RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 SENP8Q96LD8 212 aa11.11□□□□□ -0.63
APH1B-208ENST00000560353 YTHDC1Q96MU7 727 aaKnown RBP11.11□□□□□ -0.63
APH1B-208ENST00000560353 JAKMIP1Q96N16 626 aaKnown RBP11.11□□□□□ -0.63
APH1B-208ENST00000560353 SLC22A12Q96S37 553 aa11.11□□□□□ -0.63
APH1B-208ENST00000560353 POLD4Q9HCU8 107 aa11.11□□□□□ -0.63
APH1B-208ENST00000560353 TM7SF3Q9NS93 570 aa11.11□□□□□ -0.63
APH1B-208ENST00000560353 CALCOCO1Q9P1Z2 691 aa11.11□□□□□ -0.63
APH1B-208ENST00000560353 DSEQ9UL01 958 aa11.11□□□□□ -0.63
APH1B-208ENST00000560353 UBQLN1Q9UMX0 589 aaKnown RBP11.11□□□□□ -0.63
APH1B-208ENST00000560353 MAGED2Q9UNF1 606 aaPredicted RBP11.11□□□□□ -0.63
APH1B-208ENST00000560353 PLXND1Q9Y4D7 1925 aa11.11□□□□□ -0.63
APH1B-208ENST00000560353 UBR5O95071 2799 aaPredicted RBP11.11□□□□□ -0.63
APH1B-208ENST00000560353 PTPRQQ9UMZ3 2332 aa11.1□□□□□ -0.63
APH1B-208ENST00000560353 B8ZZF3 427 aa11.1□□□□□ -0.63
APH1B-208ENST00000560353 ERVH48-1M5A8F1 160 aa11.1□□□□□ -0.63
APH1B-208ENST00000560353 FLRT2O43155 660 aa11.1□□□□□ -0.63
APH1B-208ENST00000560353 XPOTO43592 962 aaKnown RBP11.1□□□□□ -0.63
APH1B-208ENST00000560353 NDUFS2O75306 463 aa11.1□□□□□ -0.63
APH1B-208ENST00000560353 CER1O95813 267 aa11.1□□□□□ -0.63
APH1B-208ENST00000560353 CYP11A1P05108 521 aa11.1□□□□□ -0.63
APH1B-208ENST00000560353 XBP1P17861 261 aa11.1□□□□□ -0.63
APH1B-208ENST00000560353 GABRG2P18507 467 aa11.1□□□□□ -0.63
APH1B-208ENST00000560353 CDR1P51861 262 aa11.1□□□□□ -0.63
APH1B-208ENST00000560353 SPAG1Q07617 926 aa11.1□□□□□ -0.63
APH1B-208ENST00000560353 SUZ12Q15022 739 aaKnown RBP11.1□□□□□ -0.63
APH1B-208ENST00000560353 TAF1BQ53T94 588 aaPredicted RBP11.1□□□□□ -0.63
APH1B-208ENST00000560353 PCSK4Q6UW60 755 aa11.1□□□□□ -0.63
APH1B-208ENST00000560353 IL27RAQ6UWB1 636 aa11.1□□□□□ -0.63
APH1B-208ENST00000560353 TRMT11Q7Z4G4 463 aaKnown RBP11.1□□□□□ -0.63
APH1B-208ENST00000560353 TMPRSS12Q86WS5 348 aa11.1□□□□□ -0.63
APH1B-208ENST00000560353 METTL23Q86XA0 190 aa11.1□□□□□ -0.63
APH1B-208ENST00000560353 SFTPA1Q8IWL2 248 aa11.1□□□□□ -0.63
APH1B-208ENST00000560353 FAM181AQ8N9Y4 354 aa11.1□□□□□ -0.63
APH1B-208ENST00000560353 TRMT2BQ96GJ1 504 aaKnown RBP11.1□□□□□ -0.63
APH1B-208ENST00000560353 MYRFLQ96LU7 910 aa11.1□□□□□ -0.63
APH1B-208ENST00000560353 DRC1Q96MC2 740 aa11.1□□□□□ -0.63
APH1B-208ENST00000560353 TSPAN18Q96SJ8 248 aa11.1□□□□□ -0.63
APH1B-208ENST00000560353 ARHGEF4Q9NR80 690 aa11.1□□□□□ -0.63
APH1B-208ENST00000560353 ABI2Q9NYB9 513 aaPredicted RBP11.1□□□□□ -0.63
APH1B-208ENST00000560353 ARHGAP26Q9UNA1 814 aa11.1□□□□□ -0.63
APH1B-208ENST00000560353 RBM19Q9Y4C8 960 aaKnown RBP11.1□□□□□ -0.63
APH1B-208ENST00000560353 A0A1B0GTW7 788 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 TTC26A0AVF1 554 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.09□□□□□ -0.63
APH1B-208ENST00000560353 TNFSF14O43557 240 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 NEMFO60524 1076 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 CILPO75339 1184 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 MED24O75448 989 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 TOM1L1O75674 476 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 CLTAP09496 248 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 HDCP19113 662 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 RPS6KB1P23443 525 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 MATKP42679 507 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 NPTX2P47972 431 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 SLC6A11P48066 632 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 PDE6CP51160 858 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 PEX3P56589 373 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 SEMG2Q02383 582 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 KCNB1Q14721 858 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 NOLC1Q14978 699 aaKnown RBP eCLIP11.09□□□□□ -0.63
APH1B-208ENST00000560353 SEZ6Q53EL9 994 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 LRRTM3Q86VH5 581 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 DCP1BQ8IZD4 617 aaKnown RBP11.09□□□□□ -0.63
APH1B-208ENST00000560353 ADGRG2Q8IZP9 1017 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 TMEM130Q8N3G9 435 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 KIAA1958Q8N8K9 716 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 FSIP1Q8NA03 581 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 ERMNQ8TAM6 284 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 MTMR9Q96QG7 549 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 GAREM1Q9H706 876 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 GCNT4Q9P109 453 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 CYP8B1Q9UNU6 501 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 NFE2L3Q9Y4A8 694 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 PCDHB5Q9Y5E4 795 aa11.09□□□□□ -0.63
APH1B-208ENST00000560353 GOLGA4Q13439 2230 aaKnown RBP11.09□□□□□ -0.63
APH1B-208ENST00000560353 PLK4O00444 970 aa11.08□□□□□ -0.64
APH1B-208ENST00000560353 SLC9A3R1O14745 358 aaPredicted RBP11.08□□□□□ -0.64
APH1B-208ENST00000560353 TLX3O43711 291 aaPredicted RBP11.08□□□□□ -0.64
APH1B-208ENST00000560353 PRPF40AO75400 957 aaKnown RBP11.08□□□□□ -0.64
APH1B-208ENST00000560353 NOL4O94818 638 aa11.08□□□□□ -0.64
APH1B-208ENST00000560353 CYP17A1P05093 508 aa11.08□□□□□ -0.64
APH1B-208ENST00000560353 NFICP08651 508 aa11.08□□□□□ -0.64
APH1B-208ENST00000560353 CXCL8P10145 99 aa11.08□□□□□ -0.64
APH1B-208ENST00000560353 RPA1P27694 616 aa11.08□□□□□ -0.64
APH1B-208ENST00000560353 RPL10AP62906 217 aaKnown RBP11.08□□□□□ -0.64
APH1B-208ENST00000560353 PPP2R3AQ06190 1150 aa11.08□□□□□ -0.64
APH1B-208ENST00000560353 MESP2Q0VG99 397 aa11.08□□□□□ -0.64
APH1B-208ENST00000560353 RESTQ13127 1097 aa11.08□□□□□ -0.64
APH1B-208ENST00000560353 DHCR24Q15392 516 aa11.08□□□□□ -0.64
APH1B-208ENST00000560353 PREPLQ4J6C6 727 aaPredicted RBP11.08□□□□□ -0.64
APH1B-208ENST00000560353 ZC2HC1CQ53FD0 456 aaPredicted RBP11.08□□□□□ -0.64
APH1B-208ENST00000560353 EARS2Q5JPH6 523 aaKnown RBP11.08□□□□□ -0.64
APH1B-208ENST00000560353 C6orf118Q5T5N4 469 aa11.08□□□□□ -0.64
APH1B-208ENST00000560353 TAS1R3Q7RTX0 852 aa11.08□□□□□ -0.64
APH1B-208ENST00000560353 ARL14EPQ8N8R7 260 aaPredicted RBP11.08□□□□□ -0.64
APH1B-208ENST00000560353 ANKK1Q8NFD2 765 aa11.08□□□□□ -0.64
APH1B-208ENST00000560353 ENGASEQ8NFI3 743 aa11.08□□□□□ -0.64
APH1B-208ENST00000560353 LRRC15Q8TF66 581 aa11.08□□□□□ -0.64
APH1B-208ENST00000560353 DNASE2BQ8WZ79 361 aa11.08□□□□□ -0.64
APH1B-208ENST00000560353 KCTD12Q96CX2 325 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms