RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 SEMA3AQ14563 771 aa7.73□□□□□ -1.17
CMTM4-205ENST00000581487 DNAL1Q4LDG9 190 aa7.73□□□□□ -1.17
CMTM4-205ENST00000581487 ZCCHC7Q8N3Z6 543 aaKnown RBP7.73□□□□□ -1.17
CMTM4-205ENST00000581487 KCTD6Q8NC69 237 aa7.73□□□□□ -1.17
CMTM4-205ENST00000581487 KLHL1Q9NR64 748 aa7.73□□□□□ -1.17
CMTM4-205ENST00000581487 N6AMT1Q9Y5N5 214 aa7.73□□□□□ -1.17
CMTM4-205ENST00000581487 AK9Q5TCS8 1911 aa7.73□□□□□ -1.17
CMTM4-205ENST00000581487 AKAP10O43572 662 aa7.73□□□□□ -1.17
CMTM4-205ENST00000581487 TRIM3O75382 744 aaPredicted RBP7.73□□□□□ -1.17
CMTM4-205ENST00000581487 GSTT1P30711 240 aa7.73□□□□□ -1.17
CMTM4-205ENST00000581487 VAMP7P51809 220 aa7.73□□□□□ -1.17
CMTM4-205ENST00000581487 LONRF1Q17RB8 773 aa7.73□□□□□ -1.17
CMTM4-205ENST00000581487 NT5DC1Q5TFE4 455 aa7.73□□□□□ -1.17
CMTM4-205ENST00000581487 TTI2Q6NXR4 508 aa7.73□□□□□ -1.17
CMTM4-205ENST00000581487 RNF19BQ6ZMZ0 732 aa7.73□□□□□ -1.17
CMTM4-205ENST00000581487 FAM196AQ6ZSG2 479 aa7.73□□□□□ -1.17
CMTM4-205ENST00000581487 CROCCP3Q8IVE0 287 aa7.73□□□□□ -1.17
CMTM4-205ENST00000581487 FSTL5Q8N475 847 aaPredicted RBP7.73□□□□□ -1.17
CMTM4-205ENST00000581487 BTBD6Q96KE9 485 aa7.73□□□□□ -1.17
CMTM4-205ENST00000581487 ANKRD27Q96NW4 1050 aa7.73□□□□□ -1.17
CMTM4-205ENST00000581487 TSSK1BQ9BXA7 367 aa7.73□□□□□ -1.17
CMTM4-205ENST00000581487 ZWILCHQ9H900 591 aa7.73□□□□□ -1.17
CMTM4-205ENST00000581487 MOCS1Q9NZB8 636 aa7.73□□□□□ -1.17
CMTM4-205ENST00000581487 POLR1DQ9Y2S0 133 aa7.73□□□□□ -1.17
CMTM4-205ENST00000581487 AP4S1Q9Y587 144 aa7.73□□□□□ -1.17
CMTM4-205ENST00000581487 SLC16A4O15374 487 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 EYA4O95677 639 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 DRG2P55039 364 aaKnown RBP7.72□□□□□ -1.17
CMTM4-205ENST00000581487 TMEM63BQ5T3F8 832 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 OR6B2Q6IFH4 312 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 PCGF5Q86SE9 256 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 DNAAF3Q8N9W5 541 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 PMM1Q92871 262 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 ITFG2Q969R8 447 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 ALG13Q9NP73 1137 aaKnown RBP7.72□□□□□ -1.17
CMTM4-205ENST00000581487 ATF5Q9Y2D1 282 aaPredicted RBP7.72□□□□□ -1.17
CMTM4-205ENST00000581487 BTBD3Q9Y2F9 522 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 KLHL20Q9Y2M5 609 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 MAP3K13O43283 966 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 EIF2AK2P19525 551 aaKnown RBP7.72□□□□□ -1.17
CMTM4-205ENST00000581487 CLK1P49759 484 aaKnown RBP7.72□□□□□ -1.17
CMTM4-205ENST00000581487 PDIA2Q13087 525 aaKnown RBP7.72□□□□□ -1.17
CMTM4-205ENST00000581487 MAMLD1Q13495 774 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 STAT4Q14765 748 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 KLHDC7AQ5VTJ3 777 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 ERAP2Q6P179 960 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 OR8H2Q8N162 312 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 DHX38Q92620 1227 aaKnown RBP7.72□□□□□ -1.17
CMTM4-205ENST00000581487 TRIT1Q9H3H1 467 aaKnown RBP7.72□□□□□ -1.17
CMTM4-205ENST00000581487 AKAP7Q9P0M2 348 aaPredicted RBP7.72□□□□□ -1.17
CMTM4-205ENST00000581487 EMSYQ7Z589 1322 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 C1orf232A0A0U1RR37 186 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 CCT3P49368 545 aaKnown RBP7.72□□□□□ -1.17
CMTM4-205ENST00000581487 CACNB3P54284 484 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 PKN1Q16512 942 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 TTC33Q6PID6 262 aaPredicted RBP7.72□□□□□ -1.17
CMTM4-205ENST00000581487 ERICH1Q86X53 443 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 CDKL3Q8IVW4 592 aaPredicted RBP7.72□□□□□ -1.17
CMTM4-205ENST00000581487 ZNF786Q8N393 782 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 TERB1Q8NA31 727 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 FAM45AQ8TCE6 357 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 PDCD6IPQ8WUM4 868 aaKnown RBP7.72□□□□□ -1.17
CMTM4-205ENST00000581487 INPP5DQ92835 1189 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 STK33Q9BYT3 514 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 AS3MTQ9HBK9 375 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 CYLDQ9NQC7 956 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 NXF1Q9UBU9 619 aaKnown RBP7.72□□□□□ -1.17
CMTM4-205ENST00000581487 RBMX2Q9Y388 322 aaKnown RBP7.72□□□□□ -1.17
CMTM4-205ENST00000581487 COL15A1P39059 1388 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 TMEM120BA0PK00 339 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 HPGDP15428 266 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 PPP3CCP48454 512 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 TFAMQ00059 246 aaKnown RBP7.72□□□□□ -1.17
CMTM4-205ENST00000581487 SCRN3Q0VDG4 424 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 MAPK11Q15759 364 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 DAGLBQ8NCG7 672 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 RNF139Q8WU17 664 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 HIST1H2AHQ96KK5 128 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 TRAPPC9Q96Q05 1148 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 HIST1H2AJQ99878 128 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 DDX50Q9BQ39 737 aaKnown RBP7.72□□□□□ -1.17
CMTM4-205ENST00000581487 COA1Q9GZY4 146 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 RABGEF1Q9UJ41 708 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 FBXO9Q9UK97 447 aaPredicted RBP7.72□□□□□ -1.17
CMTM4-205ENST00000581487 FAM32AQ9Y421 112 aaKnown RBP7.72□□□□□ -1.17
CMTM4-205ENST00000581487 CD163L1Q9NR16 1453 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 ABCA9Q8IUA7 1624 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 SAGE2PA6NJ88 616 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 FAM196BA6NMK8 535 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 E5RI56 91 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 RPS6KA4O75676 772 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 ENO2P09104 434 aaPredicted RBP7.72□□□□□ -1.17
CMTM4-205ENST00000581487 CBX3Q13185 183 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 TNFAIP1Q13829 316 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 FAM45BPQ6NSW5 357 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 EZH1Q92800 747 aaPredicted RBP7.72□□□□□ -1.17
CMTM4-205ENST00000581487 IFT43Q96FT9 208 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 PPP1R36Q96LQ0 422 aa7.72□□□□□ -1.17
CMTM4-205ENST00000581487 QKIQ96PU8 341 aaKnown RBP eCLIP7.72□□□□□ -1.17
CMTM4-205ENST00000581487 CARD8Q9Y2G2 431 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms