RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 COL28A1Q2UY09 1125 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 UAP1L1Q3KQV9 507 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 OTUD6AQ7L8S5 288 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 C4orf19Q8IY42 314 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 ELMOD1Q8N336 334 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 LEMD2Q8NC56 503 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 GIMAP7Q8NHV1 300 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 ETNPPLQ8TBG4 499 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 TBCKQ8TEA7 893 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 LRRC3BQ96PB8 259 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 TMEM209Q96SK2 561 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 NFKBIZQ9BYH8 718 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 CXCL16Q9H2A7 254 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 SLC32A1Q9H598 525 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 ASAH2Q9NR71 780 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 SNTG2Q9NY99 539 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 GTSE1Q9NYZ3 720 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 CEP72Q9P209 647 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 WRAP73Q9P2S5 460 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-236ENST00000556220 FOXD3Q9UJU5 478 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-236ENST00000556220 INSL5Q9Y5Q6 135 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 OAS3Q9Y6K5 1087 aaKnown RBP7.54□□□□□ -1.2
ATXN3-236ENST00000556220 SPTA1P02549 2419 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 MYO18BQ8IUG5 2567 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 LOC100289279A0A1B0GTE1 492 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 GOLGA8AA7E2F4 631 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 GOLGA8BA8MQT2 603 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 H0Y626 953 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 MEFVO15553 781 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-236ENST00000556220 PAX4O43316 350 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 PRPF3O43395 683 aaKnown RBP7.53□□□□□ -1.2
ATXN3-236ENST00000556220 TRIM16O95361 564 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 TDP2O95551 362 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 ESRRAP11474 423 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-236ENST00000556220 MYL4P12829 197 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 MAP4P27816 1152 aaKnown RBP7.53□□□□□ -1.2
ATXN3-236ENST00000556220 YWHABP31946 246 aaKnown RBP7.53□□□□□ -1.2
ATXN3-236ENST00000556220 ARL2P36404 184 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 RCAN1P53805 252 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 ARPP19P56211 112 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 IRX4P78413 519 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 EXOSC10Q01780 885 aaKnown RBP7.53□□□□□ -1.2
ATXN3-236ENST00000556220 TWF1Q12792 350 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 PPP2R5CQ13362 524 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 CAPSQ13938 189 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 KARSQ15046 597 aaKnown RBP7.53□□□□□ -1.2
ATXN3-236ENST00000556220 ARHGAP29Q52LW3 1261 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 XKR9Q5GH70 373 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 TMEM196Q5HYL7 178 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 EXOSC6Q5RKV6 272 aaKnown RBP7.53□□□□□ -1.2
ATXN3-236ENST00000556220 TTC22Q5TAA0 569 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 PEAR1Q5VY43 1037 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-236ENST00000556220 CREB3L3Q68CJ9 461 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 TPGS2Q68CL5 300 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 HAUS6Q7Z4H7 955 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 ARID3BQ8IVW6 561 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-236ENST00000556220 ASAP3Q8TDY4 903 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 ZFYVE19Q96K21 471 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 SLITRK6Q9H5Y7 841 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 XPNPEP1Q9NQW7 623 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 POLR3BQ9NW08 1133 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-236ENST00000556220 CACNA2D2Q9NY47 1150 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 MAFFQ9ULX9 164 aa7.53□□□□□ -1.2
ATXN3-236ENST00000556220 CCDC196A0A1B0GTZ2 297 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 SPAARA0A1B0GVQ0 90 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 H7C4K7 107 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 TRDMT1O14717 391 aaKnown RBP7.52□□□□□ -1.21
ATXN3-236ENST00000556220 RECQL4O94761 1208 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 TIAF1O95411 115 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 WNT11O96014 354 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 GLRA2P23416 452 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 RDXP35241 583 aaKnown RBP7.52□□□□□ -1.21
ATXN3-236ENST00000556220 BRCC3P46736 316 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 CLCNKBP51801 687 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 SIM1P81133 766 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-236ENST00000556220 TNK2Q07912 1038 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 SCAPQ12770 1279 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 GRSF1Q12849 480 aaKnown RBP eCLIP7.52□□□□□ -1.21
ATXN3-236ENST00000556220 MRPL58Q14197 206 aaKnown RBP7.52□□□□□ -1.21
ATXN3-236ENST00000556220 NECTIN1Q15223 517 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 EPHA7Q15375 998 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 UPP1Q16831 310 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 MOXD1Q6UVY6 613 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 PIP4P1Q86T03 277 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 KRTAP1-3Q8IUG1 177 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 CHCHD4Q8N4Q1 142 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 GLIS3Q8NEA6 775 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 CCDC148Q8NFR7 591 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 UROC1Q96N76 676 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 LRRC3Q9BY71 257 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 C22orf23Q9BZE7 217 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 LSG1Q9H089 658 aaKnown RBP7.52□□□□□ -1.21
ATXN3-236ENST00000556220 PPP4R2Q9NY27 417 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 OBP2AQ9NY56 170 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 EBF1Q9UH73 591 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 AFF4Q9UHB7 1163 aaKnown RBP7.52□□□□□ -1.21
ATXN3-236ENST00000556220 VAV3Q9UKW4 847 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 ADAMTS20P59510 1910 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 WDR81Q562E7 1941 aa7.52□□□□□ -1.21
ATXN3-236ENST00000556220 KLF18A0A0U1RQI7 1052 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms