RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 F8VP50 259 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 PHACTR2O75167 634 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 TCF3P15923 654 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 PFKLP17858 780 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 PTPN1P18031 435 aaKnown RBP16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 HDCP19113 662 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 HOXA6P31267 233 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 CNR2P34972 360 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 IFNAR2P48551 515 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 PDE6CP51160 858 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 NOP14P78316 857 aaKnown RBP16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 PSMD2Q13200 908 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 PUM1Q14671 1186 aaKnown RBP eCLIP16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 LPAL2Q16609 132 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 KMT5BQ4FZB7 885 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 TDRD10Q5VZ19 366 aaKnown RBP16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 HEATR6Q6AI08 1181 aaKnown RBP16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 PKN3Q6P5Z2 889 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 PRR23BQ6ZRT6 265 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 SLC9A9Q8IVB4 645 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 TTC16Q8NEE8 873 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 SH3RF2Q8TEC5 729 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 PARD3BQ8TEW8 1205 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 TMEM174Q8WUU8 243 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 ATP2A3Q93084 1043 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 ELOVL4Q9GZR5 314 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 ECT2Q9H8V3 914 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 VRTNQ9H8Y1 702 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 DMAC2Q9NW81 257 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 DUS2Q9NX74 493 aaKnown RBP16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 DLL3Q9NYJ7 618 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 TRPM5Q9NZQ8 1165 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 NXF1Q9UBU9 619 aaKnown RBP16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 USP25Q9UHP3 1055 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 ARHGAP26Q9UNA1 814 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 WNT6Q9Y6F9 365 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 CACNA1AO00555 2505 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 WDR87Q6ZQQ6 2873 aa16.04■□□□□ 0.16
SCAMP2-209ENST00000567638 LRRIQ3A6PVS8 624 aaPredicted RBP16.04■□□□□ 0.16
SCAMP2-209ENST00000567638 HRO43593 1189 aa16.04■□□□□ 0.16
SCAMP2-209ENST00000567638 MYL1P05976 194 aa16.04■□□□□ 0.16
SCAMP2-209ENST00000567638 CMA1P23946 247 aa16.04■□□□□ 0.16
SCAMP2-209ENST00000567638 GJA4P35212 333 aa16.04■□□□□ 0.16
SCAMP2-209ENST00000567638 AP3M2P53677 418 aa16.04■□□□□ 0.16
SCAMP2-209ENST00000567638 CACNA2D1P54289 1103 aa16.04■□□□□ 0.16
SCAMP2-209ENST00000567638 CLDN10P78369 228 aa16.04■□□□□ 0.16
SCAMP2-209ENST00000567638 SRSF5Q13243 272 aaKnown RBP16.04■□□□□ 0.16
SCAMP2-209ENST00000567638 BIRC3Q13489 604 aa16.04■□□□□ 0.16
SCAMP2-209ENST00000567638 SIM2Q14190 667 aaPredicted RBP16.04■□□□□ 0.16
SCAMP2-209ENST00000567638 ZNF699Q32M78 642 aa16.04■□□□□ 0.16
SCAMP2-209ENST00000567638 EML3Q32P44 896 aa16.04■□□□□ 0.16
SCAMP2-209ENST00000567638 B3GALNT2Q8NCR0 500 aa16.04■□□□□ 0.16
SCAMP2-209ENST00000567638 SPATA32Q96LK8 384 aa16.04■□□□□ 0.16
SCAMP2-209ENST00000567638 P2RY13Q9BPV8 354 aa16.04■□□□□ 0.16
SCAMP2-209ENST00000567638 KCTD10Q9H3F6 313 aa16.04■□□□□ 0.16
SCAMP2-209ENST00000567638 SMYD3Q9H7B4 428 aa16.04■□□□□ 0.16
SCAMP2-209ENST00000567638 TMEM30AQ9NV96 361 aa16.04■□□□□ 0.16
SCAMP2-209ENST00000567638 HPSEQ9Y251 543 aa16.04■□□□□ 0.16
SCAMP2-209ENST00000567638 FRYLO94915 3013 aa16.04■□□□□ 0.16
SCAMP2-209ENST00000567638 MYOFQ9NZM1 2061 aa16.04■□□□□ 0.16
SCAMP2-209ENST00000567638 ATG13O75143 517 aa16.03■□□□□ 0.16
SCAMP2-209ENST00000567638 EGFP01133 1207 aa16.03■□□□□ 0.16
SCAMP2-209ENST00000567638 C4BPAP04003 597 aaKnown RBP16.03■□□□□ 0.16
SCAMP2-209ENST00000567638 DRD1P21728 446 aa16.03■□□□□ 0.16
SCAMP2-209ENST00000567638 TGM1P22735 817 aa16.03■□□□□ 0.16
SCAMP2-209ENST00000567638 HOXC13P31276 330 aa16.03■□□□□ 0.16
SCAMP2-209ENST00000567638 PPP3CCP48454 512 aa16.03■□□□□ 0.16
SCAMP2-209ENST00000567638 GALK1P51570 392 aa16.03■□□□□ 0.16
SCAMP2-209ENST00000567638 KRT85P78386 507 aa16.03■□□□□ 0.16
SCAMP2-209ENST00000567638 LMNB2Q03252 620 aa16.03■□□□□ 0.16
SCAMP2-209ENST00000567638 NCOA4Q13772 614 aa16.03■□□□□ 0.16
SCAMP2-209ENST00000567638 RSPO4Q2I0M5 234 aaPredicted RBP16.03■□□□□ 0.16
SCAMP2-209ENST00000567638 ZNF667Q5HYK9 610 aa16.03■□□□□ 0.16
SCAMP2-209ENST00000567638 NAIF1Q69YI7 327 aaPredicted RBP16.03■□□□□ 0.16
SCAMP2-209ENST00000567638 DGLUCYQ7Z3D6 616 aa16.03■□□□□ 0.16
SCAMP2-209ENST00000567638 WDR5BQ86VZ2 330 aa16.03■□□□□ 0.16
SCAMP2-209ENST00000567638 EXOC4Q96A65 974 aa16.03■□□□□ 0.16
SCAMP2-209ENST00000567638 CHAMP1Q96JM3 812 aa16.03■□□□□ 0.16
SCAMP2-209ENST00000567638 B3GNT5Q9BYG0 378 aa16.03■□□□□ 0.16
SCAMP2-209ENST00000567638 ZNF518BQ9C0D4 1074 aa16.03■□□□□ 0.16
SCAMP2-209ENST00000567638 FBRSL1Q9HCM7 1045 aaKnown RBP16.03■□□□□ 0.16
SCAMP2-209ENST00000567638 PARD6AQ9NPB6 346 aa16.03■□□□□ 0.16
SCAMP2-209ENST00000567638 USP18Q9UMW8 372 aa16.03■□□□□ 0.16
SCAMP2-209ENST00000567638 ZDHHC9Q9Y397 364 aa16.03■□□□□ 0.16
SCAMP2-209ENST00000567638 ZNF840PA6NDX5 716 aa16.02■□□□□ 0.16
SCAMP2-209ENST00000567638 CLDN5O00501 218 aa16.02■□□□□ 0.16
SCAMP2-209ENST00000567638 PDXKO00764 312 aa16.02■□□□□ 0.16
SCAMP2-209ENST00000567638 RNF40O75150 1001 aa16.02■□□□□ 0.16
SCAMP2-209ENST00000567638 CLSTN1O94985 981 aa16.02■□□□□ 0.16
SCAMP2-209ENST00000567638 VNN1O95497 513 aa16.02■□□□□ 0.16
SCAMP2-209ENST00000567638 OLFM2O95897 454 aa16.02■□□□□ 0.16
SCAMP2-209ENST00000567638 NR3C1P04150 777 aa16.02■□□□□ 0.16
SCAMP2-209ENST00000567638 RETP07949 1114 aa16.02■□□□□ 0.16
SCAMP2-209ENST00000567638 CDH8P55286 799 aa16.02■□□□□ 0.16
SCAMP2-209ENST00000567638 ZXDBP98169 803 aa16.02■□□□□ 0.16
SCAMP2-209ENST00000567638 FBXO43Q4G163 708 aa16.02■□□□□ 0.16
SCAMP2-209ENST00000567638 SCARA5Q6ZMJ2 495 aa16.02■□□□□ 0.16
SCAMP2-209ENST00000567638 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.02■□□□□ 0.16
SCAMP2-209ENST00000567638 ATP8B3O60423 1300 aa16.01■□□□□ 0.15
SCAMP2-209ENST00000567638 FAM237AA0A1B0GTK4 181 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms