232 TULP2O00295 520 aa23.13■■□□□ 1.29
PNKP-220ENST00000627232 ASGR1P07306 291 aa23.13■■□□□ 1.29
PNKP-220ENST00000627232 NR1D1P20393 614 aa23.13■■□□□ 1.29
PNKP-220ENST00000627232 ACTN2P35609 894 aa23.13■■□□□ 1.29
PNKP-220ENST00000627232 ACADSBP45954 432 aa23.13■■□□□ 1.29
PNKP-220ENST00000627232 TRIP13Q15645 432 aaPredicted RBP23.13■■□□□ 1.29
PNKP-220ENST00000627232 SMTNL2Q2TAL5 461 aa23.13■■□□□ 1.29
PNKP-220ENST00000627232 KRT71Q3SY84 523 aa23.13■■□□□ 1.29
PNKP-220ENST00000627232 CCSAPQ6IQ19 270 aaPredicted RBP23.13■■□□□ 1.29
PNKP-220ENST00000627232 CYP4F22Q6NT55 531 aa23.13■■□□□ 1.29
PNKP-220ENST00000627232 CAPS2Q9BXY5 557 aa23.13■■□□□ 1.29
PNKP-220ENST00000627232 RSAD1Q9HA92 442 aa23.13■■□□□ 1.29
PNKP-220ENST00000627232 AAASQ9NRG9 546 aa23.13■■□□□ 1.29
PNKP-220ENST00000627232 PCSK1NQ9UHG2 260 aa23.13■■□□□ 1.29
PNKP-220ENST00000627232 PAPSS1O43252 624 aaPredicted RBP23.13■■□□□ 1.29
PNKP-220ENST00000627232 RIPK2O43353 540 aa23.13■■□□□ 1.29
PNKP-220ENST00000627232 PDGFRBP09619 1106 aa23.13■■□□□ 1.29
PNKP-220ENST00000627232 LMO2P25791 158 aa23.13■■□□□ 1.29
PNKP-220ENST00000627232 KCNT1Q5JUK3 1230 aa23.13■■□□□ 1.29
PNKP-220ENST00000627232 LEKR1Q6ZMV7 388 aa23.13■■□□□ 1.29
PNKP-220ENST00000627232 MRPL10Q7Z7H8 261 aaKnown RBP23.13■■□□□ 1.29
PNKP-220ENST00000627232 ARFGAP2Q8N6H7 521 aa23.13■■□□□ 1.29
PNKP-220ENST00000627232 PCSK9Q8NBP7 692 aaKnown RBP23.13■■□□□ 1.29
PNKP-220ENST00000627232 KHSRPQ92945 711 aaKnown RBP eCLIP23.13■■□□□ 1.29
PNKP-220ENST00000627232 PIWIL1Q96J94 861 aaKnown RBP23.13■■□□□ 1.29
PNKP-220ENST00000627232 HSFY1Q96LI6 401 aa23.13■■□□□ 1.29
PNKP-220ENST00000627232 GIT1Q9Y2X7 761 aa23.13■■□□□ 1.29
PNKP-220ENST00000627232 PIK3R2O00459 728 aa23.12■■□□□ 1.29
PNKP-220ENST00000627232 PRPSAP2O60256 369 aa23.12■■□□□ 1.29
PNKP-220ENST00000627232 CST8O60676 142 aa23.12■■□□□ 1.29
PNKP-220ENST00000627232 GABBR2O75899 941 aa23.12■■□□□ 1.29
PNKP-220ENST00000627232 CCDC130P13994 396 aa23.12■■□□□ 1.29
PNKP-220ENST00000627232 CCND3P30281 292 aaPredicted RBP23.12■■□□□ 1.29
PNKP-220ENST00000627232 SDC4P31431 198 aa23.12■■□□□ 1.29
PNKP-220ENST00000627232 SP3Q02447 781 aa23.12■■□□□ 1.29
PNKP-220ENST00000627232 SLC29A2Q14542 456 aa23.12■■□□□ 1.29
PNKP-220ENST00000627232 KCNA10Q16322 511 aa23.12■■□□□ 1.29
PNKP-220ENST00000627232 CCDC14Q49A88 953 aa23.12■■□□□ 1.29
PNKP-220ENST00000627232 BOLA3Q53S33 107 aa23.12■■□□□ 1.29
PNKP-220ENST00000627232 IZUMO3Q5VZ72 239 aa23.12■■□□□ 1.29
PNKP-220ENST00000627232 CYP4V2Q6ZWL3 525 aaPredicted RBP23.12■■□□□ 1.29
PNKP-220ENST00000627232 OSTM1Q86WC4 334 aa23.12■■□□□ 1.29
PNKP-220ENST00000627232 TEKT4Q8WW24 435 aa23.12■■□□□ 1.29
PNKP-220ENST00000627232 PEBP4Q96S96 227 aa23.12■■□□□ 1.29
PNKP-220ENST00000627232 TSPYL2Q9H2G4 693 aaPredicted RBP23.12■■□□□ 1.29
PNKP-220ENST00000627232 HCRTO43612 131 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 339.6 ms