RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 GIPC1O14908 333 aa10.54□□□□□ -0.72
TRAPPC1-205ENST00000572656 TRIM66O15016 1216 aa10.54□□□□□ -0.72
TRAPPC1-205ENST00000572656 ALDH1A2O94788 518 aa10.54□□□□□ -0.72
TRAPPC1-205ENST00000572656 PRPF6O94906 941 aaKnown RBP10.54□□□□□ -0.72
TRAPPC1-205ENST00000572656 TNNC2P02585 160 aa10.54□□□□□ -0.72
TRAPPC1-205ENST00000572656 CYP17A1P05093 508 aa10.54□□□□□ -0.72
TRAPPC1-205ENST00000572656 PDGFRBP09619 1106 aa10.54□□□□□ -0.72
TRAPPC1-205ENST00000572656 WARSP23381 471 aaKnown RBP10.54□□□□□ -0.72
TRAPPC1-205ENST00000572656 ANXA13P27216 316 aa10.54□□□□□ -0.72
TRAPPC1-205ENST00000572656 PPP3CCP48454 512 aa10.54□□□□□ -0.72
TRAPPC1-205ENST00000572656 USP46P62068 366 aa10.54□□□□□ -0.72
TRAPPC1-205ENST00000572656 NOP14P78316 857 aaKnown RBP10.54□□□□□ -0.72
TRAPPC1-205ENST00000572656 MRPS21P82921 87 aaKnown RBP10.54□□□□□ -0.72
TRAPPC1-205ENST00000572656 CYP27A1Q02318 531 aa10.54□□□□□ -0.72
TRAPPC1-205ENST00000572656 SURF1Q15526 300 aa10.54□□□□□ -0.72
TRAPPC1-205ENST00000572656 CRY1Q16526 586 aa10.54□□□□□ -0.72
TRAPPC1-205ENST00000572656 GAB4Q2WGN9 574 aa10.54□□□□□ -0.72
TRAPPC1-205ENST00000572656 LMBRD2Q68DH5 695 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC1-205ENST00000572656 CYP2U1Q7Z449 544 aa10.54□□□□□ -0.72
TRAPPC1-205ENST00000572656 FILIP1Q7Z7B0 1213 aa10.54□□□□□ -0.72
TRAPPC1-205ENST00000572656 CCDC33Q8N5R6 958 aa10.54□□□□□ -0.72
TRAPPC1-205ENST00000572656 OR5B17Q8NGF7 314 aa10.54□□□□□ -0.72
TRAPPC1-205ENST00000572656 MYCBPAPQ8TBZ2 947 aa10.54□□□□□ -0.72
TRAPPC1-205ENST00000572656 TTLL2Q9BWV7 592 aa10.54□□□□□ -0.72
TRAPPC1-205ENST00000572656 RNF38Q9H0F5 515 aa10.54□□□□□ -0.72
TRAPPC1-205ENST00000572656 TMEM9BQ9NQ34 198 aa10.54□□□□□ -0.72
TRAPPC1-205ENST00000572656 CHD6Q8TD26 2715 aa10.54□□□□□ -0.72
TRAPPC1-205ENST00000572656 PTPRJQ12913 1337 aa10.54□□□□□ -0.72
TRAPPC1-205ENST00000572656 CEP295Q9C0D2 2601 aa10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 A0A0A0MRY4 1105 aa10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 ANTXRLA6NF34 631 aa10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 CDX4O14627 284 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 SLC9A3R1O14745 358 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 OLFM2O95897 454 aa10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 FAM163BP0C2L3 166 aa10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 CEACAM1P13688 526 aa10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 PDCP20941 246 aa10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 CSRP1P21291 193 aaKnown RBP10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 BCKDHBP21953 392 aa10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 STAT6P42226 847 aa10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 ZNF252P-AS1Q0IIN9 211 aa10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 DHCR24Q15392 516 aa10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 HSF5Q4G112 596 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 SH3PXD2AQ5TCZ1 1133 aa10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 STXBP4Q6ZWJ1 553 aa10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 CBWD2Q8IUF1 395 aa10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 CCDC65Q8IXS2 484 aa10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 MDGA1Q8NFP4 955 aa10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 OLIG1Q8TAK6 271 aa10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 PCED1BQ96HM7 432 aa10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 C8orf48Q96LL4 319 aa10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 PNKPQ96T60 521 aa10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 MMS19Q96T76 1030 aa10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 PANK2Q9BZ23 570 aa10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 UPF2Q9HAU5 1272 aaKnown RBP10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 KIAA1586Q9HCI6 787 aa10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 WASF3Q9UPY6 502 aa10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 CPQQ9Y646 472 aa10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 MORC2Q9Y6X9 1032 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 MAP1BP46821 2468 aaKnown RBP10.53□□□□□ -0.72
TRAPPC1-205ENST00000572656 MYH11P35749 1972 aa10.52□□□□□ -0.72
TRAPPC1-205ENST00000572656 SCN1AP35498 2009 aa10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 A0A087X0B3 334 aa10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 PATE3B3GLJ2 98 aa10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 F8VP50 259 aa10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 TACC1O75410 805 aa10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 KAT7O95251 611 aa10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 OAS1P00973 400 aaKnown RBP10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 CHRM1P11229 460 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 HNRNPLP14866 589 aaKnown RBP eCLIP10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 GNL1P36915 607 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 EIF2DP41214 584 aaKnown RBP10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 SLC6A11P48066 632 aa10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 DHPSP49366 369 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 IRX4P78413 519 aa10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 LMAN2Q12907 356 aa10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 TAF10Q12962 218 aa10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 MDH1BQ5I0G3 518 aa10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 TDRD10Q5VZ19 366 aaKnown RBP10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 RHBDF2Q6PJF5 856 aa10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 UNQ6494/PRO21346Q6UXR6 183 aa10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 TMEM92Q6UXU6 159 aa10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 LPCAT2Q7L5N7 544 aa10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 TRAPPC11Q7Z392 1133 aa10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 TTC30AQ86WT1 665 aa10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 DDX42Q86XP3 938 aaKnown RBP eCLIP10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 WDR49Q8IV35 697 aa10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 ALLCQ8N6M5 410 aa10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 IL17RCQ8NAC3 791 aa10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 TXNDC5Q8NBS9 432 aaKnown RBP10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 WHAMMQ8TF30 809 aa10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 PIGKQ92643 395 aa10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 MRPL45Q9BRJ2 306 aaKnown RBP10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 SNX25Q9H3E2 840 aa10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 SMPD4Q9NXE4 827 aa10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 HSPBP1Q9NZL4 362 aa10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 CFAP97Q9P2B7 532 aa10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 EVLQ9UI08 416 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC1-205ENST00000572656 CFAP47Q6ZTR5 3102 aa10.51□□□□□ -0.73
TRAPPC1-205ENST00000572656 C1QTNF9BB2RNN3 333 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms