RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 DENND1BQ6P3S1 775 aa14.4□□□□□ -0.1
VMP1-203ENST00000586245 TRIM72Q6ZMU5 477 aa14.4□□□□□ -0.1
VMP1-203ENST00000586245 ITIH5Q86UX2 942 aa14.4□□□□□ -0.1
VMP1-203ENST00000586245 VPS36Q86VN1 386 aa14.4□□□□□ -0.1
VMP1-203ENST00000586245 PASD1Q8IV76 773 aa14.4□□□□□ -0.1
VMP1-203ENST00000586245 TMEM35BQ8NCS4 154 aa14.4□□□□□ -0.1
VMP1-203ENST00000586245 GIPC2Q8TF65 315 aa14.4□□□□□ -0.1
VMP1-203ENST00000586245 SLC20A1Q8WUM9 679 aa14.4□□□□□ -0.1
VMP1-203ENST00000586245 DDX1Q92499 740 aaKnown RBP14.4□□□□□ -0.1
VMP1-203ENST00000586245 SECISBP2LQ93073 1101 aaKnown RBP14.4□□□□□ -0.1
VMP1-203ENST00000586245 SPATA17Q96L03 361 aa14.4□□□□□ -0.1
VMP1-203ENST00000586245 ZNF512Q96ME7 567 aaPredicted RBP14.4□□□□□ -0.1
VMP1-203ENST00000586245 KCNK16Q96T55 309 aa14.4□□□□□ -0.1
VMP1-203ENST00000586245 AGPAT1Q99943 283 aa14.4□□□□□ -0.1
VMP1-203ENST00000586245 UBXN6Q9BZV1 441 aa14.4□□□□□ -0.1
VMP1-203ENST00000586245 LHX5Q9H2C1 402 aa14.4□□□□□ -0.1
VMP1-203ENST00000586245 HAUS4Q9H6D7 363 aa14.4□□□□□ -0.1
VMP1-203ENST00000586245 PNPLA8Q9NP80 782 aa14.4□□□□□ -0.1
VMP1-203ENST00000586245 SEPT11Q9NVA2 429 aaKnown RBP14.4□□□□□ -0.1
VMP1-203ENST00000586245 ASB3Q9Y575 518 aa14.4□□□□□ -0.1
VMP1-203ENST00000586245 CCDC195A0A1B0GUA6 201 aa14.39□□□□□ -0.11
VMP1-203ENST00000586245 CCL16O15467 120 aa14.39□□□□□ -0.11
VMP1-203ENST00000586245 RFPL2O75678 378 aa14.39□□□□□ -0.11
VMP1-203ENST00000586245 BEST1O76090 585 aa14.39□□□□□ -0.11
VMP1-203ENST00000586245 LSM8O95777 96 aaKnown RBP14.39□□□□□ -0.11
VMP1-203ENST00000586245 CFHP08603 1231 aa14.39□□□□□ -0.11
VMP1-203ENST00000586245 CSH1P0DML2 217 aa14.39□□□□□ -0.11
VMP1-203ENST00000586245 CSH2P0DML3 217 aa14.39□□□□□ -0.11
VMP1-203ENST00000586245 HOXB8P17481 243 aaPredicted RBP14.39□□□□□ -0.11
VMP1-203ENST00000586245 ATF6P18850 670 aa14.39□□□□□ -0.11
VMP1-203ENST00000586245 FMO1Q01740 532 aa14.39□□□□□ -0.11
VMP1-203ENST00000586245 PKDCCQ504Y2 493 aa14.39□□□□□ -0.11
VMP1-203ENST00000586245 TC2NQ8N9U0 490 aa14.39□□□□□ -0.11
VMP1-203ENST00000586245 ZMIZ2Q8NF64 920 aa14.39□□□□□ -0.11
VMP1-203ENST00000586245 CMASQ8NFW8 434 aaPredicted RBP14.39□□□□□ -0.11
VMP1-203ENST00000586245 GPR152Q8TDT2 470 aa14.39□□□□□ -0.11
VMP1-203ENST00000586245 NOX5Q96PH1 765 aa14.39□□□□□ -0.11
VMP1-203ENST00000586245 PRKD2Q9BZL6 878 aa14.39□□□□□ -0.11
VMP1-203ENST00000586245 PIDD1Q9HB75 910 aa14.39□□□□□ -0.11
VMP1-203ENST00000586245 TMEM30AQ9NV96 361 aa14.39□□□□□ -0.11
VMP1-203ENST00000586245 EHD2Q9NZN4 543 aa14.39□□□□□ -0.11
VMP1-203ENST00000586245 SLC38A8A6NNN8 435 aa14.38□□□□□ -0.11
VMP1-203ENST00000586245 RTN3O95197 1032 aaPredicted RBP14.38□□□□□ -0.11
VMP1-203ENST00000586245 POU2F2P09086 479 aa14.38□□□□□ -0.11
VMP1-203ENST00000586245 CHRNB2P17787 502 aa14.38□□□□□ -0.11
VMP1-203ENST00000586245 GPD2P43304 727 aa14.38□□□□□ -0.11
VMP1-203ENST00000586245 PLA2G4AP47712 749 aa14.38□□□□□ -0.11
VMP1-203ENST00000586245 SLC5A3P53794 718 aa14.38□□□□□ -0.11
VMP1-203ENST00000586245 GSDMDP57764 484 aa14.38□□□□□ -0.11
VMP1-203ENST00000586245 COL19A1Q14993 1142 aa14.38□□□□□ -0.11
VMP1-203ENST00000586245 RARS2Q5T160 578 aaKnown RBP14.38□□□□□ -0.11
VMP1-203ENST00000586245 TMC5Q6UXY8 1006 aa14.38□□□□□ -0.11
VMP1-203ENST00000586245 CYP26C1Q6V0L0 522 aa14.38□□□□□ -0.11
VMP1-203ENST00000586245 ZNF571Q7Z3V5 609 aaPredicted RBP14.38□□□□□ -0.11
VMP1-203ENST00000586245 PIGZQ86VD9 579 aa14.38□□□□□ -0.11
VMP1-203ENST00000586245 NUP93Q8N1F7 819 aa14.38□□□□□ -0.11
VMP1-203ENST00000586245 C12orf76Q8N812 135 aaPredicted RBP14.38□□□□□ -0.11
VMP1-203ENST00000586245 SMG7Q92540 1137 aaKnown RBP14.38□□□□□ -0.11
VMP1-203ENST00000586245 PSMG2Q969U7 264 aa14.38□□□□□ -0.11
VMP1-203ENST00000586245 PANX2Q96RD6 677 aa14.38□□□□□ -0.11
VMP1-203ENST00000586245 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.38□□□□□ -0.11
VMP1-203ENST00000586245 LRRC4Q9HBW1 653 aa14.38□□□□□ -0.11
VMP1-203ENST00000586245 PTPRDP23468 1912 aa14.37□□□□□ -0.11
VMP1-203ENST00000586245 MTCL1Q9Y4B5 1905 aaKnown RBP14.37□□□□□ -0.11
VMP1-203ENST00000586245 TBX10O75333 385 aa14.37□□□□□ -0.11
VMP1-203ENST00000586245 PTPN2P17706 415 aa14.37□□□□□ -0.11
VMP1-203ENST00000586245 ACADSBP45954 432 aa14.37□□□□□ -0.11
VMP1-203ENST00000586245 RGS7P49802 495 aa14.37□□□□□ -0.11
VMP1-203ENST00000586245 SNX16P57768 344 aa14.37□□□□□ -0.11
VMP1-203ENST00000586245 ITIH3Q06033 890 aa14.37□□□□□ -0.11
VMP1-203ENST00000586245 HGSNATQ68CP4 663 aa14.37□□□□□ -0.11
VMP1-203ENST00000586245 CES5AQ6NT32 575 aa14.37□□□□□ -0.11
VMP1-203ENST00000586245 WDR59Q6PJI9 974 aa14.37□□□□□ -0.11
VMP1-203ENST00000586245 DENND5BQ6ZUT9 1274 aa14.37□□□□□ -0.11
VMP1-203ENST00000586245 DNAJB7Q7Z6W7 309 aaPredicted RBP14.37□□□□□ -0.11
VMP1-203ENST00000586245 MSANTD4Q8NCY6 345 aa14.37□□□□□ -0.11
VMP1-203ENST00000586245 C1orf131Q8NDD1 294 aaKnown RBP14.37□□□□□ -0.11
VMP1-203ENST00000586245 STK32AQ8WU08 396 aa14.37□□□□□ -0.11
VMP1-203ENST00000586245 SLC35F5Q8WV83 523 aa14.37□□□□□ -0.11
VMP1-203ENST00000586245 HSFY1Q96LI6 401 aa14.37□□□□□ -0.11
VMP1-203ENST00000586245 DEF6Q9H4E7 631 aa14.37□□□□□ -0.11
VMP1-203ENST00000586245 ST7Q9NRC1 585 aa14.37□□□□□ -0.11
VMP1-203ENST00000586245 COMMD8Q9NX08 183 aa14.37□□□□□ -0.11
VMP1-203ENST00000586245 CLEC1BQ9P126 229 aa14.37□□□□□ -0.11
VMP1-203ENST00000586245 ARHGAP20Q9P2F6 1191 aa14.37□□□□□ -0.11
VMP1-203ENST00000586245 UXTQ9UBK9 157 aaPredicted RBP14.37□□□□□ -0.11
VMP1-203ENST00000586245 MAGED2Q9UNF1 606 aaPredicted RBP14.37□□□□□ -0.11
VMP1-203ENST00000586245 SSU72P8A0A1W2PR75 194 aa14.36□□□□□ -0.11
VMP1-203ENST00000586245 HHLA1C9JL84 531 aa14.36□□□□□ -0.11
VMP1-203ENST00000586245 TULP2O00295 520 aa14.36□□□□□ -0.11
VMP1-203ENST00000586245 TNFRSF10BO14763 440 aa14.36□□□□□ -0.11
VMP1-203ENST00000586245 CYP1A1P04798 512 aaPredicted RBP14.36□□□□□ -0.11
VMP1-203ENST00000586245 YWHAQP27348 245 aa14.36□□□□□ -0.11
VMP1-203ENST00000586245 CDH5P33151 784 aaPredicted RBP14.36□□□□□ -0.11
VMP1-203ENST00000586245 NOMO3P69849 1222 aa14.36□□□□□ -0.11
VMP1-203ENST00000586245 CDK17Q00537 523 aa14.36□□□□□ -0.11
VMP1-203ENST00000586245 DLX2Q07687 328 aaPredicted RBP14.36□□□□□ -0.11
VMP1-203ENST00000586245 IFRD2Q12894 506 aaPredicted RBP14.36□□□□□ -0.11
VMP1-203ENST00000586245 PDCLQ13371 301 aa14.36□□□□□ -0.11
VMP1-203ENST00000586245 MTMR3Q13615 1198 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms