RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 SMTNL2Q2TAL5 461 aa10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 ODF2Q5BJF6 829 aa10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 TRNP1Q6NT89 227 aa10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 MFSD7Q6UXD7 560 aa10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 DSTYKQ6XUX3 929 aa10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 POLNQ7Z5Q5 900 aa10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 TMEM110Q86TL2 294 aa10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 ZNF598Q86UK7 904 aaKnown RBP10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 CCDC105Q8IYK2 499 aa10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 EIF1ADQ8N9N8 165 aaKnown RBP10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 STK32AQ8WU08 396 aa10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 ATG4AQ8WYN0 398 aa10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 LRRC19Q9H756 370 aa10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 ZWILCHQ9H900 591 aa10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 UBN1Q9NPG3 1134 aa10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 CHST7Q9NS84 486 aa10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 DDX43Q9NXZ2 648 aaKnown RBP10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 DDX56Q9NY93 547 aaKnown RBP10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 R3HDM2Q9Y2K5 976 aaKnown RBP10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 PTPN22Q9Y2R2 807 aa10.53□□□□□ -0.72
AL353770.3-201ENST00000616253 LRRD1A4D1F6 860 aa10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 PAPSS1O43252 624 aaPredicted RBP10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 FAM163BP0C2L3 166 aa10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 IL1R2P27930 398 aa10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 FLT3P36888 993 aa10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 KCNJ1P48048 391 aa10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 ZNF143P52747 638 aaPredicted RBP10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 SNX16P57768 344 aa10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 SLC6A3Q01959 620 aa10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 SNX1Q13596 522 aa10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 TAF5Q15542 800 aa10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 HADHQ16836 314 aaKnown RBP10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 MDH1BQ5I0G3 518 aa10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 KIAA0319Q5VV43 1072 aa10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 DUPD1Q68J44 220 aa10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 SPOCD1Q6ZMY3 1216 aa10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 TMEM86AQ8N2M4 240 aa10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 RXFP2Q8WXD0 754 aa10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 LINC01599Q8WXQ3 324 aa10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 RAPGEF5Q92565 580 aa10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 ERP44Q9BS26 406 aa10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 B3GNT5Q9BYG0 378 aa10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 UBXN6Q9BZV1 441 aa10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 DCLK3Q9C098 648 aa10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 NEUROG2Q9H2A3 272 aa10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 ACBD3Q9H3P7 528 aa10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 FAM114A2Q9NRY5 505 aa10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 ASNSD1Q9NWL6 643 aa10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 TIMM13Q9Y5L4 95 aaPredicted RBP10.52□□□□□ -0.72
AL353770.3-201ENST00000616253 DNM1LO00429 736 aa10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 CLDN5O00501 218 aa10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 RNF8O76064 485 aa10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 ECEL1O95672 775 aa10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 KRT7P08729 469 aa10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 KRT10P13645 584 aa10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 PDGFRAP16234 1089 aa10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 PTPN1P18031 435 aaKnown RBP10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 MIPP30301 263 aa10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 AARSP49588 968 aaKnown RBP eCLIP10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 CDR1P51861 262 aa10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 TUSC3Q13454 348 aa10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 ACAP1Q15027 740 aa10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 C15orf59Q2T9L4 293 aaPredicted RBP10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 PAN2Q504Q3 1202 aaKnown RBP10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 TIGD5Q53EQ6 642 aa10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 KCNT1Q5JUK3 1230 aa10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 KAZNQ674X7 775 aa10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 LRRC8DQ7L1W4 858 aa10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 CTU1Q7Z7A3 348 aaKnown RBP10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 RTN4RL1Q86UN2 441 aaPredicted RBP10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 ZDHHC17Q8IUH5 632 aa10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 SCUBE3Q8IX30 993 aa10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 FUKQ8N0W3 1084 aa10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 TSEN2Q8NCE0 465 aaKnown RBP10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 CLEC4CQ8WTT0 213 aa10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 HNRNPABQ99729 332 aaKnown RBP10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 CNPY3Q9BT09 278 aa10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 RGS18Q9NS28 235 aa10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 PCSK1NQ9UHG2 260 aa10.52□□□□□ -0.73
AL353770.3-201ENST00000616253 hCG_1818297A0A087WSY0 165 aa10.51□□□□□ -0.73
AL353770.3-201ENST00000616253 C9IYK1 514 aa10.51□□□□□ -0.73
AL353770.3-201ENST00000616253 H3BQF6 201 aa10.51□□□□□ -0.73
AL353770.3-201ENST00000616253 I3L4J1 428 aa10.51□□□□□ -0.73
AL353770.3-201ENST00000616253 DPYSL4O14531 572 aa10.51□□□□□ -0.73
AL353770.3-201ENST00000616253 XPO1O14980 1071 aaKnown RBP10.51□□□□□ -0.73
AL353770.3-201ENST00000616253 B3GAT3O94766 335 aa10.51□□□□□ -0.73
AL353770.3-201ENST00000616253 ODC1P11926 461 aa10.51□□□□□ -0.73
AL353770.3-201ENST00000616253 LCP1P13796 627 aa10.51□□□□□ -0.73
AL353770.3-201ENST00000616253 SELPP16109 830 aa10.51□□□□□ -0.73
AL353770.3-201ENST00000616253 PTPN7P35236 360 aa10.51□□□□□ -0.73
AL353770.3-201ENST00000616253 LHX1P48742 406 aa10.51□□□□□ -0.73
AL353770.3-201ENST00000616253 RPL34P49207 117 aaKnown RBP10.51□□□□□ -0.73
AL353770.3-201ENST00000616253 COPS2P61201 443 aa10.51□□□□□ -0.73
AL353770.3-201ENST00000616253 ADCY2Q08462 1091 aa10.51□□□□□ -0.73
AL353770.3-201ENST00000616253 GPS2Q13227 327 aa10.51□□□□□ -0.73
AL353770.3-201ENST00000616253 CDO1Q16878 200 aa10.51□□□□□ -0.73
AL353770.3-201ENST00000616253 TFDP3Q5H9I0 405 aa10.51□□□□□ -0.73
AL353770.3-201ENST00000616253 SH3PXD2AQ5TCZ1 1133 aa10.51□□□□□ -0.73
AL353770.3-201ENST00000616253 HASPINQ8TF76 798 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms