RNA–Protein interactions for RNA: ENST00000568653.7

RPGRIP1L-210, Transcript of RPGRIP1 like, humanhuman

TSL 1 (best) BASIC

Gene RPGRIP1L, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1L-210ENST00000568653 FBXL18Q96ME1 805 aa9.42□□□□□ -0.9
RPGRIP1L-210ENST00000568653 TOX2Q96NM4 488 aa9.42□□□□□ -0.9
RPGRIP1L-210ENST00000568653 CALN1Q9BXU9 219 aa9.42□□□□□ -0.9
RPGRIP1L-210ENST00000568653 PPP1R12CQ9BZL4 782 aa9.42□□□□□ -0.9
RPGRIP1L-210ENST00000568653 FOXP3Q9BZS1 431 aa9.42□□□□□ -0.9
RPGRIP1L-210ENST00000568653 BCAS3Q9H6U6 928 aa9.42□□□□□ -0.9
RPGRIP1L-210ENST00000568653 FARSBQ9NSD9 589 aaKnown RBP9.42□□□□□ -0.9
RPGRIP1L-210ENST00000568653 GMIPQ9P107 970 aa9.42□□□□□ -0.9
RPGRIP1L-210ENST00000568653 IGSF9BQ9UPX0 1349 aa9.42□□□□□ -0.9
RPGRIP1L-210ENST00000568653 CYP1A1P04798 512 aaPredicted RBP9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 PSAPP07602 524 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 NR1D1P20393 614 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 M6PRP20645 277 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 IFNA8P32881 189 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 CSTF2P33240 577 aaKnown RBP eCLIP9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 TXKP42681 527 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 RTP1P59025 263 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 RUNX1T1Q06455 604 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 NNTQ13423 1086 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 KPNB1Q14974 876 aaKnown RBP9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 LRRC26Q2I0M4 334 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 WDR44Q5JSH3 913 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 KLHL35Q6PF15 583 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 ARFGAP2Q8N6H7 521 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 CFAP61Q8NHU2 1237 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 MDM1Q8TC05 714 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 UCMAQ8WVF2 138 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 GAB3Q8WWW8 586 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 GATA6Q92908 595 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 NXPE3Q969Y0 559 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 FANCEQ9HB96 536 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 GID8Q9NWU2 228 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 VANGL2Q9ULK5 521 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 COL1A2P08123 1366 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 PRSS47A8MTI9 375 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 HDAC3O15379 428 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 TLR3O15455 904 aaKnown RBP9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 TRAPPC3O43617 180 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 GUCY1B2O75343 617 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 KATNA1O75449 491 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 OR52Z1P0C646 297 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 ZNF286BP0CG31 522 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 CALB2P22676 271 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 HOXC8P31273 242 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 GNL1P36915 607 aaPredicted RBP9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 GSTA3Q16772 222 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 ZNF423Q2M1K9 1284 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 ARMC4Q5T2S8 1044 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 CCNI2Q6ZMN8 369 aaPredicted RBP9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 TMTC1Q8IUR5 882 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 ZBED8Q8IZ13 594 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 NUP93Q8N1F7 819 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 RBBP8NLQ8NC74 664 aaPredicted RBP9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 AENQ8WTP8 325 aaKnown RBP9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 FERMT2Q96AC1 680 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 MOGAT1Q96PD6 335 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 PCYT2Q99447 389 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 ERAP1Q9NZ08 941 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 PCDHA10Q9Y5I2 948 aa9.41□□□□□ -0.9
RPGRIP1L-210ENST00000568653 KIAA0100Q14667 2235 aaKnown RBP9.4□□□□□ -0.9
RPGRIP1L-210ENST00000568653 TRAV6A0A075B6T7 132 aa9.4□□□□□ -0.9
RPGRIP1L-210ENST00000568653 DDX39AO00148 427 aaKnown RBP9.4□□□□□ -0.9
RPGRIP1L-210ENST00000568653 EXTL3O43909 919 aa9.4□□□□□ -0.9
RPGRIP1L-210ENST00000568653 SORBS3O60504 671 aa9.4□□□□□ -0.9
RPGRIP1L-210ENST00000568653 OR5F1O95221 314 aa9.4□□□□□ -0.9
RPGRIP1L-210ENST00000568653 PABPC4LP0CB38 370 aaKnown RBP9.4□□□□□ -0.9
RPGRIP1L-210ENST00000568653 HOXB1P14653 301 aaPredicted RBP9.4□□□□□ -0.9
RPGRIP1L-210ENST00000568653 IDEP14735 1019 aa9.4□□□□□ -0.9
RPGRIP1L-210ENST00000568653 MCM7P33993 719 aa9.4□□□□□ -0.9
RPGRIP1L-210ENST00000568653 MARSP56192 900 aaKnown RBP9.4□□□□□ -0.9
RPGRIP1L-210ENST00000568653 PFKPQ01813 784 aa9.4□□□□□ -0.9
RPGRIP1L-210ENST00000568653 SPIRE1Q08AE8 756 aa9.4□□□□□ -0.9
RPGRIP1L-210ENST00000568653 GALNT1Q10472 559 aaPredicted RBP9.4□□□□□ -0.9
RPGRIP1L-210ENST00000568653 MIER3Q7Z3K6 550 aa9.4□□□□□ -0.9
RPGRIP1L-210ENST00000568653 NOP9Q86U38 636 aaKnown RBP9.4□□□□□ -0.9
RPGRIP1L-210ENST00000568653 DDX42Q86XP3 938 aaKnown RBP eCLIP9.4□□□□□ -0.9
RPGRIP1L-210ENST00000568653 GPIHBP1Q8IV16 184 aa9.4□□□□□ -0.9
RPGRIP1L-210ENST00000568653 C4orf32Q8N8J7 132 aa9.4□□□□□ -0.9
RPGRIP1L-210ENST00000568653 ANKRD53Q8N9V6 530 aa9.4□□□□□ -0.9
RPGRIP1L-210ENST00000568653 PTCD2Q8WV60 388 aaKnown RBP9.4□□□□□ -0.9
RPGRIP1L-210ENST00000568653 PRCCQ92733 491 aaPredicted RBP9.4□□□□□ -0.9
RPGRIP1L-210ENST00000568653 SPACA7Q96KW9 195 aa9.4□□□□□ -0.9
RPGRIP1L-210ENST00000568653 IFT74Q96LB3 600 aa9.4□□□□□ -0.9
RPGRIP1L-210ENST00000568653 AZI2Q9H6S1 392 aa9.4□□□□□ -0.9
RPGRIP1L-210ENST00000568653 CTAGE9A4FU28 777 aa9.4□□□□□ -0.91
RPGRIP1L-210ENST00000568653 H3BRB1 525 aa9.4□□□□□ -0.91
RPGRIP1L-210ENST00000568653 DKC1O60832 514 aaKnown RBP eCLIP9.4□□□□□ -0.91
RPGRIP1L-210ENST00000568653 HSF2BPO75031 334 aa9.4□□□□□ -0.91
RPGRIP1L-210ENST00000568653 CD4P01730 458 aa9.4□□□□□ -0.91
RPGRIP1L-210ENST00000568653 PHBP35232 272 aa9.4□□□□□ -0.91
RPGRIP1L-210ENST00000568653 CCR3P51677 355 aa9.4□□□□□ -0.91
RPGRIP1L-210ENST00000568653 PSMC6P62333 389 aa9.4□□□□□ -0.91
RPGRIP1L-210ENST00000568653 ATP2C1P98194 919 aaPredicted RBP9.4□□□□□ -0.91
RPGRIP1L-210ENST00000568653 SP4Q02446 784 aa9.4□□□□□ -0.91
RPGRIP1L-210ENST00000568653 CDK18Q07002 472 aa9.4□□□□□ -0.91
RPGRIP1L-210ENST00000568653 TRAP1Q12931 704 aaKnown RBP9.4□□□□□ -0.91
RPGRIP1L-210ENST00000568653 ITGA9Q13797 1035 aa9.4□□□□□ -0.91
RPGRIP1L-210ENST00000568653 MAPRE2Q15555 327 aa9.4□□□□□ -0.91
RPGRIP1L-210ENST00000568653 KRT71Q3SY84 523 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms