RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 CLUL1Q15846 466 aa11.22□□□□□ -0.61
CDK5RAP3-225ENST00000582482 GRIK4Q16099 956 aa11.22□□□□□ -0.61
CDK5RAP3-225ENST00000582482 BBS9Q3SYG4 887 aa11.22□□□□□ -0.61
CDK5RAP3-225ENST00000582482 TTC30AQ86WT1 665 aa11.22□□□□□ -0.61
CDK5RAP3-225ENST00000582482 ZCCHC9Q8N567 271 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-225ENST00000582482 CCDC89Q8N998 374 aa11.22□□□□□ -0.61
CDK5RAP3-225ENST00000582482 BRI3BPQ8WY22 251 aa11.22□□□□□ -0.61
CDK5RAP3-225ENST00000582482 CCT6BQ92526 530 aa11.22□□□□□ -0.61
CDK5RAP3-225ENST00000582482 PRCCQ92733 491 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-225ENST00000582482 SLC10A4Q96EP9 437 aa11.22□□□□□ -0.61
CDK5RAP3-225ENST00000582482 RBM41Q96IZ5 413 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-225ENST00000582482 VCPIP1Q96JH7 1222 aa11.22□□□□□ -0.61
CDK5RAP3-225ENST00000582482 SYT17Q9BSW7 474 aa11.22□□□□□ -0.61
CDK5RAP3-225ENST00000582482 CEP41Q9BYV8 373 aa11.22□□□□□ -0.61
CDK5RAP3-225ENST00000582482 DPP3Q9NY33 737 aa11.22□□□□□ -0.61
CDK5RAP3-225ENST00000582482 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.22□□□□□ -0.61
CDK5RAP3-225ENST00000582482 CHMP2BQ9UQN3 213 aa11.22□□□□□ -0.61
CDK5RAP3-225ENST00000582482 MYO18AQ92614 2054 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-225ENST00000582482 MEIS3P2A8K0S8 358 aa11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 A8MUI8 341 aa11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 CXCL11O14625 94 aa11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 EIF4BP23588 611 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 RPA3P35244 121 aaPredicted RBP11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 CDH6P55285 790 aa11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 YWHAEP62258 255 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 PITX1P78337 314 aaPredicted RBP11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 DNAJC3Q13217 504 aa11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 SLC1A5Q15758 541 aa11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 PPP6R3Q5H9R7 873 aaPredicted RBP11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 PTPN18Q99952 460 aa11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 MAK16Q9BXY0 300 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 KATNBL1Q9H079 304 aa11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 SLC40A1Q9NP59 571 aa11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 TPX2Q9ULW0 747 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 USP18Q9UMW8 372 aa11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 CEP83Q9Y592 693 aa11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 CCL15-CCL14A0A0B4J2E2 113 aa11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 SIGLEC16A6NMB1 481 aa11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 DYNC1LI2O43237 492 aaPredicted RBP11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 PDGFRAP16234 1089 aa11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 AFF1P51825 1210 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 MYO1EQ12965 1108 aa11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 CCL14Q16627 93 aa11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 CCL15Q16663 113 aa11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 ZNF792Q3KQV3 632 aa11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 MFSD5Q6N075 450 aa11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 PYROXD2Q8N2H3 581 aa11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 ANKLE1Q8NAG6 615 aa11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 GPRC5AQ8NFJ5 357 aa11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 SLC35B2Q8TB61 432 aa11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 TGS1Q96RS0 853 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 C2orf40Q9H1Z8 148 aa11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 CNOT10Q9H9A5 744 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 FLRT1Q9NZU1 646 aa11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 SLC17A6Q9P2U8 582 aa11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 CPA4Q9UI42 421 aa11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 PCDHGC3Q9UN70 934 aa11.21□□□□□ -0.61
CDK5RAP3-225ENST00000582482 SPTLC1O15269 473 aa11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 UBOX5O94941 541 aa11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 LSM8O95777 96 aaKnown RBP11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 TRUB2O95900 331 aaKnown RBP11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 KRT15P19012 456 aa11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 HOXA11P31270 313 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 GMPRP36959 345 aa11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 EIF3EP60228 445 aaKnown RBP11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 PIGHQ14442 188 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 DPP9Q86TI2 863 aa11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 CCDC197Q8NCU1 140 aa11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 SPATA18Q8TC71 538 aa11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 RUNDC3BQ96NL0 473 aa11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 PLXNB2O15031 1838 aa11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 C2orf71A6NGG8 1288 aa11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 CLDN5O00501 218 aa11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 UGT1A9O60656 530 aa11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 TOP3BO95985 862 aaKnown RBP11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 HMGCRP04035 888 aa11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 LCP1P13796 627 aa11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 ACAT1P24752 427 aaKnown RBP11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 CDH5P33151 784 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 MAN1A1P33908 653 aa11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 KCNJ2P63252 427 aa11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 SPDYCQ5MJ68 293 aa11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 TP53INP2Q8IXH6 220 aa11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 LINC01465Q8N7H1 131 aa11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 FBXO36Q8NEA4 188 aa11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 OR6J1Q8NGC5 347 aa11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 MAML1Q92585 1016 aa11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 UGT1A7Q9HAW7 530 aa11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 UGT1A10Q9HAW8 530 aa11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 UGT1A8Q9HAW9 530 aa11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 UBN1Q9NPG3 1134 aa11.2□□□□□ -0.62
CDK5RAP3-225ENST00000582482 RBP3P10745 1247 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 STX2P32856 288 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 GRIA1P42261 906 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 SOX4Q06945 474 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 OVGP1Q12889 678 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 SNAPC2Q13487 334 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 OLIG2Q13516 323 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms