RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 TWNKQ96RR1 684 aa19.17■□□□□ 0.66
PKD1-235ENST00000568591 TRIM56Q9BRZ2 755 aaKnown RBP19.17■□□□□ 0.66
PKD1-235ENST00000568591 TSSK1BQ9BXA7 367 aa19.17■□□□□ 0.66
PKD1-235ENST00000568591 LRRC42Q9Y546 428 aa19.17■□□□□ 0.66
PKD1-235ENST00000568591 RBP3P10745 1247 aa19.17■□□□□ 0.66
PKD1-235ENST00000568591 EIF4BP23588 611 aaKnown RBP19.17■□□□□ 0.66
PKD1-235ENST00000568591 PTK7Q13308 1070 aa19.17■□□□□ 0.66
PKD1-235ENST00000568591 CAPRIN2Q6IMN6 1127 aaKnown RBP19.17■□□□□ 0.66
PKD1-235ENST00000568591 C4orf50Q6ZRC1 276 aa19.17■□□□□ 0.66
PKD1-235ENST00000568591 EEPD1Q7L9B9 569 aa19.17■□□□□ 0.66
PKD1-235ENST00000568591 KCTD6Q8NC69 237 aa19.17■□□□□ 0.66
PKD1-235ENST00000568591 PEBP4Q96S96 227 aa19.17■□□□□ 0.66
PKD1-235ENST00000568591 MECRQ9BV79 373 aa19.17■□□□□ 0.66
PKD1-235ENST00000568591 TMEM120AQ9BXJ8 343 aa19.17■□□□□ 0.66
PKD1-235ENST00000568591 OSBPL1AQ9BXW6 950 aa19.17■□□□□ 0.66
PKD1-235ENST00000568591 ASCC2Q9H1I8 757 aaPredicted RBP19.17■□□□□ 0.66
PKD1-235ENST00000568591 ZNF395Q9H8N7 513 aaPredicted RBP19.17■□□□□ 0.66
PKD1-235ENST00000568591 AFG3L2Q9Y4W6 797 aa19.17■□□□□ 0.66
PKD1-235ENST00000568591 CCDC189A1A4V9 331 aa19.16■□□□□ 0.66
PKD1-235ENST00000568591 HOXC6P09630 235 aa19.16■□□□□ 0.66
PKD1-235ENST00000568591 TROVE2P10155 538 aaKnown RBP eCLIP19.16■□□□□ 0.66
PKD1-235ENST00000568591 MIPP30301 263 aa19.16■□□□□ 0.66
PKD1-235ENST00000568591 CPA2P48052 419 aa19.16■□□□□ 0.66
PKD1-235ENST00000568591 TRPC3Q13507 836 aa19.16■□□□□ 0.66
PKD1-235ENST00000568591 FAXCQ5TGI0 409 aa19.16■□□□□ 0.66
PKD1-235ENST00000568591 RINLQ6ZS11 566 aa19.16■□□□□ 0.66
PKD1-235ENST00000568591 POLNQ7Z5Q5 900 aa19.16■□□□□ 0.66
PKD1-235ENST00000568591 TRIM50Q86XT4 487 aa19.16■□□□□ 0.66
PKD1-235ENST00000568591 PDIK1LQ8N165 341 aa19.16■□□□□ 0.66
PKD1-235ENST00000568591 SPATA18Q8TC71 538 aa19.16■□□□□ 0.66
PKD1-235ENST00000568591 PTCD3Q96EY7 689 aaKnown RBP19.16■□□□□ 0.66
PKD1-235ENST00000568591 RLFQ13129 1914 aa19.16■□□□□ 0.66
PKD1-235ENST00000568591 PARP14Q460N5 1801 aa19.16■□□□□ 0.66
PKD1-235ENST00000568591 FAM237BA0A1B0GVD1 139 aa19.16■□□□□ 0.66
PKD1-235ENST00000568591 MAP3K13O43283 966 aa19.16■□□□□ 0.66
PKD1-235ENST00000568591 B4GALT5O43286 388 aa19.16■□□□□ 0.66
PKD1-235ENST00000568591 MT-ND3P03897 115 aa19.16■□□□□ 0.66
PKD1-235ENST00000568591 KRT19P08727 400 aa19.16■□□□□ 0.66
PKD1-235ENST00000568591 CDH5P33151 784 aaPredicted RBP19.16■□□□□ 0.66
PKD1-235ENST00000568591 ETV4P43268 484 aa19.16■□□□□ 0.66
PKD1-235ENST00000568591 DPYSL3Q14195 570 aa19.16■□□□□ 0.66
PKD1-235ENST00000568591 RFX8Q6ZV50 586 aa19.16■□□□□ 0.66
PKD1-235ENST00000568591 DPH6Q7L8W6 267 aa19.16■□□□□ 0.66
PKD1-235ENST00000568591 ENDOVQ8N8Q3 282 aaKnown RBP19.16■□□□□ 0.66
PKD1-235ENST00000568591 SDCBP2Q9H190 292 aa19.16■□□□□ 0.66
PKD1-235ENST00000568591 PCDHGC3Q9UN70 934 aa19.16■□□□□ 0.66
PKD1-235ENST00000568591 SIGLEC16A6NMB1 481 aa19.15■□□□□ 0.66
PKD1-235ENST00000568591 KRT36O76013 467 aa19.15■□□□□ 0.66
PKD1-235ENST00000568591 HAUS5O94927 633 aa19.15■□□□□ 0.66
PKD1-235ENST00000568591 LINGO3P0C6S8 592 aa19.15■□□□□ 0.66
PKD1-235ENST00000568591 UBA1P22314 1058 aaKnown RBP19.15■□□□□ 0.66
PKD1-235ENST00000568591 YWHAGP61981 247 aaKnown RBP eCLIP19.15■□□□□ 0.66
PKD1-235ENST00000568591 DUOXA2Q1HG44 320 aa19.15■□□□□ 0.66
PKD1-235ENST00000568591 KLHL38Q2WGJ6 581 aa19.15■□□□□ 0.66
PKD1-235ENST00000568591 CES4AQ5XG92 561 aa19.15■□□□□ 0.66
PKD1-235ENST00000568591 PCGF5Q86SE9 256 aa19.15■□□□□ 0.66
PKD1-235ENST00000568591 ZNF280CQ8ND82 737 aa19.15■□□□□ 0.66
PKD1-235ENST00000568591 WDR60Q8WVS4 1066 aa19.15■□□□□ 0.66
PKD1-235ENST00000568591 PIWIL1Q96J94 861 aaKnown RBP19.15■□□□□ 0.66
PKD1-235ENST00000568591 CDHR1Q96JP9 859 aa19.15■□□□□ 0.66
PKD1-235ENST00000568591 TRIM55Q9BYV6 548 aa19.15■□□□□ 0.66
PKD1-235ENST00000568591 TLE6Q9H808 572 aa19.15■□□□□ 0.66
PKD1-235ENST00000568591 ACAD9Q9H845 621 aa19.15■□□□□ 0.66
PKD1-235ENST00000568591 SSU72Q9NP77 194 aaKnown RBP19.15■□□□□ 0.66
PKD1-235ENST00000568591 ABLIM1O14639 778 aa19.15■□□□□ 0.66
PKD1-235ENST00000568591 PTPRAP18433 802 aa19.15■□□□□ 0.66
PKD1-235ENST00000568591 PCK1P35558 622 aa19.15■□□□□ 0.66
PKD1-235ENST00000568591 ARFIP2P53365 341 aa19.15■□□□□ 0.66
PKD1-235ENST00000568591 KPNB1Q14974 876 aaKnown RBP19.15■□□□□ 0.66
PKD1-235ENST00000568591 TARBP2Q15633 366 aaKnown RBP19.15■□□□□ 0.66
PKD1-235ENST00000568591 SGSM1Q2NKQ1 1148 aa19.15■□□□□ 0.66
PKD1-235ENST00000568591 NAIF1Q69YI7 327 aaPredicted RBP19.15■□□□□ 0.66
PKD1-235ENST00000568591 SH2D5Q6ZV89 423 aa19.15■□□□□ 0.66
PKD1-235ENST00000568591 ALYREFQ86V81 257 aaKnown RBP19.15■□□□□ 0.66
PKD1-235ENST00000568591 XYLT1Q86Y38 959 aa19.15■□□□□ 0.66
PKD1-235ENST00000568591 NRG4Q8WWG1 115 aa19.15■□□□□ 0.66
PKD1-235ENST00000568591 WRNIP1Q96S55 665 aa19.15■□□□□ 0.66
PKD1-235ENST00000568591 LNPEPQ9UIQ6 1025 aa19.15■□□□□ 0.66
PKD1-235ENST00000568591 CXorf49A8MYA2 514 aaPredicted RBP19.14■□□□□ 0.65
PKD1-235ENST00000568591 TM9SF1O15321 606 aa19.14■□□□□ 0.65
PKD1-235ENST00000568591 TOM1L1O75674 476 aa19.14■□□□□ 0.65
PKD1-235ENST00000568591 DLDP09622 509 aaKnown RBP19.14■□□□□ 0.65
PKD1-235ENST00000568591 NEFHP12036 1026 aa19.14■□□□□ 0.65
PKD1-235ENST00000568591 RASSF2P50749 326 aa19.14■□□□□ 0.65
PKD1-235ENST00000568591 ACSBG2Q5FVE4 666 aa19.14■□□□□ 0.65
PKD1-235ENST00000568591 PPP1R2P3Q6NXS1 205 aa19.14■□□□□ 0.65
PKD1-235ENST00000568591 RNF149Q8NC42 400 aa19.14■□□□□ 0.65
PKD1-235ENST00000568591 FBXO27Q8NI29 283 aa19.14■□□□□ 0.65
PKD1-235ENST00000568591 DTX3LQ8TDB6 740 aa19.14■□□□□ 0.65
PKD1-235ENST00000568591 CFAP36Q96G28 342 aa19.14■□□□□ 0.65
PKD1-235ENST00000568591 TEX13BQ9BXU2 312 aa19.14■□□□□ 0.65
PKD1-235ENST00000568591 VPS11Q9H270 941 aa19.14■□□□□ 0.65
PKD1-235ENST00000568591 TMEM134Q9H6X4 195 aa19.14■□□□□ 0.65
PKD1-235ENST00000568591 SYNCQ9H7C4 482 aa19.14■□□□□ 0.65
PKD1-235ENST00000568591 HACL1Q9UJ83 578 aa19.14■□□□□ 0.65
PKD1-235ENST00000568591 GSC2O15499 205 aa19.14■□□□□ 0.65
PKD1-235ENST00000568591 UGT1A9O60656 530 aa19.14■□□□□ 0.65
PKD1-235ENST00000568591 GRAP2O75791 330 aa19.14■□□□□ 0.65
PKD1-235ENST00000568591 GCKP35557 465 aa19.14■□□□□ 0.65
PKD1-235ENST00000568591 NEK3P51956 506 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms