RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 MYCBPAPQ8TBZ2 947 aa16.51■□□□□ 0.23
LINC01220-201ENST00000558575 KREMEN1Q96MU8 473 aa16.51■□□□□ 0.23
LINC01220-201ENST00000558575 NT5C1BQ96P26 610 aa16.51■□□□□ 0.23
LINC01220-201ENST00000558575 RHOBTB2Q9BYZ6 727 aa16.51■□□□□ 0.23
LINC01220-201ENST00000558575 EPC1Q9H2F5 836 aa16.51■□□□□ 0.23
LINC01220-201ENST00000558575 CISHQ9NSE2 258 aa16.51■□□□□ 0.23
LINC01220-201ENST00000558575 ZDHHC7Q9NXF8 308 aa16.51■□□□□ 0.23
LINC01220-201ENST00000558575 GCNT4Q9P109 453 aa16.51■□□□□ 0.23
LINC01220-201ENST00000558575 DPP7Q9UHL4 492 aa16.51■□□□□ 0.23
LINC01220-201ENST00000558575 INSL5Q9Y5Q6 135 aa16.51■□□□□ 0.23
LINC01220-201ENST00000558575 PRRG1O14668 218 aa16.5■□□□□ 0.23
LINC01220-201ENST00000558575 CCL16O15467 120 aa16.5■□□□□ 0.23
LINC01220-201ENST00000558575 HNRNPA1P09651 372 aaKnown RBP eCLIP16.5■□□□□ 0.23
LINC01220-201ENST00000558575 HAPLN1P10915 354 aaPredicted RBP16.5■□□□□ 0.23
LINC01220-201ENST00000558575 CYP2F1P24903 491 aa16.5■□□□□ 0.23
LINC01220-201ENST00000558575 CETN1Q12798 172 aa16.5■□□□□ 0.23
LINC01220-201ENST00000558575 SMARCB1Q12824 385 aa16.5■□□□□ 0.23
LINC01220-201ENST00000558575 NFE2Q16621 373 aaPredicted RBP16.5■□□□□ 0.23
LINC01220-201ENST00000558575 EXOC3L4Q17RC7 722 aa16.5■□□□□ 0.23
LINC01220-201ENST00000558575 MDH1BQ5I0G3 518 aa16.5■□□□□ 0.23
LINC01220-201ENST00000558575 PPM1LQ5SGD2 360 aa16.5■□□□□ 0.23
LINC01220-201ENST00000558575 LIN9Q5TKA1 542 aa16.5■□□□□ 0.23
LINC01220-201ENST00000558575 GJB7Q6PEY0 223 aa16.5■□□□□ 0.23
LINC01220-201ENST00000558575 TRIM65Q6PJ69 517 aa16.5■□□□□ 0.23
LINC01220-201ENST00000558575 LRSAM1Q6UWE0 723 aa16.5■□□□□ 0.23
LINC01220-201ENST00000558575 GBP6Q6ZN66 633 aa16.5■□□□□ 0.23
LINC01220-201ENST00000558575 RRAGAQ7L523 313 aa16.5■□□□□ 0.23
LINC01220-201ENST00000558575 C12orf29Q8N999 325 aa16.5■□□□□ 0.23
LINC01220-201ENST00000558575 ZBTB44Q8NCP5 570 aa16.5■□□□□ 0.23
LINC01220-201ENST00000558575 B3GALNT2Q8NCR0 500 aa16.5■□□□□ 0.23
LINC01220-201ENST00000558575 MYLPFQ96A32 169 aa16.5■□□□□ 0.23
LINC01220-201ENST00000558575 PCED1BQ96HM7 432 aa16.5■□□□□ 0.23
LINC01220-201ENST00000558575 B3GNT5Q9BYG0 378 aa16.5■□□□□ 0.23
LINC01220-201ENST00000558575 WDR6Q9NNW5 1121 aaKnown RBP16.5■□□□□ 0.23
LINC01220-201ENST00000558575 SPATA6Q9NWH7 488 aaPredicted RBP16.5■□□□□ 0.23
LINC01220-201ENST00000558575 CEP72Q9P209 647 aa16.5■□□□□ 0.23
LINC01220-201ENST00000558575 HSFX1Q9UBD0 423 aa16.5■□□□□ 0.23
LINC01220-201ENST00000558575 FBXO4Q9UKT5 387 aa16.5■□□□□ 0.23
LINC01220-201ENST00000558575 YIPF1Q9Y548 306 aa16.5■□□□□ 0.23
LINC01220-201ENST00000558575 PCDHB5Q9Y5E4 795 aa16.5■□□□□ 0.23
LINC01220-201ENST00000558575 PCDHGA2Q9Y5H1 932 aa16.5■□□□□ 0.23
LINC01220-201ENST00000558575 RNF225M0QZC1 329 aaPredicted RBP16.49■□□□□ 0.23
LINC01220-201ENST00000558575 CLDN5O00501 218 aa16.49■□□□□ 0.23
LINC01220-201ENST00000558575 LILRB5O75023 590 aa16.49■□□□□ 0.23
LINC01220-201ENST00000558575 CDK11BP21127 795 aaKnown RBP16.49■□□□□ 0.23
LINC01220-201ENST00000558575 HOXA9P31269 272 aa16.49■□□□□ 0.23
LINC01220-201ENST00000558575 GPR15P49685 360 aa16.49■□□□□ 0.23
LINC01220-201ENST00000558575 RAD23BP54727 409 aa16.49■□□□□ 0.23
LINC01220-201ENST00000558575 STARD6P59095 220 aa16.49■□□□□ 0.23
LINC01220-201ENST00000558575 CSTF1Q05048 431 aaKnown RBP16.49■□□□□ 0.23
LINC01220-201ENST00000558575 SPPL2BQ8TCT7 592 aa16.49■□□□□ 0.23
LINC01220-201ENST00000558575 C2orf15Q8WU43 125 aaKnown RBP16.49■□□□□ 0.23
LINC01220-201ENST00000558575 UBE2TQ9NPD8 197 aaPredicted RBP16.49■□□□□ 0.23
LINC01220-201ENST00000558575 SLC2A4RGQ9NR83 387 aa16.49■□□□□ 0.23
LINC01220-201ENST00000558575 TMEM30AQ9NV96 361 aa16.49■□□□□ 0.23
LINC01220-201ENST00000558575 ABI2Q9NYB9 513 aaPredicted RBP16.49■□□□□ 0.23
LINC01220-201ENST00000558575 AJAP1Q9UKB5 411 aaPredicted RBP16.49■□□□□ 0.23
LINC01220-201ENST00000558575 MTF2Q9Y483 593 aaPredicted RBP16.49■□□□□ 0.23
LINC01220-201ENST00000558575 SPEGQ15772 3267 aa16.48■□□□□ 0.23
LINC01220-201ENST00000558575 ANHXE9PGG2 379 aa16.48■□□□□ 0.23
LINC01220-201ENST00000558575 LAMTOR5O43504 91 aa16.48■□□□□ 0.23
LINC01220-201ENST00000558575 CAVIN2O95810 425 aa16.48■□□□□ 0.23
LINC01220-201ENST00000558575 POU2F2P09086 479 aa16.48■□□□□ 0.23
LINC01220-201ENST00000558575 ATF6P18850 670 aa16.48■□□□□ 0.23
LINC01220-201ENST00000558575 CACNA2D1P54289 1103 aa16.48■□□□□ 0.23
LINC01220-201ENST00000558575 ZNF445P59923 1031 aa16.48■□□□□ 0.23
LINC01220-201ENST00000558575 NTHL1P78549 312 aa16.48■□□□□ 0.23
LINC01220-201ENST00000558575 GCNT1Q02742 428 aa16.48■□□□□ 0.23
LINC01220-201ENST00000558575 TWF1Q12792 350 aa16.48■□□□□ 0.23
LINC01220-201ENST00000558575 HTR4Q13639 388 aa16.48■□□□□ 0.23
LINC01220-201ENST00000558575 CFAP221Q4G0U5 840 aa16.48■□□□□ 0.23
LINC01220-201ENST00000558575 ZNF394Q53GI3 561 aa16.48■□□□□ 0.23
LINC01220-201ENST00000558575 FUKQ8N0W3 1084 aa16.48■□□□□ 0.23
LINC01220-201ENST00000558575 PPM1KQ8N3J5 372 aa16.48■□□□□ 0.23
LINC01220-201ENST00000558575 SLC4A11Q8NBS3 891 aa16.48■□□□□ 0.23
LINC01220-201ENST00000558575 FAM200AQ8TCP9 573 aa16.48■□□□□ 0.23
LINC01220-201ENST00000558575 ATRIPQ8WXE1 791 aa16.48■□□□□ 0.23
LINC01220-201ENST00000558575 SMG7Q92540 1137 aaKnown RBP16.48■□□□□ 0.23
LINC01220-201ENST00000558575 NELL1Q92832 810 aa16.48■□□□□ 0.23
LINC01220-201ENST00000558575 NXPE3Q969Y0 559 aa16.48■□□□□ 0.23
LINC01220-201ENST00000558575 NT5C1AQ9BXI3 368 aa16.48■□□□□ 0.23
LINC01220-201ENST00000558575 ZNF518BQ9C0D4 1074 aa16.48■□□□□ 0.23
LINC01220-201ENST00000558575 ABCB6Q9NP58 842 aa16.48■□□□□ 0.23
LINC01220-201ENST00000558575 HCFC1R1Q9NWW0 138 aa16.48■□□□□ 0.23
LINC01220-201ENST00000558575 DNMT3BQ9UBC3 853 aaKnown RBP16.48■□□□□ 0.23
LINC01220-201ENST00000558575 GREB1Q4ZG55 1949 aa16.48■□□□□ 0.23
LINC01220-201ENST00000558575 GCN1Q92616 2671 aaKnown RBP16.47■□□□□ 0.23
LINC01220-201ENST00000558575 NOTCH4Q99466 2003 aa16.47■□□□□ 0.23
LINC01220-201ENST00000558575 ASPMQ8IZT6 3477 aa16.47■□□□□ 0.23
LINC01220-201ENST00000558575 LGALS16A8MUM7 142 aa16.47■□□□□ 0.23
LINC01220-201ENST00000558575 BECN2A8MW95 431 aa16.47■□□□□ 0.23
LINC01220-201ENST00000558575 NRG2O14511 850 aaPredicted RBP16.47■□□□□ 0.23
LINC01220-201ENST00000558575 BDNFP23560 247 aa16.47■□□□□ 0.23
LINC01220-201ENST00000558575 TBXAS1P24557 533 aaPredicted RBP16.47■□□□□ 0.23
LINC01220-201ENST00000558575 TUFMP49411 452 aaKnown RBP16.47■□□□□ 0.23
LINC01220-201ENST00000558575 KLK7P49862 253 aa16.47■□□□□ 0.23
LINC01220-201ENST00000558575 DDR2Q16832 855 aa16.47■□□□□ 0.23
LINC01220-201ENST00000558575 MGAT5BQ3V5L5 792 aa16.47■□□□□ 0.23
LINC01220-201ENST00000558575 SDHAF4Q5VUM1 108 aa16.47■□□□□ 0.23
LINC01220-201ENST00000558575 ELMSAN1Q6PJG2 1045 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms