RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 PCED1BQ96HM7 432 aa13.02□□□□□ -0.33
RAB5B-204ENST00000548068 LPIN3Q9BQK8 851 aa13.02□□□□□ -0.33
RAB5B-204ENST00000548068 RTP3Q9BQQ7 232 aa13.02□□□□□ -0.33
RAB5B-204ENST00000548068 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.02□□□□□ -0.335e-10■■■□□ 15.3
RAB5B-204ENST00000548068 TRIM7Q9C029 511 aa13.02□□□□□ -0.33
RAB5B-204ENST00000548068 ASNSD1Q9NWL6 643 aa13.02□□□□□ -0.33
RAB5B-204ENST00000548068 NLRC5Q86WI3 1866 aa13.02□□□□□ -0.33
RAB5B-204ENST00000548068 GOLGA6L10A0A0M3HER8 536 aa13.01□□□□□ -0.33
RAB5B-204ENST00000548068 MYBPHLA2RUH7 354 aa13.01□□□□□ -0.33
RAB5B-204ENST00000548068 RNF8O76064 485 aa13.01□□□□□ -0.33
RAB5B-204ENST00000548068 UPP2O95045 317 aa13.01□□□□□ -0.33
RAB5B-204ENST00000548068 GALTP07902 379 aa13.01□□□□□ -0.33
RAB5B-204ENST00000548068 GPD1P21695 349 aa13.01□□□□□ -0.33
RAB5B-204ENST00000548068 RFC1P35251 1148 aaPredicted RBP13.01□□□□□ -0.33
RAB5B-204ENST00000548068 SSR1P43307 286 aaKnown RBP13.01□□□□□ -0.33
RAB5B-204ENST00000548068 ALDH7A1P49419 539 aaKnown RBP13.01□□□□□ -0.33
RAB5B-204ENST00000548068 PEX5P50542 639 aa13.01□□□□□ -0.33
RAB5B-204ENST00000548068 WDR5P61964 334 aaKnown RBP13.01□□□□□ -0.33
RAB5B-204ENST00000548068 PPP2R5EQ16537 467 aa13.01□□□□□ -0.33
RAB5B-204ENST00000548068 NFE2Q16621 373 aaPredicted RBP13.01□□□□□ -0.33
RAB5B-204ENST00000548068 HADHQ16836 314 aaKnown RBP13.01□□□□□ -0.33
RAB5B-204ENST00000548068 EFHC1Q5JVL4 640 aa13.01□□□□□ -0.33
RAB5B-204ENST00000548068 KIAA0319Q5VV43 1072 aa13.01□□□□□ -0.33
RAB5B-204ENST00000548068 FUT10Q6P4F1 479 aa13.01□□□□□ -0.33
RAB5B-204ENST00000548068 OLFML1Q6UWY5 402 aa13.01□□□□□ -0.33
RAB5B-204ENST00000548068 CLEC20AQ6ZU45 233 aa13.01□□□□□ -0.33
RAB5B-204ENST00000548068 SLC26A9Q7LBE3 791 aa13.01□□□□□ -0.33
RAB5B-204ENST00000548068 SPATA2LQ8IUW3 424 aaPredicted RBP13.01□□□□□ -0.33
RAB5B-204ENST00000548068 CMTR2Q8IYT2 770 aaKnown RBP13.01□□□□□ -0.33
RAB5B-204ENST00000548068 SIX6OS1Q8N1H7 587 aa13.01□□□□□ -0.33
RAB5B-204ENST00000548068 MAIP1Q8WWC4 291 aa13.01□□□□□ -0.33
RAB5B-204ENST00000548068 RNPC3Q96LT9 517 aaKnown RBP13.01□□□□□ -0.33
RAB5B-204ENST00000548068 CNPY3Q9BT09 278 aa13.01□□□□□ -0.33
RAB5B-204ENST00000548068 LRRC4Q9HBW1 653 aa13.01□□□□□ -0.33
RAB5B-204ENST00000548068 PNPLA8Q9NP80 782 aa13.01□□□□□ -0.33
RAB5B-204ENST00000548068 DMAP1Q9NPF5 467 aaPredicted RBP13.01□□□□□ -0.33
RAB5B-204ENST00000548068 DDX56Q9NY93 547 aaKnown RBP13.01□□□□□ -0.33
RAB5B-204ENST00000548068 TJP2Q9UDY2 1190 aa13.01□□□□□ -0.33
RAB5B-204ENST00000548068 ALPK3Q96L96 1907 aa13.01□□□□□ -0.33
RAB5B-204ENST00000548068 F8W810 466 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 CCDC188H7C350 402 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 TULP2O00295 520 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 PDE2AO00408 941 aaPredicted RBP13□□□□□ -0.33
RAB5B-204ENST00000548068 CLDN5O00501 218 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 DPYSL4O14531 572 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 PAPSS1O43252 624 aaPredicted RBP13□□□□□ -0.33
RAB5B-204ENST00000548068 GJB6O95452 261 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 TUBBP07437 444 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 GLI1P08151 1106 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 KRT7P08729 469 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 LCP1P13796 627 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 LAG3P18627 525 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 FGFR3P22607 806 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 ZNF143P52747 638 aaPredicted RBP13□□□□□ -0.33
RAB5B-204ENST00000548068 BCAR1P56945 870 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 FPGSQ05932 587 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 SMARCB1Q12824 385 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 ODF2Q5BJF6 829 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 VARS2Q5ST30 1063 aaKnown RBP13□□□□□ -0.33
RAB5B-204ENST00000548068 FAM171A1Q5VUB5 890 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 CC2D1AQ6P1N0 951 aaPredicted RBP13□□□□□ -0.33
RAB5B-204ENST00000548068 PAQR9Q6ZVX9 377 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 ANKS3Q6ZW76 656 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 POLNQ7Z5Q5 900 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 PIGZQ86VD9 579 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 KATNAL2Q8IYT4 538 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 MMGT1Q8N4V1 131 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 GPR161Q8N6U8 529 aaKnown RBP13□□□□□ -0.33
RAB5B-204ENST00000548068 SPATA4Q8NEY3 305 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 OR10T2Q8NGX3 314 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 JOSD2Q8TAC2 188 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 ALG3Q92685 438 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 KRT35Q92764 455 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 VWCEQ96DN2 955 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 FUBP3Q96I24 572 aaKnown RBP eCLIP13□□□□□ -0.33
RAB5B-204ENST00000548068 RBM41Q96IZ5 413 aaKnown RBP13□□□□□ -0.33
RAB5B-204ENST00000548068 PKMYT1Q99640 499 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 ZCWPW1Q9H0M4 648 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 CSNK1G1Q9HCP0 422 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 MARCH5Q9NX47 278 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 TMEM59LQ9UK28 342 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 USTQ9Y2C2 406 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 VWA8A3KMH1 1905 aa13□□□□□ -0.33
RAB5B-204ENST00000548068 COL4A6Q14031 1691 aa12.99□□□□□ -0.33
RAB5B-204ENST00000548068 C2CD4BA6NLJ0 364 aa12.99□□□□□ -0.33
RAB5B-204ENST00000548068 HSF2BPO75031 334 aa12.99□□□□□ -0.33
RAB5B-204ENST00000548068 PDGFRAP16234 1089 aa12.99□□□□□ -0.33
RAB5B-204ENST00000548068 EN2P19622 333 aaPredicted RBP12.99□□□□□ -0.33
RAB5B-204ENST00000548068 ITGB8P26012 769 aa12.99□□□□□ -0.33
RAB5B-204ENST00000548068 SDC4P31431 198 aa12.99□□□□□ -0.33
RAB5B-204ENST00000548068 PCK1P35558 622 aa12.99□□□□□ -0.33
RAB5B-204ENST00000548068 PTPN9P43378 593 aa12.99□□□□□ -0.33
RAB5B-204ENST00000548068 MAP3K7CLP57077 242 aa12.99□□□□□ -0.33
RAB5B-204ENST00000548068 ZNF252P-AS1Q0IIN9 211 aa12.99□□□□□ -0.33
RAB5B-204ENST00000548068 ADIGQ0VDE8 80 aa12.99□□□□□ -0.33
RAB5B-204ENST00000548068 LONRF2Q1L5Z9 754 aa12.99□□□□□ -0.33
RAB5B-204ENST00000548068 CTXN3Q4LDR2 81 aa12.99□□□□□ -0.33
RAB5B-204ENST00000548068 SPOUT1Q5T280 376 aaKnown RBP12.99□□□□□ -0.33
RAB5B-204ENST00000548068 DCAF12L1Q5VU92 463 aa12.99□□□□□ -0.33
RAB5B-204ENST00000548068 PSRC1Q6PGN9 363 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms