RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 FAM35AQ86V20 835 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 SPATA2LQ8IUW3 424 aaPredicted RBP9.07□□□□□ -0.96
TRAF3-209ENST00000560463 GPR65Q8IYL9 337 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 RNF168Q8IYW5 571 aaPredicted RBP9.07□□□□□ -0.96
TRAF3-209ENST00000560463 SLC39A11Q8N1S5 342 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 FIBCD1Q8N539 461 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 UBL4BQ8N7F7 174 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 NIPA2Q8N8Q9 360 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 COLGALT1Q8NBJ5 622 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 C2orf15Q8WU43 125 aaKnown RBP9.07□□□□□ -0.96
TRAF3-209ENST00000560463 MYLPFQ96A32 169 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 TMEM169Q96HH4 297 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 HES6Q96HZ4 224 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 PBKQ96KB5 322 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 YME1L1Q96TA2 773 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 NCAPGQ9BPX3 1015 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 LPIN3Q9BQK8 851 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 ZBED2Q9BTP6 218 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 SPG21Q9NZD8 308 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 RNF14Q9UBS8 474 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 PCDHB12Q9Y5F1 795 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 MRFAP1Q9Y605 127 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 SLC4A7Q9Y6M7 1214 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 DOCK6Q96HP0 2047 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 CCDC66A2RUB6 948 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 NT5C1B-RDH14C9J2C7 533 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 CLDN5O00501 218 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 SART1O43290 800 aaKnown RBP9.06□□□□□ -0.96
TRAF3-209ENST00000560463 SPOPO43791 374 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 TBC1D4O60343 1298 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 FBXO21O94952 628 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 FTCDO95954 541 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 GLI1P08151 1106 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 RGS7P49802 495 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 TERF1P54274 439 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 RPL7AP62424 266 aaKnown RBP9.06□□□□□ -0.96
TRAF3-209ENST00000560463 TUBB4BP68371 445 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 GPR17Q13304 367 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 CLUL1Q15846 466 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 WHAMMP3Q1A5X7 153 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 CTXN3Q4LDR2 81 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 SLC39A12Q504Y0 691 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 RAB41Q5JT25 222 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 FAM102AQ5T9C2 384 aaPredicted RBP9.06□□□□□ -0.96
TRAF3-209ENST00000560463 OR6B2Q6IFH4 312 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 FAM117BQ6P1L5 589 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 FAM183BPQ6ZVS7 135 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 SLC26A9Q7LBE3 791 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 PIGZQ86VD9 579 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 CEP57Q86XR8 500 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 SCML4Q8N228 414 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 OR10T2Q8NGX3 314 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 SPPL2BQ8TCT7 592 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 PIK3R5Q8WYR1 880 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 DPF3Q92784 378 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 CLP1Q92989 425 aaKnown RBP9.06□□□□□ -0.96
TRAF3-209ENST00000560463 ABHD8Q96I13 439 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 RPGRIP1Q96KN7 1286 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 MCEEQ96PE7 176 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 OSBPL9Q96SU4 736 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 RAD9AQ99638 391 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 PLVAPQ9BX97 442 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 LRRC4Q9HBW1 653 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 DMAP1Q9NPF5 467 aaPredicted RBP9.06□□□□□ -0.96
TRAF3-209ENST00000560463 CHST7Q9NS84 486 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 KRT82Q9NSB4 513 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 ASNSD1Q9NWL6 643 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 HCSTQ9UBK5 93 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 SSX2IPQ9Y2D8 614 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.06□□□□□ -0.96
TRAF3-209ENST00000560463 RWDD3Q9Y3V2 267 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 PCDHB5Q9Y5E4 795 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 NR2E3Q9Y5X4 410 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 BACE2Q9Y5Z0 518 aa9.06□□□□□ -0.96
TRAF3-209ENST00000560463 MRPL42Q9Y6G3 142 aaKnown RBP9.06□□□□□ -0.96
TRAF3-209ENST00000560463 FAM170AA1A519 330 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 GOLGA8SH3BPF8 625 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 TULP2O00295 520 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 TRIM66O15016 1216 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 PAPSS1O43252 624 aaPredicted RBP9.05□□□□□ -0.96
TRAF3-209ENST00000560463 BEST1O76090 585 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 SLU7O95391 586 aaKnown RBP9.05□□□□□ -0.96
TRAF3-209ENST00000560463 LCP1P13796 627 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 SYN1P17600 705 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 COMTP21964 271 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 BDNFP23560 247 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 CTNNA2P26232 953 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 CTNNA1P35221 906 aaKnown RBP9.05□□□□□ -0.96
TRAF3-209ENST00000560463 RFC1P35251 1148 aaPredicted RBP9.05□□□□□ -0.96
TRAF3-209ENST00000560463 PBX3P40426 434 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 MAGEA11P43364 429 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 MAP3K7CLP57077 242 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 CREMQ03060 361 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 KRT17Q04695 432 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 CKAP4Q07065 602 aaKnown RBP9.05□□□□□ -0.96
TRAF3-209ENST00000560463 RTP2Q5QGT7 225 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 RASIP1Q5U651 963 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 SLC8B1Q6J4K2 584 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 KIAA1841Q6NSI8 718 aa9.05□□□□□ -0.96
TRAF3-209ENST00000560463 LLGL2Q6P1M3 1020 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms