RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 AKAP10O43572 662 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 CYTH3O43739 400 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 PTPN11Q06124 597 aaPredicted RBP13.29□□□□□ -0.28
CHD4-211ENST00000544484 ZNF177Q13360 481 aaPredicted RBP13.29□□□□□ -0.28
CHD4-211ENST00000544484 FIGNQ5HY92 759 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 SLFN11Q7Z7L1 901 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 TMEM176AQ96HP8 235 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 CHCHD3Q9NX63 227 aaKnown RBP13.29□□□□□ -0.28
CHD4-211ENST00000544484 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.29□□□□□ -0.28
CHD4-211ENST00000544484 CRLS1Q9UJA2 301 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 CDYLQ9Y232 598 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 IQGAP1P46940 1657 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 PREX1Q8TCU6 1659 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 PLA2G4AP47712 749 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 RGS4P49798 205 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 DAB2P98082 770 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 FBXO25Q8TCJ0 367 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 KIAA1683Q9H0B3 1180 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 PABPC3Q9H361 631 aaKnown RBP13.29□□□□□ -0.28
CHD4-211ENST00000544484 USP18Q9UMW8 372 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 V9GYQ6 96 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 SALL1Q9NSC2 1324 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 EML1O00423 815 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 ATP6V1E1P36543 226 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 EFEMP1Q12805 493 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 GRIK5Q16478 980 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 OTOP1Q7RTM1 612 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 WDR49Q8IV35 697 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 DNAJB3Q8WWF6 145 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 NWD1Q149M9 1564 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 PDHXO00330 501 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 POMCP01189 267 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 LAMB3Q13751 1172 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 PTK6Q13882 451 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 ZC3H12BQ5HYM0 836 aaKnown RBP13.29□□□□□ -0.28
CHD4-211ENST00000544484 ICE2Q659A1 982 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 SRLQ86TD4 932 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 PRPF39Q86UA1 669 aaKnown RBP13.29□□□□□ -0.28
CHD4-211ENST00000544484 LRRC6Q86X45 466 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 P2RX7Q99572 595 aaKnown RBP13.29□□□□□ -0.28
CHD4-211ENST00000544484 TEX12Q9BXU0 123 aa13.29□□□□□ -0.28
CHD4-211ENST00000544484 SMAPO00193 183 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 TRIM66O15016 1216 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 ANXA9O76027 345 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 SERPINB4P48594 390 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 SLC11A2P49281 568 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 BCAT1P54687 386 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 DDR1Q08345 913 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 CTXN3Q4LDR2 81 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 ILDR1Q86SU0 546 aaPredicted RBP13.28□□□□□ -0.28
CHD4-211ENST00000544484 CD302Q8IX05 232 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 TRIM45Q9H8W5 580 aaPredicted RBP13.28□□□□□ -0.28
CHD4-211ENST00000544484 PPCSQ9HAB8 311 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 OLFML3Q9NRN5 406 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 NSMCE4AQ9NXX6 385 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 TRAF3IP3Q9Y228 551 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 BCL9O00512 1426 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 VIL1P09327 827 aaKnown RBP13.28□□□□□ -0.28
CHD4-211ENST00000544484 GZMAP12544 262 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 ACAT1P24752 427 aaKnown RBP13.28□□□□□ -0.28
CHD4-211ENST00000544484 CNGA3Q16281 694 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 DACT2Q5SW24 774 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 GLIS2Q9BZE0 524 aaPredicted RBP13.28□□□□□ -0.28
CHD4-211ENST00000544484 UBP1Q9NZI7 540 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 TEKT2Q9UIF3 430 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 AP4E1Q9UPM8 1137 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 ITM2BQ9Y287 266 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 PKN3Q6P5Z2 889 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 YIPF2Q9BWQ6 316 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 ADNPQ9H2P0 1102 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 HPS4Q9NQG7 708 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 MRPL42Q9Y6G3 142 aaKnown RBP13.28□□□□□ -0.28
CHD4-211ENST00000544484 RIMS1Q86UR5 1692 aaKnown RBP13.28□□□□□ -0.28
CHD4-211ENST00000544484 MST1RQ04912 1400 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 CKMP06732 381 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 SLURP2P0DP57 97 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 RALBP11234 206 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 OCA2Q04671 838 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 C11orf63Q6NUN7 778 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 ARHGEF19Q8IW93 802 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 GLRBP48167 497 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 KCNK18Q7Z418 384 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 LRRC34Q8IZ02 419 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 KIAA1257Q9ULG3 409 aa13.28□□□□□ -0.28
CHD4-211ENST00000544484 CFAP99D6REC4 459 aa13.27□□□□□ -0.28
CHD4-211ENST00000544484 SKAP2O75563 359 aaPredicted RBP13.27□□□□□ -0.28
CHD4-211ENST00000544484 ASS1P00966 412 aaKnown RBP13.27□□□□□ -0.28
CHD4-211ENST00000544484 PLIN5Q00G26 463 aa13.27□□□□□ -0.28
CHD4-211ENST00000544484 INPP5AQ14642 412 aa13.27□□□□□ -0.28
CHD4-211ENST00000544484 MTMR8Q96EF0 704 aa13.27□□□□□ -0.28
CHD4-211ENST00000544484 ZBTB45Q96K62 511 aaPredicted RBP13.27□□□□□ -0.28
CHD4-211ENST00000544484 CEP41Q9BYV8 373 aa13.27□□□□□ -0.28
CHD4-211ENST00000544484 RNF19AQ9NV58 838 aa13.27□□□□□ -0.28
CHD4-211ENST00000544484 PROSCO94903 275 aa13.27□□□□□ -0.28
CHD4-211ENST00000544484 MBL2P11226 248 aaPredicted RBP13.27□□□□□ -0.28
CHD4-211ENST00000544484 FDFT1P37268 417 aa13.27□□□□□ -0.28
CHD4-211ENST00000544484 PTGISQ16647 500 aa13.27□□□□□ -0.28
CHD4-211ENST00000544484 SPOCD1Q6ZMY3 1216 aa13.27□□□□□ -0.28
CHD4-211ENST00000544484 LINC00523Q86TU6 105 aa13.27□□□□□ -0.28
CHD4-211ENST00000544484 ARHGAP18Q8N392 663 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms