RNA–Protein interactions for RNA: ENST00000558795.1

CPNE6-208, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 1,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-208ENST00000558795 PKMYT1Q99640 499 aa16.41■□□□□ 0.22
CPNE6-208ENST00000558795 LINC00597Q9H2U6 94 aa16.41■□□□□ 0.22
CPNE6-208ENST00000558795 MRPL44Q9H9J2 332 aaKnown RBP16.41■□□□□ 0.22
CPNE6-208ENST00000558795 RBAKQ9NYW8 714 aaPredicted RBP16.41■□□□□ 0.22
CPNE6-208ENST00000558795 FBXO2Q9UK22 296 aaPredicted RBP16.41■□□□□ 0.22
CPNE6-208ENST00000558795 ITGA11Q9UKX5 1188 aa16.41■□□□□ 0.22
CPNE6-208ENST00000558795 MMP17Q9ULZ9 603 aa16.41■□□□□ 0.22
CPNE6-208ENST00000558795 ARHGAP26Q9UNA1 814 aa16.41■□□□□ 0.22
CPNE6-208ENST00000558795 R3HCC1Q9Y3T6 440 aaKnown RBP16.41■□□□□ 0.22
CPNE6-208ENST00000558795 SNX9Q9Y5X1 595 aa16.41■□□□□ 0.22
CPNE6-208ENST00000558795 CUTAO60888 179 aa16.4■□□□□ 0.22
CPNE6-208ENST00000558795 LDHAP00338 332 aaKnown RBP16.4■□□□□ 0.22
CPNE6-208ENST00000558795 TCF3P15923 654 aa16.4■□□□□ 0.22
CPNE6-208ENST00000558795 CCDC142Q17RM4 750 aa16.4■□□□□ 0.22
CPNE6-208ENST00000558795 C4orf50Q6ZRC1 276 aa16.4■□□□□ 0.22
CPNE6-208ENST00000558795 DYMQ7RTS9 669 aa16.4■□□□□ 0.22
CPNE6-208ENST00000558795 OSTM1Q86WC4 334 aa16.4■□□□□ 0.22
CPNE6-208ENST00000558795 CCDC33Q8N5R6 958 aa16.4■□□□□ 0.22
CPNE6-208ENST00000558795 TOP6BLQ8N6T0 577 aa16.4■□□□□ 0.22
CPNE6-208ENST00000558795 MDGA1Q8NFP4 955 aa16.4■□□□□ 0.22
CPNE6-208ENST00000558795 NOC3LQ8WTT2 800 aaKnown RBP16.4■□□□□ 0.22
CPNE6-208ENST00000558795 SPACA7Q96KW9 195 aa16.4■□□□□ 0.22
CPNE6-208ENST00000558795 ACCSQ96QU6 501 aa16.4■□□□□ 0.22
CPNE6-208ENST00000558795 GDAP2Q9NXN4 497 aa16.4■□□□□ 0.22
CPNE6-208ENST00000558795 MYMKA6NI61 221 aa16.39■□□□□ 0.21
CPNE6-208ENST00000558795 K7EQS6 105 aa16.39■□□□□ 0.21
CPNE6-208ENST00000558795 CDX4O14627 284 aaPredicted RBP16.39■□□□□ 0.21
CPNE6-208ENST00000558795 MAP3K13O43283 966 aa16.39■□□□□ 0.21
CPNE6-208ENST00000558795 TMEM191BP0C7N4 346 aa16.39■□□□□ 0.21
CPNE6-208ENST00000558795 OPRD1P41143 372 aa16.39■□□□□ 0.21
CPNE6-208ENST00000558795 MAGEA11P43364 429 aa16.39■□□□□ 0.21
CPNE6-208ENST00000558795 WNT7BP56706 349 aa16.39■□□□□ 0.21
CPNE6-208ENST00000558795 IRX4P78413 519 aa16.39■□□□□ 0.21
CPNE6-208ENST00000558795 MRPS21P82921 87 aaKnown RBP16.39■□□□□ 0.21
CPNE6-208ENST00000558795 RBP5P82980 135 aa16.39■□□□□ 0.21
CPNE6-208ENST00000558795 GRIN1Q05586 938 aa16.39■□□□□ 0.21
CPNE6-208ENST00000558795 LMAN2Q12907 356 aa16.39■□□□□ 0.21
CPNE6-208ENST00000558795 CRY1Q16526 586 aa16.39■□□□□ 0.21
CPNE6-208ENST00000558795 LPCAT2Q7L5N7 544 aa16.39■□□□□ 0.21
CPNE6-208ENST00000558795 DEFB124Q8NES8 71 aa16.39■□□□□ 0.21
CPNE6-208ENST00000558795 SCNM1Q9BWG6 230 aa16.39■□□□□ 0.21
CPNE6-208ENST00000558795 NUSAP1Q9BXS6 441 aaKnown RBP16.39■□□□□ 0.21
CPNE6-208ENST00000558795 TRPM5Q9NZQ8 1165 aa16.39■□□□□ 0.21
CPNE6-208ENST00000558795 MAGEC2Q9UBF1 373 aaPredicted RBP16.39■□□□□ 0.21
CPNE6-208ENST00000558795 SEL1LQ9UBV2 794 aa16.39■□□□□ 0.21
CPNE6-208ENST00000558795 WASF3Q9UPY6 502 aa16.39■□□□□ 0.21
CPNE6-208ENST00000558795 FRYQ5TBA9 3013 aa16.38■□□□□ 0.21
CPNE6-208ENST00000558795 HCRTO43612 131 aa16.38■□□□□ 0.21
CPNE6-208ENST00000558795 PPP1R37O75864 691 aa16.38■□□□□ 0.21
CPNE6-208ENST00000558795 TOP3BO95985 862 aaKnown RBP16.38■□□□□ 0.21
CPNE6-208ENST00000558795 PFKLP17858 780 aa16.38■□□□□ 0.21
CPNE6-208ENST00000558795 ANXA13P27216 316 aa16.38■□□□□ 0.21
CPNE6-208ENST00000558795 TXLNAP40222 546 aa16.38■□□□□ 0.21
CPNE6-208ENST00000558795 MYO1EQ12965 1108 aa16.38■□□□□ 0.21
CPNE6-208ENST00000558795 TRIM61Q5EBN2 209 aa16.38■□□□□ 0.21
CPNE6-208ENST00000558795 L1TD1Q5T7N2 865 aaKnown RBP16.38■□□□□ 0.21
CPNE6-208ENST00000558795 LMBRD2Q68DH5 695 aaPredicted RBP16.38■□□□□ 0.21
CPNE6-208ENST00000558795 CLEC17AQ6ZS10 378 aa16.38■□□□□ 0.21
CPNE6-208ENST00000558795 ARMCX6Q7L4S7 300 aa16.38■□□□□ 0.21
CPNE6-208ENST00000558795 SYCP3Q8IZU3 236 aa16.38■□□□□ 0.21
CPNE6-208ENST00000558795 WHAMMQ8TF30 809 aa16.38■□□□□ 0.21
CPNE6-208ENST00000558795 CLIC6Q96NY7 704 aa16.38■□□□□ 0.21
CPNE6-208ENST00000558795 GBP4Q96PP9 640 aa16.38■□□□□ 0.21
CPNE6-208ENST00000558795 SYT15Q9BQS2 421 aa16.38■□□□□ 0.21
CPNE6-208ENST00000558795 SLC32A1Q9H598 525 aa16.38■□□□□ 0.21
CPNE6-208ENST00000558795 EHD2Q9NZN4 543 aa16.38■□□□□ 0.21
CPNE6-208ENST00000558795 TBC1D7Q9P0N9 293 aa16.38■□□□□ 0.21
CPNE6-208ENST00000558795 BCCIPQ9P287 314 aaKnown RBP eCLIP16.38■□□□□ 0.21
CPNE6-208ENST00000558795 EVLQ9UI08 416 aaPredicted RBP16.38■□□□□ 0.21
CPNE6-208ENST00000558795 PCDHA7Q9UN72 937 aa16.38■□□□□ 0.21
CPNE6-208ENST00000558795 IGF2RP11717 2491 aa16.38■□□□□ 0.21
CPNE6-208ENST00000558795 GOLGA8IPA6NC78 632 aa16.37■□□□□ 0.21
CPNE6-208ENST00000558795 GOLGA8JA6NMD2 632 aa16.37■□□□□ 0.21
CPNE6-208ENST00000558795 LEFTY2O00292 366 aa16.37■□□□□ 0.21
CPNE6-208ENST00000558795 SLC9A3R1O14745 358 aaPredicted RBP16.37■□□□□ 0.21
CPNE6-208ENST00000558795 GABRDO14764 452 aa16.37■□□□□ 0.21
CPNE6-208ENST00000558795 GCNT3O95395 438 aa16.37■□□□□ 0.21
CPNE6-208ENST00000558795 CYP17A1P05093 508 aa16.37■□□□□ 0.21
CPNE6-208ENST00000558795 GAP43P17677 238 aa16.37■□□□□ 0.21
CPNE6-208ENST00000558795 GARTP22102 1010 aa16.37■□□□□ 0.21
CPNE6-208ENST00000558795 GRIK1P39086 918 aa16.37■□□□□ 0.21
CPNE6-208ENST00000558795 MAPK8P45983 427 aa16.37■□□□□ 0.21
CPNE6-208ENST00000558795 PSMC1P62191 440 aaKnown RBP16.37■□□□□ 0.21
CPNE6-208ENST00000558795 KCNA1Q09470 495 aa16.37■□□□□ 0.21
CPNE6-208ENST00000558795 COL9A2Q14055 689 aaPredicted RBP16.37■□□□□ 0.21
CPNE6-208ENST00000558795 MAPRE1Q15691 268 aaKnown RBP16.37■□□□□ 0.21
CPNE6-208ENST00000558795 SOWAHAQ2M3V2 549 aa16.37■□□□□ 0.21
CPNE6-208ENST00000558795 KIAA1211LQ6NV74 962 aa16.37■□□□□ 0.21
CPNE6-208ENST00000558795 FAM171BQ6P995 826 aa16.37■□□□□ 0.21
CPNE6-208ENST00000558795 VSTM1Q6UX27 236 aa16.37■□□□□ 0.21
CPNE6-208ENST00000558795 FILIP1Q7Z7B0 1213 aa16.37■□□□□ 0.21
CPNE6-208ENST00000558795 ALLCQ8N6M5 410 aa16.37■□□□□ 0.21
CPNE6-208ENST00000558795 ZSWIM2Q8NEG5 633 aa16.37■□□□□ 0.21
CPNE6-208ENST00000558795 RLN3Q8WXF3 142 aa16.37■□□□□ 0.21
CPNE6-208ENST00000558795 FAM84AQ96KN4 292 aa16.37■□□□□ 0.21
CPNE6-208ENST00000558795 SPATA17Q96L03 361 aa16.37■□□□□ 0.21
CPNE6-208ENST00000558795 CEP295NLQ96MC4 621 aa16.37■□□□□ 0.21
CPNE6-208ENST00000558795 TMEM121BQ9BXQ6 578 aaPredicted RBP16.37■□□□□ 0.21
CPNE6-208ENST00000558795 MTMR12Q9C0I1 747 aa16.37■□□□□ 0.21
CPNE6-208ENST00000558795 GDPD2Q9HCC8 539 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms