RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 CCDC192P0DO97 292 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 HAPLN1P10915 354 aaPredicted RBP8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 ARSAP15289 507 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 HOXA6P31267 233 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 AVPR1AP37288 418 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 TUFMP49411 452 aaKnown RBP8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 TAF6P49848 677 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 ZNF131P52739 623 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 NNTQ13423 1086 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 RUNX3Q13761 415 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 TAF12Q16514 161 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 ZC2HC1CQ53FD0 456 aaPredicted RBP8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 OXLD1Q5BKU9 147 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 TMEM196Q5HYL7 178 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 SDHAF4Q5VUM1 108 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 WSCD1Q658N2 575 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 NAIF1Q69YI7 327 aaPredicted RBP8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 TMEM150AQ86TG1 271 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 KBTBD6Q86V97 674 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 METTL23Q86XA0 190 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 EFCAB13Q8IY85 973 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 CMTM8Q8IZV2 173 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 MAB21L3Q8N8X9 362 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 C12orf50Q8NA57 414 aaPredicted RBP8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 SPPL2BQ8TCT7 592 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 USP13Q92995 863 aaPredicted RBP8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 CHAMP1Q96JM3 812 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 TSPAN18Q96SJ8 248 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 FAM83CQ9BQN1 747 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 ARHGAP9Q9BRR9 750 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 IKZF4Q9H2S9 585 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 PARVGQ9HBI0 331 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 GKN1Q9NS71 199 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 BLOC1S4Q9NUP1 217 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 TMLHEQ9NVH6 421 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 THG1LQ9NWX6 298 aaKnown RBP8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 PPP4R2Q9NY27 417 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 DSEQ9UL01 958 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 SLC8A2Q9UPR5 921 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 DERAQ9Y315 318 aa8.4□□□□□ -1.06
SMCHD1-210ENST00000583800 ZFHX4Q86UP3 3567 aa8.4□□□□□ -1.07
SMCHD1-210ENST00000583800 MYOFQ9NZM1 2061 aa8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 FOXD2O60548 495 aaPredicted RBP8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 TBCAO75347 108 aaKnown RBP8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 TADA3O75528 432 aa8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 F11P03951 625 aa8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 KRT18P05783 430 aaKnown RBP8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 ZNF806P0C7X5 589 aa8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 HMGA1P17096 107 aaKnown RBP8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 PLCG1P19174 1290 aa8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 PAX3P23760 479 aa8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 PMLP29590 882 aa8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 RAP1GAPP47736 663 aa8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 LIMK1P53667 647 aa8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 NLRP12P59046 1061 aa8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 GTF2BQ00403 316 aa8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 GRIN1Q05586 938 aa8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 GRSF1Q12849 480 aaKnown RBP eCLIP8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 BFSP1Q12934 665 aa8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 KARSQ15046 597 aaKnown RBP8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 PTPAQ15257 358 aa8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 N4BP2L1Q5TBK1 243 aaPredicted RBP8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 ARL6IP4Q66PJ3 421 aaKnown RBP8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 TXNDC8Q6A555 127 aa8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 ADALQ6DHV7 355 aa8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 CACNA2D4Q7Z3S7 1137 aa8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 THEM5Q8N1Q8 247 aa8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 C2orf15Q8WU43 125 aaKnown RBP8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 DDX1Q92499 740 aaKnown RBP8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 BAP1Q92560 729 aa8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 RAD54LQ92698 747 aa8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 CALML4Q96GE6 196 aa8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 HHIPQ96QV1 700 aa8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 PI4K2AQ9BTU6 479 aa8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 TGIF2Q9GZN2 237 aa8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 ASB7Q9H672 318 aa8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 FBRSL1Q9HCM7 1045 aaKnown RBP8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 METTL5Q9NRN9 209 aaKnown RBP8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 DPP3Q9NY33 737 aa8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 MAGED2Q9UNF1 606 aaPredicted RBP8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 C2CD2Q9Y426 696 aa8.39□□□□□ -1.07
SMCHD1-210ENST00000583800 TNRC6BQ9UPQ9 1833 aaKnown RBP8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 CCDC163A0A0D9SF12 145 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 KPNA7A9QM74 516 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 H3BQV1 296 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 TRDMT1O14717 391 aaKnown RBP8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 ATG13O75143 517 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 PRPF40AO75400 957 aaKnown RBP8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 TIMP2P16035 220 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 ACAT1P24752 427 aaKnown RBP8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 DDX6P26196 483 aaKnown RBP eCLIP8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 GJB2P29033 226 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 MPLP40238 635 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 UBA7P41226 1012 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 SMARCB1Q12824 385 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 CCDC142Q17RM4 750 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 SV2CQ496J9 727 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 STPG1Q5TH74 334 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 SCARA3Q6AZY7 606 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 TCEAL6Q6IPX3 200 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms