RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 CRTAC1Q9NQ79 661 aa13.47□□□□□ -0.25
LETMD1-222ENST00000550274 INTS13Q9NVM9 706 aa13.47□□□□□ -0.25
LETMD1-222ENST00000550274 EBF1Q9UH73 591 aa13.47□□□□□ -0.25
LETMD1-222ENST00000550274 ARHGAP26Q9UNA1 814 aa13.47□□□□□ -0.25
LETMD1-222ENST00000550274 INVSQ9Y283 1065 aa13.47□□□□□ -0.25
LETMD1-222ENST00000550274 PCDHB13Q9Y5F0 798 aa13.47□□□□□ -0.25
LETMD1-222ENST00000550274 CACNA1GO43497 2377 aa13.46□□□□□ -0.25
LETMD1-222ENST00000550274 ZFYVE26Q68DK2 2539 aa13.46□□□□□ -0.25
LETMD1-222ENST00000550274 BCLAF3A2AJT9 711 aaKnown RBP13.46□□□□□ -0.25
LETMD1-222ENST00000550274 K7EQS6 105 aa13.46□□□□□ -0.25
LETMD1-222ENST00000550274 BDNFP23560 247 aa13.46□□□□□ -0.25
LETMD1-222ENST00000550274 DGKEP52429 567 aa13.46□□□□□ -0.25
LETMD1-222ENST00000550274 SHC2P98077 582 aa13.46□□□□□ -0.25
LETMD1-222ENST00000550274 CEBPZQ03701 1054 aaKnown RBP13.46□□□□□ -0.25
LETMD1-222ENST00000550274 RESTQ13127 1097 aa13.46□□□□□ -0.25
LETMD1-222ENST00000550274 ALCAMQ13740 583 aa13.46□□□□□ -0.25
LETMD1-222ENST00000550274 ELF2Q15723 593 aa13.46□□□□□ -0.25
LETMD1-222ENST00000550274 PSAPL1Q6NUJ1 521 aa13.46□□□□□ -0.25
LETMD1-222ENST00000550274 C4orf50Q6ZRC1 276 aa13.46□□□□□ -0.25
LETMD1-222ENST00000550274 FSIP1Q8NA03 581 aa13.46□□□□□ -0.25
LETMD1-222ENST00000550274 USP33Q8TEY7 942 aa13.46□□□□□ -0.25
LETMD1-222ENST00000550274 EXOC4Q96A65 974 aa13.46□□□□□ -0.25
LETMD1-222ENST00000550274 HPDLQ96IR7 371 aa13.46□□□□□ -0.25
LETMD1-222ENST00000550274 SPATA17Q96L03 361 aa13.46□□□□□ -0.25
LETMD1-222ENST00000550274 EDEM2Q9BV94 578 aa13.46□□□□□ -0.25
LETMD1-222ENST00000550274 PANK2Q9BZ23 570 aa13.46□□□□□ -0.25
LETMD1-222ENST00000550274 TPSD1Q9BZJ3 242 aa13.46□□□□□ -0.25
LETMD1-222ENST00000550274 PANK4Q9NVE7 773 aa13.46□□□□□ -0.25
LETMD1-222ENST00000550274 MAGEC2Q9UBF1 373 aaPredicted RBP13.46□□□□□ -0.25
LETMD1-222ENST00000550274 NME7Q9Y5B8 376 aa13.46□□□□□ -0.25
LETMD1-222ENST00000550274 CACNA1EQ15878 2313 aa13.46□□□□□ -0.26
LETMD1-222ENST00000550274 LNP1A1A4G5 178 aa13.45□□□□□ -0.26
LETMD1-222ENST00000550274 RHOBTB1O94844 696 aa13.45□□□□□ -0.26
LETMD1-222ENST00000550274 NFATC1O95644 943 aa13.45□□□□□ -0.26
LETMD1-222ENST00000550274 CAVIN2O95810 425 aa13.45□□□□□ -0.26
LETMD1-222ENST00000550274 BCKDHBP21953 392 aa13.45□□□□□ -0.26
LETMD1-222ENST00000550274 GBP1P32455 592 aa13.45□□□□□ -0.26
LETMD1-222ENST00000550274 TXLNAP40222 546 aa13.45□□□□□ -0.26
LETMD1-222ENST00000550274 STAT6P42226 847 aa13.45□□□□□ -0.26
LETMD1-222ENST00000550274 SEC13P55735 322 aa13.45□□□□□ -0.26
LETMD1-222ENST00000550274 MYO1EQ12965 1108 aa13.45□□□□□ -0.26
LETMD1-222ENST00000550274 CUL4AQ13619 759 aa13.45□□□□□ -0.26
LETMD1-222ENST00000550274 C2orf27AQ580R0 203 aa13.45□□□□□ -0.26
LETMD1-222ENST00000550274 PMS2CLQ68D20 193 aa13.45□□□□□ -0.26
LETMD1-222ENST00000550274 CCDC73Q6ZRK6 1079 aa13.45□□□□□ -0.26
LETMD1-222ENST00000550274 DPH6Q7L8W6 267 aa13.45□□□□□ -0.26
LETMD1-222ENST00000550274 RASSF3Q86WH2 238 aa13.45□□□□□ -0.26
LETMD1-222ENST00000550274 CBWD2Q8IUF1 395 aa13.45□□□□□ -0.26
LETMD1-222ENST00000550274 SFTPA1Q8IWL2 248 aa13.45□□□□□ -0.26
LETMD1-222ENST00000550274 TSTD1Q8NFU3 115 aa13.45□□□□□ -0.26
LETMD1-222ENST00000550274 HPS3Q969F9 1004 aa13.45□□□□□ -0.26
LETMD1-222ENST00000550274 PCED1BQ96HM7 432 aa13.45□□□□□ -0.26
LETMD1-222ENST00000550274 ANKRD36BP1Q96IX9 119 aa13.45□□□□□ -0.26
LETMD1-222ENST00000550274 CDH9Q9ULB4 789 aa13.45□□□□□ -0.26
LETMD1-222ENST00000550274 DSPP15924 2871 aaKnown RBP13.44□□□□□ -0.26
LETMD1-222ENST00000550274 C4orf47A7E2U8 309 aa13.44□□□□□ -0.26
LETMD1-222ENST00000550274 LEFTY2O00292 366 aa13.44□□□□□ -0.26
LETMD1-222ENST00000550274 SCAMP3O14828 347 aaKnown RBP13.44□□□□□ -0.26
LETMD1-222ENST00000550274 GIPC1O14908 333 aa13.44□□□□□ -0.26
LETMD1-222ENST00000550274 CYP17A1P05093 508 aa13.44□□□□□ -0.26
LETMD1-222ENST00000550274 PDGFRBP09619 1106 aa13.44□□□□□ -0.26
LETMD1-222ENST00000550274 HNRNPLP14866 589 aaKnown RBP eCLIP13.44□□□□□ -0.26
LETMD1-222ENST00000550274 WARSP23381 471 aaKnown RBP13.44□□□□□ -0.26
LETMD1-222ENST00000550274 HOXD13P35453 343 aa13.44□□□□□ -0.26
LETMD1-222ENST00000550274 GRIK1P39086 918 aa13.44□□□□□ -0.26
LETMD1-222ENST00000550274 CYP27A1Q02318 531 aa13.44□□□□□ -0.26
LETMD1-222ENST00000550274 MESP2Q0VG99 397 aa13.44□□□□□ -0.26
LETMD1-222ENST00000550274 NR1H3Q13133 447 aa13.44□□□□□ -0.26
LETMD1-222ENST00000550274 ANO7Q6IWH7 933 aa13.44□□□□□ -0.26
LETMD1-222ENST00000550274 VSTM1Q6UX27 236 aa13.44□□□□□ -0.26
LETMD1-222ENST00000550274 DENND5BQ6ZUT9 1274 aa13.44□□□□□ -0.26
LETMD1-222ENST00000550274 FILIP1Q7Z7B0 1213 aa13.44□□□□□ -0.26
LETMD1-222ENST00000550274 CCDC33Q8N5R6 958 aa13.44□□□□□ -0.26
LETMD1-222ENST00000550274 MDGA1Q8NFP4 955 aa13.44□□□□□ -0.26
LETMD1-222ENST00000550274 USP28Q96RU2 1077 aa13.44□□□□□ -0.26
LETMD1-222ENST00000550274 MRPL45Q9BRJ2 306 aaKnown RBP13.44□□□□□ -0.26
LETMD1-222ENST00000550274 TTLL2Q9BWV7 592 aa13.44□□□□□ -0.26
LETMD1-222ENST00000550274 RNF38Q9H0F5 515 aa13.44□□□□□ -0.26
LETMD1-222ENST00000550274 TMEM30AQ9NV96 361 aa13.44□□□□□ -0.26
LETMD1-222ENST00000550274 DMXL2Q8TDJ6 3036 aa13.43□□□□□ -0.26
LETMD1-222ENST00000550274 ZNF840PA6NDX5 716 aa13.43□□□□□ -0.26
LETMD1-222ENST00000550274 ZNF233A6NK53 670 aa13.43□□□□□ -0.26
LETMD1-222ENST00000550274 PATE3B3GLJ2 98 aa13.43□□□□□ -0.26
LETMD1-222ENST00000550274 F8VP50 259 aa13.43□□□□□ -0.26
LETMD1-222ENST00000550274 OLFM2O95897 454 aa13.43□□□□□ -0.26
LETMD1-222ENST00000550274 TNNC2P02585 160 aa13.43□□□□□ -0.26
LETMD1-222ENST00000550274 CHRM1P11229 460 aaPredicted RBP13.43□□□□□ -0.26
LETMD1-222ENST00000550274 PDE6CP51160 858 aa13.43□□□□□ -0.26
LETMD1-222ENST00000550274 NOVA1P51513 510 aaKnown RBP13.43□□□□□ -0.26
LETMD1-222ENST00000550274 CACNA2D1P54289 1103 aa13.43□□□□□ -0.26
LETMD1-222ENST00000550274 SLC7A9P82251 487 aa13.43□□□□□ -0.26
LETMD1-222ENST00000550274 DUOXA2Q1HG44 320 aa13.43□□□□□ -0.26
LETMD1-222ENST00000550274 USP39Q53GS9 565 aaKnown RBP13.43□□□□□ -0.26
LETMD1-222ENST00000550274 MDH1BQ5I0G3 518 aa13.43□□□□□ -0.26
LETMD1-222ENST00000550274 TMEM92Q6UXU6 159 aa13.43□□□□□ -0.26
LETMD1-222ENST00000550274 PDILTQ8N807 584 aa13.43□□□□□ -0.26
LETMD1-222ENST00000550274 MYCBPAPQ8TBZ2 947 aa13.43□□□□□ -0.26
LETMD1-222ENST00000550274 CNOT6LQ96LI5 555 aaKnown RBP13.43□□□□□ -0.26
LETMD1-222ENST00000550274 SMPD4Q9NXE4 827 aa13.43□□□□□ -0.26
LETMD1-222ENST00000550274 HSPBP1Q9NZL4 362 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms