RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 DDIT3P35638 169 aa16.3■□□□□ 0.2
ACTN4-211ENST00000589528 GRIK1P39086 918 aa16.3■□□□□ 0.2
ACTN4-211ENST00000589528 ATXN3P54252 364 aaPredicted RBP16.3■□□□□ 0.2
ACTN4-211ENST00000589528 RBP5P82980 135 aa16.3■□□□□ 0.2
ACTN4-211ENST00000589528 MYO1EQ12965 1108 aa16.3■□□□□ 0.2
ACTN4-211ENST00000589528 BYSLQ13895 437 aaKnown RBP16.3■□□□□ 0.2
ACTN4-211ENST00000589528 MAPRE1Q15691 268 aaKnown RBP16.3■□□□□ 0.2
ACTN4-211ENST00000589528 CCDC142Q17RM4 750 aa16.3■□□□□ 0.2
ACTN4-211ENST00000589528 PGBD3Q8N328 593 aa16.3■□□□□ 0.2
ACTN4-211ENST00000589528 RLN3Q8WXF3 142 aa16.3■□□□□ 0.2
ACTN4-211ENST00000589528 ANKRD36BP1Q96IX9 119 aa16.3■□□□□ 0.2
ACTN4-211ENST00000589528 PKMYT1Q99640 499 aa16.3■□□□□ 0.2
ACTN4-211ENST00000589528 SYT15Q9BQS2 421 aa16.3■□□□□ 0.2
ACTN4-211ENST00000589528 GDAP2Q9NXN4 497 aa16.3■□□□□ 0.2
ACTN4-211ENST00000589528 EHD2Q9NZN4 543 aa16.3■□□□□ 0.2
ACTN4-211ENST00000589528 TBC1D7Q9P0N9 293 aa16.3■□□□□ 0.2
ACTN4-211ENST00000589528 SEL1LQ9UBV2 794 aa16.3■□□□□ 0.2
ACTN4-211ENST00000589528 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.29■□□□□ 0.2
ACTN4-211ENST00000589528 SLC9A3R1O14745 358 aaPredicted RBP16.29■□□□□ 0.2
ACTN4-211ENST00000589528 HCRTO43612 131 aa16.29■□□□□ 0.2
ACTN4-211ENST00000589528 GCNT3O95395 438 aa16.29■□□□□ 0.2
ACTN4-211ENST00000589528 CFIP05156 583 aa16.29■□□□□ 0.2
ACTN4-211ENST00000589528 PFKLP17858 780 aa16.29■□□□□ 0.2
ACTN4-211ENST00000589528 BDNFP23560 247 aa16.29■□□□□ 0.2
ACTN4-211ENST00000589528 GJB2P29033 226 aa16.29■□□□□ 0.2
ACTN4-211ENST00000589528 RDXP35241 583 aaKnown RBP16.29■□□□□ 0.2
ACTN4-211ENST00000589528 DPP6P42658 865 aa16.29■□□□□ 0.2
ACTN4-211ENST00000589528 MAGEA11P43364 429 aa16.29■□□□□ 0.2
ACTN4-211ENST00000589528 CYP27A1Q02318 531 aa16.29■□□□□ 0.2
ACTN4-211ENST00000589528 RESTQ13127 1097 aa16.29■□□□□ 0.2
ACTN4-211ENST00000589528 EOGTQ5NDL2 527 aa16.29■□□□□ 0.2
ACTN4-211ENST00000589528 L1TD1Q5T7N2 865 aaKnown RBP16.29■□□□□ 0.2
ACTN4-211ENST00000589528 VSTM1Q6UX27 236 aa16.29■□□□□ 0.2
ACTN4-211ENST00000589528 DENND5BQ6ZUT9 1274 aa16.29■□□□□ 0.2
ACTN4-211ENST00000589528 FILIP1Q7Z7B0 1213 aa16.29■□□□□ 0.2
ACTN4-211ENST00000589528 OSTM1Q86WC4 334 aa16.29■□□□□ 0.2
ACTN4-211ENST00000589528 SYT12Q8IV01 421 aa16.29■□□□□ 0.2
ACTN4-211ENST00000589528 TMEFF1Q8IYR6 380 aa16.29■□□□□ 0.2
ACTN4-211ENST00000589528 ALLCQ8N6M5 410 aa16.29■□□□□ 0.2
ACTN4-211ENST00000589528 TXNDC5Q8NBS9 432 aaKnown RBP16.29■□□□□ 0.2
ACTN4-211ENST00000589528 HMGB4Q8WW32 186 aa16.29■□□□□ 0.2
ACTN4-211ENST00000589528 PNKPQ96T60 521 aa16.29■□□□□ 0.2
ACTN4-211ENST00000589528 MTMR12Q9C0I1 747 aa16.29■□□□□ 0.2
ACTN4-211ENST00000589528 CDH9Q9ULB4 789 aa16.29■□□□□ 0.2
ACTN4-211ENST00000589528 WASF3Q9UPY6 502 aa16.29■□□□□ 0.2
ACTN4-211ENST00000589528 WDFY3Q8IZQ1 3526 aa16.29■□□□□ 0.2
ACTN4-211ENST00000589528 ZZEF1O43149 2961 aa16.29■□□□□ 0.2
ACTN4-211ENST00000589528 SPEGQ15772 3267 aa16.29■□□□□ 0.2
ACTN4-211ENST00000589528 GOLGA8IPA6NC78 632 aa16.28■□□□□ 0.2
ACTN4-211ENST00000589528 GOLGA8JA6NMD2 632 aa16.28■□□□□ 0.2
ACTN4-211ENST00000589528 SRRM3A6NNA2 597 aaPredicted RBP16.28■□□□□ 0.2
ACTN4-211ENST00000589528 TNFRSF10BO14763 440 aa16.28■□□□□ 0.2
ACTN4-211ENST00000589528 HYAL3O43820 417 aaPredicted RBP16.28■□□□□ 0.2
ACTN4-211ENST00000589528 CYP17A1P05093 508 aa16.28■□□□□ 0.2
ACTN4-211ENST00000589528 GAP43P17677 238 aa16.28■□□□□ 0.2
ACTN4-211ENST00000589528 P2RY2P41231 377 aa16.28■□□□□ 0.2
ACTN4-211ENST00000589528 WNT7BP56706 349 aa16.28■□□□□ 0.2
ACTN4-211ENST00000589528 PSMC1P62191 440 aaKnown RBP16.28■□□□□ 0.2
ACTN4-211ENST00000589528 SOWAHAQ2M3V2 549 aa16.28■□□□□ 0.2
ACTN4-211ENST00000589528 HSF5Q4G112 596 aaPredicted RBP16.28■□□□□ 0.2
ACTN4-211ENST00000589528 LYSMD4Q5XG99 296 aa16.28■□□□□ 0.2
ACTN4-211ENST00000589528 TMEM92Q6UXU6 159 aa16.28■□□□□ 0.2
ACTN4-211ENST00000589528 HDDC3Q8N4P3 179 aa16.28■□□□□ 0.2
ACTN4-211ENST00000589528 GATA6Q92908 595 aa16.28■□□□□ 0.2
ACTN4-211ENST00000589528 MYLPFQ96A32 169 aa16.28■□□□□ 0.2
ACTN4-211ENST00000589528 SPATA17Q96L03 361 aa16.28■□□□□ 0.2
ACTN4-211ENST00000589528 PDE11AQ9HCR9 933 aa16.28■□□□□ 0.2
ACTN4-211ENST00000589528 SMPD4Q9NXE4 827 aa16.28■□□□□ 0.2
ACTN4-211ENST00000589528 PPP4R2Q9NY27 417 aa16.28■□□□□ 0.2
ACTN4-211ENST00000589528 CCDC39Q9UFE4 941 aa16.28■□□□□ 0.2
ACTN4-211ENST00000589528 PCDHB13Q9Y5F0 798 aa16.28■□□□□ 0.2
ACTN4-211ENST00000589528 CACNA1EQ15878 2313 aa16.28■□□□□ 0.2
ACTN4-211ENST00000589528 ATXN2Q99700 1313 aaKnown RBP16.27■□□□□ 0.2
ACTN4-211ENST00000589528 GABRDO14764 452 aa16.27■□□□□ 0.2
ACTN4-211ENST00000589528 TRIM66O15016 1216 aa16.27■□□□□ 0.2
ACTN4-211ENST00000589528 ATP2C2O75185 946 aa16.27■□□□□ 0.2
ACTN4-211ENST00000589528 KAT7O95251 611 aa16.27■□□□□ 0.2
ACTN4-211ENST00000589528 ADH1CP00326 375 aa16.27■□□□□ 0.2
ACTN4-211ENST00000589528 TNNC2P02585 160 aa16.27■□□□□ 0.2
ACTN4-211ENST00000589528 ENGP17813 658 aa16.27■□□□□ 0.2
ACTN4-211ENST00000589528 GARTP22102 1010 aa16.27■□□□□ 0.2
ACTN4-211ENST00000589528 PPP3CCP48454 512 aa16.27■□□□□ 0.2
ACTN4-211ENST00000589528 SIM1P81133 766 aaPredicted RBP16.27■□□□□ 0.2
ACTN4-211ENST00000589528 GRIN1Q05586 938 aa16.27■□□□□ 0.2
ACTN4-211ENST00000589528 KDSRQ06136 332 aa16.27■□□□□ 0.2
ACTN4-211ENST00000589528 KCNA1Q09470 495 aa16.27■□□□□ 0.2
ACTN4-211ENST00000589528 DHCR24Q15392 516 aa16.27■□□□□ 0.2
ACTN4-211ENST00000589528 FAM171BQ6P995 826 aa16.27■□□□□ 0.2
ACTN4-211ENST00000589528 DDX42Q86XP3 938 aaKnown RBP eCLIP16.27■□□□□ 0.2
ACTN4-211ENST00000589528 IL17RCQ8NAC3 791 aa16.27■□□□□ 0.2
ACTN4-211ENST00000589528 ZSWIM2Q8NEG5 633 aa16.27■□□□□ 0.2
ACTN4-211ENST00000589528 OLIG1Q8TAK6 271 aa16.27■□□□□ 0.2
ACTN4-211ENST00000589528 CEP295NLQ96MC4 621 aa16.27■□□□□ 0.2
ACTN4-211ENST00000589528 MMS19Q96T76 1030 aa16.27■□□□□ 0.2
ACTN4-211ENST00000589528 GTPBP2Q9BX10 602 aaKnown RBP16.27■□□□□ 0.2
ACTN4-211ENST00000589528 TMEM121BQ9BXQ6 578 aaPredicted RBP16.27■□□□□ 0.2
ACTN4-211ENST00000589528 PCIF1Q9H4Z3 704 aa16.27■□□□□ 0.2
ACTN4-211ENST00000589528 ARHGEF4Q9NR80 690 aa16.27■□□□□ 0.2
ACTN4-211ENST00000589528 STK17AQ9UEE5 414 aa16.27■□□□□ 0.2
ACTN4-211ENST00000589528 NEUROG3Q9Y4Z2 214 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms