RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 TLE3Q04726 772 aa10.3□□□□□ -0.76
HERC1-210ENST00000560897 LY6DQ14210 128 aa10.3□□□□□ -0.76
HERC1-210ENST00000560897 HLA-BQ31612 363 aa10.3□□□□□ -0.76
HERC1-210ENST00000560897 EMC10Q5UCC4 262 aa10.3□□□□□ -0.76
HERC1-210ENST00000560897 DCP1BQ8IZD4 617 aaKnown RBP10.3□□□□□ -0.76
HERC1-210ENST00000560897 ARL14EPQ8N8R7 260 aaPredicted RBP10.3□□□□□ -0.76
HERC1-210ENST00000560897 SENP8Q96LD8 212 aa10.3□□□□□ -0.76
HERC1-210ENST00000560897 CYP2S1Q96SQ9 504 aa10.3□□□□□ -0.76
HERC1-210ENST00000560897 ESYT1Q9BSJ8 1104 aa10.3□□□□□ -0.76
HERC1-210ENST00000560897 TARS2Q9BW92 718 aaKnown RBP10.3□□□□□ -0.76
HERC1-210ENST00000560897 FTSJ1Q9UET6 329 aa10.3□□□□□ -0.76
HERC1-210ENST00000560897 PCDHB5Q9Y5E4 795 aa10.3□□□□□ -0.76
HERC1-210ENST00000560897 ANK1P16157 1881 aa10.3□□□□□ -0.76
HERC1-210ENST00000560897 COL5A1P20908 1838 aaPredicted RBP10.29□□□□□ -0.76
HERC1-210ENST00000560897 BCAT2O15382 392 aaPredicted RBP10.29□□□□□ -0.76
HERC1-210ENST00000560897 PRPF40AO75400 957 aaKnown RBP10.29□□□□□ -0.76
HERC1-210ENST00000560897 CYP17A1P05093 508 aa10.29□□□□□ -0.76
HERC1-210ENST00000560897 CDK4P11802 303 aa10.29□□□□□ -0.76
HERC1-210ENST00000560897 TCF3P15923 654 aa10.29□□□□□ -0.76
HERC1-210ENST00000560897 XBP1P17861 261 aa10.29□□□□□ -0.76
HERC1-210ENST00000560897 HDCP19113 662 aa10.29□□□□□ -0.76
HERC1-210ENST00000560897 TXKP42681 527 aa10.29□□□□□ -0.76
HERC1-210ENST00000560897 SLC6A11P48066 632 aa10.29□□□□□ -0.76
HERC1-210ENST00000560897 PPP2R3AQ06190 1150 aa10.29□□□□□ -0.76
HERC1-210ENST00000560897 SPAG1Q07617 926 aa10.29□□□□□ -0.76
HERC1-210ENST00000560897 KCNH2Q12809 1159 aa10.29□□□□□ -0.76
HERC1-210ENST00000560897 NOLC1Q14978 699 aaKnown RBP eCLIP10.29□□□□□ -0.76
HERC1-210ENST00000560897 ADCK5Q3MIX3 580 aa10.29□□□□□ -0.76
HERC1-210ENST00000560897 COLEC12Q5KU26 742 aa10.29□□□□□ -0.76
HERC1-210ENST00000560897 CPLX2Q6PUV4 134 aaKnown RBP10.29□□□□□ -0.76
HERC1-210ENST00000560897 KIAA1324Q6UXG2 1013 aaKnown RBP10.29□□□□□ -0.76
HERC1-210ENST00000560897 FILIP1Q7Z7B0 1213 aa10.29□□□□□ -0.76
HERC1-210ENST00000560897 SFTPA1Q8IWL2 248 aa10.29□□□□□ -0.76
HERC1-210ENST00000560897 SPACA3Q8IXA5 215 aa10.29□□□□□ -0.76
HERC1-210ENST00000560897 KCNV2Q8TDN2 545 aa10.29□□□□□ -0.76
HERC1-210ENST00000560897 FAM117AQ9C073 453 aa10.29□□□□□ -0.76
HERC1-210ENST00000560897 SEMA4CQ9C0C4 833 aa10.29□□□□□ -0.76
HERC1-210ENST00000560897 NRSN2Q9GZP1 204 aa10.29□□□□□ -0.76
HERC1-210ENST00000560897 PLEKHA5Q9HAU0 1116 aa10.29□□□□□ -0.76
HERC1-210ENST00000560897 NCOA5Q9HCD5 579 aaKnown RBP10.29□□□□□ -0.76
HERC1-210ENST00000560897 PTPRHQ9HD43 1115 aa10.29□□□□□ -0.76
HERC1-210ENST00000560897 TUFT1Q9NNX1 390 aa10.29□□□□□ -0.76
HERC1-210ENST00000560897 IL17BQ9UHF5 180 aa10.29□□□□□ -0.76
HERC1-210ENST00000560897 ARHGAP26Q9UNA1 814 aa10.29□□□□□ -0.76
HERC1-210ENST00000560897 TADA3O75528 432 aa10.28□□□□□ -0.76
HERC1-210ENST00000560897 NFICP08651 508 aa10.28□□□□□ -0.76
HERC1-210ENST00000560897 CXCL8P10145 99 aa10.28□□□□□ -0.76
HERC1-210ENST00000560897 ADH5P11766 374 aa10.28□□□□□ -0.76
HERC1-210ENST00000560897 NCAM1P13591 858 aa10.28□□□□□ -0.76
HERC1-210ENST00000560897 NDUFV2P19404 249 aa10.28□□□□□ -0.76
HERC1-210ENST00000560897 CD6P30203 668 aa10.28□□□□□ -0.76
HERC1-210ENST00000560897 ADSSP30520 456 aa10.28□□□□□ -0.76
HERC1-210ENST00000560897 NTSR1P30989 418 aa10.28□□□□□ -0.76
HERC1-210ENST00000560897 RPL10AP62906 217 aaKnown RBP10.28□□□□□ -0.76
HERC1-210ENST00000560897 IRX6P78412 446 aaPredicted RBP10.28□□□□□ -0.76
HERC1-210ENST00000560897 TSPY1Q01534 308 aa10.28□□□□□ -0.76
HERC1-210ENST00000560897 DHCR24Q15392 516 aa10.28□□□□□ -0.76
HERC1-210ENST00000560897 SF3A1Q15459 793 aaKnown RBP10.28□□□□□ -0.76
HERC1-210ENST00000560897 PTPRNQ16849 979 aa10.28□□□□□ -0.76
HERC1-210ENST00000560897 SLC10A6Q3KNW5 377 aa10.28□□□□□ -0.76
HERC1-210ENST00000560897 PKDCCQ504Y2 493 aa10.28□□□□□ -0.76
HERC1-210ENST00000560897 ARHGAP40Q5TG30 622 aa10.28□□□□□ -0.76
HERC1-210ENST00000560897 BTBD8Q5XKL5 378 aa10.28□□□□□ -0.76
HERC1-210ENST00000560897 STKLD1Q8NE28 680 aa10.28□□□□□ -0.76
HERC1-210ENST00000560897 ERMNQ8TAM6 284 aa10.28□□□□□ -0.76
HERC1-210ENST00000560897 SPIRE2Q8WWL2 714 aa10.28□□□□□ -0.76
HERC1-210ENST00000560897 MED8Q96G25 268 aa10.28□□□□□ -0.76
HERC1-210ENST00000560897 SLC22A12Q96S37 553 aa10.28□□□□□ -0.76
HERC1-210ENST00000560897 TMEM134Q9H6X4 195 aa10.28□□□□□ -0.76
HERC1-210ENST00000560897 RPF1Q9H9Y2 349 aaKnown RBP10.28□□□□□ -0.76
HERC1-210ENST00000560897 KCNJ14Q9UNX9 436 aa10.28□□□□□ -0.76
HERC1-210ENST00000560897 BTBD3Q9Y2F9 522 aa10.28□□□□□ -0.76
HERC1-210ENST00000560897 NFE2L3Q9Y4A8 694 aa10.28□□□□□ -0.76
HERC1-210ENST00000560897 ATMQ13315 3056 aa10.27□□□□□ -0.76
HERC1-210ENST00000560897 MYOFQ9NZM1 2061 aa10.27□□□□□ -0.76
HERC1-210ENST00000560897 TCHHQ07283 1943 aa10.27□□□□□ -0.76
HERC1-210ENST00000560897 SPTAN1Q13813 2472 aaKnown RBP10.27□□□□□ -0.77
HERC1-210ENST00000560897 MGAQ8IWI9 3026 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 MYO9AB2RTY4 2548 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 BTBD18B2RXH4 712 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 HAX1O00165 279 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 PROZP22891 400 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 TNFSF9P41273 254 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 WASP42768 502 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 GPR15P49685 360 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 CCT8P50990 548 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 PEX3P56589 373 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 LILRA4P59901 499 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 ATP2C1P98194 919 aaPredicted RBP10.27□□□□□ -0.77
HERC1-210ENST00000560897 MYO1EQ12965 1108 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 STRN3Q13033 797 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 RTP5Q14D33 572 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 NPY5RQ15761 445 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 NFE2Q16621 373 aaPredicted RBP10.27□□□□□ -0.77
HERC1-210ENST00000560897 GAB4Q2WGN9 574 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 TSGA10IPQ3SY00 556 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 SEZ6Q53EL9 994 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 ZC2HC1CQ53FD0 456 aaPredicted RBP10.27□□□□□ -0.77
HERC1-210ENST00000560897 C10orf76Q5T2E6 689 aa10.27□□□□□ -0.77
HERC1-210ENST00000560897 SDHAF4Q5VUM1 108 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms