RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 ZNF197O14709 1029 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 COBLO75128 1261 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 VDRP11473 427 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 ALOX15P16050 662 aaPredicted RBP7.36□□□□□ -1.23
CNOT1-216ENST00000569240 ZNF23P17027 643 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 SFNP31947 248 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 ANXA11P50995 505 aaKnown RBP7.36□□□□□ -1.23
CNOT1-216ENST00000569240 AQP5P55064 265 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 TRAF2Q12933 501 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 PTPROQ16827 1216 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 TJAP1Q5JTD0 557 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 TMTC4Q5T4D3 741 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 ELMSAN1Q6PJG2 1045 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 C11orf74Q86VG3 221 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 DENND6AQ8IWF6 608 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 SCFD2Q8WU76 684 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 C1orf54Q8WWF1 131 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 IRGQQ8WZA9 623 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 ZNF75CPQ92670 426 aaPredicted RBP7.36□□□□□ -1.23
CNOT1-216ENST00000569240 MS4A14Q96JA4 679 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 TSPAN18Q96SJ8 248 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 GRIP2Q9C0E4 1043 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 JMJD4Q9H9V9 463 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 ARHGEF3Q9NR81 526 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 BARHL2Q9NY43 387 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 MAD2L2Q9UI95 211 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 GGT7Q9UJ14 662 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 CROTQ9UKG9 612 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 VAV3Q9UKW4 847 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 RNF103O00237 685 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 ATF6P18850 670 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 AKAP5P24588 427 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 ERP29P30040 261 aaKnown RBP7.36□□□□□ -1.23
CNOT1-216ENST00000569240 FAM83EQ2M2I3 478 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 BOLA3Q53S33 107 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.36□□□□□ -1.23
CNOT1-216ENST00000569240 PLEKHG4BQ96PX9 1271 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 RMND5AQ9H871 391 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 AKAP7Q9P0M2 348 aaPredicted RBP7.36□□□□□ -1.23
CNOT1-216ENST00000569240 PFDN2Q9UHV9 154 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 XPO7Q9UIA9 1087 aaKnown RBP7.36□□□□□ -1.23
CNOT1-216ENST00000569240 GGA1Q9UJY5 639 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 TMEM114B3SHH9 223 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 FKBP9O95302 570 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 SUZ12Q15022 739 aaKnown RBP7.36□□□□□ -1.23
CNOT1-216ENST00000569240 DEFB107AQ8IZN7 70 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 EPS8L3Q8TE67 593 aaKnown RBP7.36□□□□□ -1.23
CNOT1-216ENST00000569240 TCF7L2Q9NQB0 619 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 AGPAT5Q9NUQ2 364 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 C3orf18Q9UK00 162 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 SLC12A4Q9UP95 1085 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 NRXN1Q9ULB1 1477 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 A0A087WWV3 80 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 M0R2C6 588 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 FMO5P49326 533 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 USP46P62068 366 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 ERVK-9P63128 1117 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 TNK2Q07912 1038 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 FASTKD1Q53R41 847 aaKnown RBP7.36□□□□□ -1.23
CNOT1-216ENST00000569240 ZNF667Q5HYK9 610 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 RRM2BQ7LG56 351 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 EID3Q8N140 333 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 FAM167AQ96KS9 214 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 TLR10Q9BXR5 811 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 AGXT2Q9BYV1 514 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 DHX36Q9H2U1 1008 aaKnown RBP7.36□□□□□ -1.23
CNOT1-216ENST00000569240 GOLPH3Q9H4A6 298 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 CD320Q9NPF0 282 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 TBC1D22BQ9NU19 505 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 SLC26A3P40879 764 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 FXR2P51116 673 aaKnown RBP eCLIP7.36□□□□□ -1.231e-7■■■■□ 21
CNOT1-216ENST00000569240 MAD2L1Q13257 205 aaPredicted RBP7.36□□□□□ -1.23
CNOT1-216ENST00000569240 TRIM25Q14258 630 aaKnown RBP7.36□□□□□ -1.23
CNOT1-216ENST00000569240 PTPAQ15257 358 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 TBCELQ5QJ74 424 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 OR6B2Q6IFH4 312 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 FAM160B2Q86V87 743 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 OR8H2Q8N162 312 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 PPHLN1Q8NEY8 458 aaKnown RBP7.36□□□□□ -1.23
CNOT1-216ENST00000569240 DCAF4Q8WV16 495 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 TCF12Q99081 682 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 ACAD9Q9H845 621 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 ZNF180Q9UJW8 692 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 TBX22Q9Y458 520 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 TNRQ92752 1358 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 IRGMA1A4Y4 181 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 PLK4O00444 970 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 TRIM38O00635 465 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 GNPATO15228 680 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 IL2RBP14784 551 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 COMTP21964 271 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 GPD2P43304 727 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 EMC10Q5UCC4 262 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 C4orf50Q6ZRC1 276 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 MYDGFQ969H8 173 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 FAM162AQ96A26 154 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 RMDN3Q96TC7 470 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 KANSL2Q9H9L4 492 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 BAIAP2Q9UQB8 552 aa7.36□□□□□ -1.23
CNOT1-216ENST00000569240 CCDC195A0A1B0GUA6 201 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms