RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 GRIA2P42262 883 aa13.51□□□□□ -0.25
PSEN1-220ENST00000557037 TXKP42681 527 aa13.51□□□□□ -0.25
PSEN1-220ENST00000557037 RESTQ13127 1097 aa13.51□□□□□ -0.25
PSEN1-220ENST00000557037 DHCR24Q15392 516 aa13.51□□□□□ -0.25
PSEN1-220ENST00000557037 CALCRLQ16602 461 aa13.51□□□□□ -0.25
PSEN1-220ENST00000557037 PTPRNQ16849 979 aa13.51□□□□□ -0.25
PSEN1-220ENST00000557037 EARS2Q5JPH6 523 aaKnown RBP13.51□□□□□ -0.25
PSEN1-220ENST00000557037 MPZL3Q6UWV2 235 aa13.51□□□□□ -0.25
PSEN1-220ENST00000557037 DBX2Q6ZNG2 339 aa13.51□□□□□ -0.25
PSEN1-220ENST00000557037 TAS1R3Q7RTX0 852 aa13.51□□□□□ -0.25
PSEN1-220ENST00000557037 FILIP1Q7Z7B0 1213 aa13.51□□□□□ -0.25
PSEN1-220ENST00000557037 TMPRSS12Q86WS5 348 aa13.51□□□□□ -0.25
PSEN1-220ENST00000557037 CATSPER3Q86XQ3 398 aa13.51□□□□□ -0.25
PSEN1-220ENST00000557037 SNIP1Q8TAD8 396 aaKnown RBP13.51□□□□□ -0.25
PSEN1-220ENST00000557037 SPPL2BQ8TCT7 592 aa13.51□□□□□ -0.25
PSEN1-220ENST00000557037 FOXJ1Q92949 421 aa13.51□□□□□ -0.25
PSEN1-220ENST00000557037 WBP1Q96G27 269 aa13.51□□□□□ -0.25
PSEN1-220ENST00000557037 GMIPQ9P107 970 aa13.51□□□□□ -0.25
PSEN1-220ENST00000557037 GCNT4Q9P109 453 aa13.51□□□□□ -0.25
PSEN1-220ENST00000557037 NXF1Q9UBU9 619 aaKnown RBP13.51□□□□□ -0.25
PSEN1-220ENST00000557037 DAXXQ9UER7 740 aaPredicted RBP13.51□□□□□ -0.25
PSEN1-220ENST00000557037 IL17BQ9UHF5 180 aa13.51□□□□□ -0.25
PSEN1-220ENST00000557037 PCDHGB2Q9Y5G2 931 aa13.51□□□□□ -0.25
PSEN1-220ENST00000557037 PHLPP2Q6ZVD8 1323 aa13.5□□□□□ -0.25
PSEN1-220ENST00000557037 ZBTB24O43167 697 aaPredicted RBP13.5□□□□□ -0.25
PSEN1-220ENST00000557037 ZNF217O75362 1048 aa13.5□□□□□ -0.25
PSEN1-220ENST00000557037 PRPF40AO75400 957 aaKnown RBP13.5□□□□□ -0.25
PSEN1-220ENST00000557037 DEXIO95424 95 aa13.5□□□□□ -0.25
PSEN1-220ENST00000557037 HDCP19113 662 aa13.5□□□□□ -0.25
PSEN1-220ENST00000557037 PROZP22891 400 aa13.5□□□□□ -0.25
PSEN1-220ENST00000557037 TNFRSF4P43489 277 aa13.5□□□□□ -0.25
PSEN1-220ENST00000557037 LILRA4P59901 499 aa13.5□□□□□ -0.25
PSEN1-220ENST00000557037 ATP2C1P98194 919 aaPredicted RBP13.5□□□□□ -0.25
PSEN1-220ENST00000557037 RHDQ02161 417 aa13.5□□□□□ -0.25
PSEN1-220ENST00000557037 KCNH2Q12809 1159 aa13.5□□□□□ -0.25
PSEN1-220ENST00000557037 KCNB1Q14721 858 aa13.5□□□□□ -0.25
PSEN1-220ENST00000557037 DDR2Q16832 855 aa13.5□□□□□ -0.25
PSEN1-220ENST00000557037 ARHGAP40Q5TG30 622 aa13.5□□□□□ -0.25
PSEN1-220ENST00000557037 ZNF513Q8N8E2 541 aaPredicted RBP13.5□□□□□ -0.25
PSEN1-220ENST00000557037 C2orf15Q8WU43 125 aaKnown RBP13.5□□□□□ -0.25
PSEN1-220ENST00000557037 SPIRE2Q8WWL2 714 aa13.5□□□□□ -0.25
PSEN1-220ENST00000557037 FGF11Q92914 225 aa13.5□□□□□ -0.25
PSEN1-220ENST00000557037 UBQLN1Q9UMX0 589 aaKnown RBP13.5□□□□□ -0.25
PSEN1-220ENST00000557037 A0A0A0MRY4 1105 aa13.49□□□□□ -0.25
PSEN1-220ENST00000557037 A0A1B0GVT2 93 aa13.49□□□□□ -0.25
PSEN1-220ENST00000557037 A0A1W2PQF6 199 aa13.49□□□□□ -0.25
PSEN1-220ENST00000557037 TBC1D3BA6NDS4 549 aa13.49□□□□□ -0.25
PSEN1-220ENST00000557037 LEFTY2O00292 366 aa13.49□□□□□ -0.25
PSEN1-220ENST00000557037 HMGB1P09429 215 aaKnown RBP13.49□□□□□ -0.25
PSEN1-220ENST00000557037 PDIA3P30101 505 aaKnown RBP13.49□□□□□ -0.25
PSEN1-220ENST00000557037 TNFSF9P41273 254 aa13.49□□□□□ -0.25
PSEN1-220ENST00000557037 PEX3P56589 373 aa13.49□□□□□ -0.25
PSEN1-220ENST00000557037 ZXDBP98169 803 aa13.49□□□□□ -0.25
PSEN1-220ENST00000557037 KRT32Q14532 448 aa13.49□□□□□ -0.25
PSEN1-220ENST00000557037 SUZ12Q15022 739 aaKnown RBP13.49□□□□□ -0.25
PSEN1-220ENST00000557037 TSGA10IPQ3SY00 556 aa13.49□□□□□ -0.25
PSEN1-220ENST00000557037 IL27RAQ6UWB1 636 aa13.49□□□□□ -0.25
PSEN1-220ENST00000557037 MIB1Q86YT6 1006 aa13.49□□□□□ -0.25
PSEN1-220ENST00000557037 ADGRG2Q8IZP9 1017 aa13.49□□□□□ -0.25
PSEN1-220ENST00000557037 TMEM176AQ96HP8 235 aa13.49□□□□□ -0.25
PSEN1-220ENST00000557037 NAF1Q96HR8 494 aaKnown RBP13.49□□□□□ -0.25
PSEN1-220ENST00000557037 DRC1Q96MC2 740 aa13.49□□□□□ -0.25
PSEN1-220ENST00000557037 CPNE5Q9HCH3 593 aa13.49□□□□□ -0.25
PSEN1-220ENST00000557037 GJB4Q9NTQ9 266 aa13.49□□□□□ -0.25
PSEN1-220ENST00000557037 TMLHEQ9NVH6 421 aa13.49□□□□□ -0.25
PSEN1-220ENST00000557037 ARHGAP26Q9UNA1 814 aa13.49□□□□□ -0.25
PSEN1-220ENST00000557037 PCDHB5Q9Y5E4 795 aa13.49□□□□□ -0.25
PSEN1-220ENST00000557037 USP9YO00507 2555 aaPredicted RBP13.48□□□□□ -0.25
PSEN1-220ENST00000557037 BCAT2O15382 392 aaPredicted RBP13.48□□□□□ -0.25
PSEN1-220ENST00000557037 BRINP1O60477 761 aa13.48□□□□□ -0.25
PSEN1-220ENST00000557037 NOL4O94818 638 aa13.48□□□□□ -0.25
PSEN1-220ENST00000557037 CYP3A5P20815 502 aa13.48□□□□□ -0.25
PSEN1-220ENST00000557037 HNF1BP35680 557 aa13.48□□□□□ -0.25
PSEN1-220ENST00000557037 NPTX2P47972 431 aa13.48□□□□□ -0.25
PSEN1-220ENST00000557037 TARDBPQ13148 414 aaKnown RBP eCLIP13.48□□□□□ -0.25
PSEN1-220ENST00000557037 NOLC1Q14978 699 aaKnown RBP eCLIP13.48□□□□□ -0.25
PSEN1-220ENST00000557037 SAFBQ15424 915 aaKnown RBP eCLIP13.48□□□□□ -0.25
PSEN1-220ENST00000557037 ZBTB6Q15916 424 aa13.48□□□□□ -0.25
PSEN1-220ENST00000557037 RHBDF2Q6PJF5 856 aa13.48□□□□□ -0.25
PSEN1-220ENST00000557037 KIAA1324Q6UXG2 1013 aaKnown RBP13.48□□□□□ -0.25
PSEN1-220ENST00000557037 METTL23Q86XA0 190 aa13.48□□□□□ -0.25
PSEN1-220ENST00000557037 THEM5Q8N1Q8 247 aa13.48□□□□□ -0.25
PSEN1-220ENST00000557037 NAT16Q8N8M0 369 aa13.48□□□□□ -0.25
PSEN1-220ENST00000557037 IPO4Q8TEX9 1081 aaKnown RBP13.48□□□□□ -0.25
PSEN1-220ENST00000557037 DNASE2BQ8WZ79 361 aa13.48□□□□□ -0.25
PSEN1-220ENST00000557037 KIFAP3Q92845 792 aa13.48□□□□□ -0.25
PSEN1-220ENST00000557037 ACOX2Q99424 681 aa13.48□□□□□ -0.25
PSEN1-220ENST00000557037 GPR174Q9BXC1 333 aa13.48□□□□□ -0.25
PSEN1-220ENST00000557037 TUFT1Q9NNX1 390 aa13.48□□□□□ -0.25
PSEN1-220ENST00000557037 UXTQ9UBK9 157 aaPredicted RBP13.48□□□□□ -0.25
PSEN1-220ENST00000557037 HCN2Q9UL51 889 aa13.48□□□□□ -0.25
PSEN1-220ENST00000557037 ANAPC1Q9H1A4 1944 aa13.48□□□□□ -0.25
PSEN1-220ENST00000557037 TLN1Q9Y490 2541 aaKnown RBP13.47□□□□□ -0.25
PSEN1-220ENST00000557037 MYLKQ15746 1914 aa13.47□□□□□ -0.25
PSEN1-220ENST00000557037 TTC26A0AVF1 554 aa13.47□□□□□ -0.25
PSEN1-220ENST00000557037 LACTBL1A8MY62 500 aa13.47□□□□□ -0.25
PSEN1-220ENST00000557037 KCNK3O14649 394 aa13.47□□□□□ -0.25
PSEN1-220ENST00000557037 DTNBO60941 627 aa13.47□□□□□ -0.25
PSEN1-220ENST00000557037 CYP11A1P05108 521 aa13.47□□□□□ -0.25
PSEN1-220ENST00000557037 ADH5P11766 374 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms