RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 PCDHB18PQ96TA0 734 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 SEPT5Q99719 369 aaPredicted RBP10.78□□□□□ -0.68
SYNE2-215ENST00000554997 SLC4A5Q9BY07 1137 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 RHOBTB2Q9BYZ6 727 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 NHEJ1Q9H9Q4 299 aaPredicted RBP10.78□□□□□ -0.68
SYNE2-215ENST00000554997 DMAP1Q9NPF5 467 aaPredicted RBP10.78□□□□□ -0.68
SYNE2-215ENST00000554997 KRT82Q9NSB4 513 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 TMEM30AQ9NV96 361 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 COMMD8Q9NX08 183 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 ADAMTS1Q9UHI8 967 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 ASB3Q9Y575 518 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 CEP83Q9Y592 693 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 NLRC5Q86WI3 1866 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 VWA8A3KMH1 1905 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 HHLA1C9JL84 531 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 F8VP50 259 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 M0QYV0 167 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 DDX3XO00571 662 aaKnown RBP eCLIP10.77□□□□□ -0.69
SYNE2-215ENST00000554997 TNFRSF10BO14763 440 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 C8AP07357 584 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 PLEKP08567 350 aaPredicted RBP10.77□□□□□ -0.69
SYNE2-215ENST00000554997 SRGAP2BP0DMP2 458 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 UNGP13051 313 aaPredicted RBP10.77□□□□□ -0.69
SYNE2-215ENST00000554997 EIF4A3P38919 411 aaKnown RBP10.77□□□□□ -0.69
SYNE2-215ENST00000554997 PLA2G4AP47712 749 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 SNX16P57768 344 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 PLD1Q13393 1074 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 COL19A1Q14993 1142 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 CLEC16AQ2KHT3 1053 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 TDRD12Q587J7 1177 aaKnown RBP10.77□□□□□ -0.69
SYNE2-215ENST00000554997 RAB41Q5JT25 222 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 PPM1LQ5SGD2 360 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 LIN9Q5TKA1 542 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 ACAD10Q6JQN1 1059 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 PPP1R2P3Q6NXS1 205 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 PMF1Q6P1K2 205 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 LLGL2Q6P1M3 1020 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 TMEM110Q86TL2 294 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 PIGZQ86VD9 579 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 LRRC8AQ8IWT6 810 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 CCDC170Q8IYT3 715 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 NUP93Q8N1F7 819 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 VN1R2Q8NFZ6 395 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 OLIG1Q8TAK6 271 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 SLC7A14Q8TBB6 771 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 CASP10Q92851 521 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 GUCD1Q96NT3 240 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 PPP1R9BQ96SB3 815 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 BAG1Q99933 345 aaPredicted RBP10.77□□□□□ -0.69
SYNE2-215ENST00000554997 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.77□□□□□ -0.69
SYNE2-215ENST00000554997 CYLDQ9NQC7 956 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 MAN1C1Q9NR34 630 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 DZANK1Q9NVP4 752 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 ZDHHC7Q9NXF8 308 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 IL37Q9NZH6 218 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 INSL5Q9Y5Q6 135 aa10.77□□□□□ -0.69
SYNE2-215ENST00000554997 A0A087X0T9 212 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 CCDC195A0A1B0GUA6 201 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 TULP2O00295 520 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 GABBR2O75899 941 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 SOAT2O75908 522 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 LRG1P02750 347 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 POU2F2P09086 479 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 FAM228BP0C875 321 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 CSH1P0DML2 217 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 CSH2P0DML3 217 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 HOXB8P17481 243 aaPredicted RBP10.76□□□□□ -0.69
SYNE2-215ENST00000554997 ATF6P18850 670 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 ACADSBP45954 432 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 GPR15P49685 360 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 NOMO3P69849 1222 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 RBM10P98175 930 aaKnown RBP10.76□□□□□ -0.69
SYNE2-215ENST00000554997 CCDC173Q0VFZ6 552 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 TWF1Q12792 350 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 SLC18A3Q16572 532 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 DNAJB7Q7Z6W7 309 aaPredicted RBP10.76□□□□□ -0.69
SYNE2-215ENST00000554997 ITIH5Q86UX2 942 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 ERICH1Q86X53 443 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 PASD1Q8IV76 773 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 CMASQ8NFW8 434 aaPredicted RBP10.76□□□□□ -0.69
SYNE2-215ENST00000554997 CPA5Q8WXQ8 436 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 MYLIPQ8WY64 445 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 PPP1R13BQ96KQ4 1090 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 ZNF512Q96ME7 567 aaPredicted RBP10.76□□□□□ -0.69
SYNE2-215ENST00000554997 NOX5Q96PH1 765 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 PRKD2Q9BZL6 878 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 SEPT11Q9NVA2 429 aaKnown RBP10.76□□□□□ -0.69
SYNE2-215ENST00000554997 EHD2Q9NZN4 543 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 CYTH4Q9UIA0 394 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 YIPF1Q9Y548 306 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 USP3Q9Y6I4 520 aa10.76□□□□□ -0.69
SYNE2-215ENST00000554997 CDH23Q9H251 3354 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.75□□□□□ -0.69
SYNE2-215ENST00000554997 FAM92AA1XBS5 289 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 SLC38A8A6NNN8 435 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 LINC01565O15544 149 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 AKR1B10O60218 316 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 XYLBO75191 536 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 RTN2O75298 545 aa10.75□□□□□ -0.69
SYNE2-215ENST00000554997 RTN3O95197 1032 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms