RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 CYP1A1P04798 512 aaPredicted RBP24.41■■□□□ 1.5
HOMER3-205ENST00000542541 C8AP07357 584 aa24.41■■□□□ 1.5
HOMER3-205ENST00000542541 PLA2G4AP47712 749 aa24.41■■□□□ 1.5
HOMER3-205ENST00000542541 SNX16P57768 344 aa24.41■■□□□ 1.5
HOMER3-205ENST00000542541 DEFB123Q8N688 67 aa24.41■■□□□ 1.5
HOMER3-205ENST00000542541 EFHBQ8N7U6 833 aa24.41■■□□□ 1.5
HOMER3-205ENST00000542541 CCDC112Q8NEF3 446 aa24.41■■□□□ 1.5
HOMER3-205ENST00000542541 SLC7A14Q8TBB6 771 aa24.41■■□□□ 1.5
HOMER3-205ENST00000542541 CASP10Q92851 521 aa24.41■■□□□ 1.5
HOMER3-205ENST00000542541 SPATA17Q96L03 361 aa24.41■■□□□ 1.5
HOMER3-205ENST00000542541 MAN1C1Q9NR34 630 aa24.41■■□□□ 1.5
HOMER3-205ENST00000542541 YIPF1Q9Y548 306 aa24.41■■□□□ 1.5
HOMER3-205ENST00000542541 SPDYE4A6NLX3 237 aa24.4■■□□□ 1.5
HOMER3-205ENST00000542541 AKR1B10O60218 316 aa24.4■■□□□ 1.5
HOMER3-205ENST00000542541 BEST1O76090 585 aa24.4■■□□□ 1.5
HOMER3-205ENST00000542541 CACNA2D1P54289 1103 aa24.4■■□□□ 1.5
HOMER3-205ENST00000542541 HYAL1Q12794 435 aa24.4■■□□□ 1.5
HOMER3-205ENST00000542541 DDR2Q16832 855 aa24.4■■□□□ 1.5
HOMER3-205ENST00000542541 PPM1LQ5SGD2 360 aa24.4■■□□□ 1.5
HOMER3-205ENST00000542541 LLGL2Q6P1M3 1020 aa24.4■■□□□ 1.5
HOMER3-205ENST00000542541 PIGZQ86VD9 579 aa24.4■■□□□ 1.5
HOMER3-205ENST00000542541 LRRC8AQ8IWT6 810 aa24.4■■□□□ 1.5
HOMER3-205ENST00000542541 CCDC170Q8IYT3 715 aa24.4■■□□□ 1.5
HOMER3-205ENST00000542541 MSANTD4Q8NCY6 345 aa24.4■■□□□ 1.5
HOMER3-205ENST00000542541 ZMIZ2Q8NF64 920 aa24.4■■□□□ 1.5
HOMER3-205ENST00000542541 HSFY1Q96LI6 401 aa24.4■■□□□ 1.5
HOMER3-205ENST00000542541 PCDHB18PQ96TA0 734 aa24.4■■□□□ 1.5
HOMER3-205ENST00000542541 ZMYND10O75800 440 aa24.39■■□□□ 1.5
HOMER3-205ENST00000542541 LRG1P02750 347 aa24.39■■□□□ 1.5
HOMER3-205ENST00000542541 GZMAP12544 262 aa24.39■■□□□ 1.5
HOMER3-205ENST00000542541 EPHB3P54753 998 aa24.39■■□□□ 1.5
HOMER3-205ENST00000542541 VEPH1Q14D04 833 aa24.39■■□□□ 1.5
HOMER3-205ENST00000542541 CLEC16AQ2KHT3 1053 aa24.39■■□□□ 1.5
HOMER3-205ENST00000542541 Q7L0L9 218 aa24.39■■□□□ 1.5
HOMER3-205ENST00000542541 WDTC1Q8N5D0 677 aa24.39■■□□□ 1.5
HOMER3-205ENST00000542541 SLC30A5Q8TAD4 765 aa24.39■■□□□ 1.5
HOMER3-205ENST00000542541 KCTD13Q8WZ19 329 aa24.39■■□□□ 1.5
HOMER3-205ENST00000542541 CDX2Q99626 313 aaPredicted RBP24.39■■□□□ 1.5
HOMER3-205ENST00000542541 TMEM30AQ9NV96 361 aa24.39■■□□□ 1.5
HOMER3-205ENST00000542541 DZANK1Q9NVP4 752 aa24.39■■□□□ 1.5
HOMER3-205ENST00000542541 DDX3XO00571 662 aaKnown RBP eCLIP24.39■■□□□ 1.49
HOMER3-205ENST00000542541 HOXA9P31269 272 aa24.39■■□□□ 1.49
HOMER3-205ENST00000542541 NOMO3P69849 1222 aa24.39■■□□□ 1.49
HOMER3-205ENST00000542541 KCNC3Q14003 757 aa24.39■■□□□ 1.49
HOMER3-205ENST00000542541 NAA35Q5VZE5 725 aa24.39■■□□□ 1.49
HOMER3-205ENST00000542541 TMEM184AQ6ZMB5 413 aa24.39■■□□□ 1.49
HOMER3-205ENST00000542541 C1orf131Q8NDD1 294 aaKnown RBP24.39■■□□□ 1.49
HOMER3-205ENST00000542541 MIS12Q9H081 205 aa24.39■■□□□ 1.49
HOMER3-205ENST00000542541 CYLDQ9NQC7 956 aa24.39■■□□□ 1.49
HOMER3-205ENST00000542541 ST7Q9NRC1 585 aa24.39■■□□□ 1.49
HOMER3-205ENST00000542541 ZDHHC7Q9NXF8 308 aa24.39■■□□□ 1.49
HOMER3-205ENST00000542541 EHD2Q9NZN4 543 aa24.39■■□□□ 1.49
HOMER3-205ENST00000542541 ASB3Q9Y575 518 aa24.39■■□□□ 1.49
HOMER3-205ENST00000542541 REV3LO60673 3130 aa24.38■■□□□ 1.49
HOMER3-205ENST00000542541 SOAT2O75908 522 aa24.38■■□□□ 1.49
HOMER3-205ENST00000542541 HNRNPA1P09651 372 aaKnown RBP eCLIP24.38■■□□□ 1.49
HOMER3-205ENST00000542541 UNGP13051 313 aaPredicted RBP24.38■■□□□ 1.49
HOMER3-205ENST00000542541 CYLC1P35663 651 aaPredicted RBP24.38■■□□□ 1.49
HOMER3-205ENST00000542541 ACADSBP45954 432 aa24.38■■□□□ 1.49
HOMER3-205ENST00000542541 NSFP46459 744 aaKnown RBP24.38■■□□□ 1.49
HOMER3-205ENST00000542541 TWF1Q12792 350 aa24.38■■□□□ 1.49
HOMER3-205ENST00000542541 TAF12Q16514 161 aa24.38■■□□□ 1.49
HOMER3-205ENST00000542541 SLC18A3Q16572 532 aa24.38■■□□□ 1.49
HOMER3-205ENST00000542541 ASTE1Q2TB18 679 aaPredicted RBP24.38■■□□□ 1.49
HOMER3-205ENST00000542541 PMF1Q6P1K2 205 aa24.38■■□□□ 1.49
HOMER3-205ENST00000542541 ITIH5Q86UX2 942 aa24.38■■□□□ 1.49
HOMER3-205ENST00000542541 NUP93Q8N1F7 819 aa24.38■■□□□ 1.49
HOMER3-205ENST00000542541 ELMOD1Q8N336 334 aa24.38■■□□□ 1.49
HOMER3-205ENST00000542541 CPA5Q8WXQ8 436 aa24.38■■□□□ 1.49
HOMER3-205ENST00000542541 LRRC4Q9HBW1 653 aa24.38■■□□□ 1.49
HOMER3-205ENST00000542541 A0A087X0T9 212 aa24.37■■□□□ 1.49
HOMER3-205ENST00000542541 FAM228BP0C875 321 aa24.37■■□□□ 1.49
HOMER3-205ENST00000542541 ATF6P18850 670 aa24.37■■□□□ 1.49
HOMER3-205ENST00000542541 GTF2F1P35269 517 aaKnown RBP eCLIP24.37■■□□□ 1.49
HOMER3-205ENST00000542541 GPR15P49685 360 aa24.37■■□□□ 1.49
HOMER3-205ENST00000542541 KIF11P52732 1056 aa24.37■■□□□ 1.49
HOMER3-205ENST00000542541 CENPCQ03188 943 aa24.37■■□□□ 1.49
HOMER3-205ENST00000542541 PDCLQ13371 301 aa24.37■■□□□ 1.49
HOMER3-205ENST00000542541 DENND5BQ6ZUT9 1274 aa24.37■■□□□ 1.49
HOMER3-205ENST00000542541 ERICH1Q86X53 443 aa24.37■■□□□ 1.49
HOMER3-205ENST00000542541 IPO4Q8TEX9 1081 aaKnown RBP24.37■■□□□ 1.49
HOMER3-205ENST00000542541 PPP1R13BQ96KQ4 1090 aa24.37■■□□□ 1.49
HOMER3-205ENST00000542541 SLC4A5Q9BY07 1137 aa24.37■■□□□ 1.49
HOMER3-205ENST00000542541 SYNCQ9H7C4 482 aa24.37■■□□□ 1.49
HOMER3-205ENST00000542541 COMMD8Q9NX08 183 aa24.37■■□□□ 1.49
HOMER3-205ENST00000542541 HHLA1C9JL84 531 aa24.36■■□□□ 1.49
HOMER3-205ENST00000542541 TULP2O00295 520 aa24.36■■□□□ 1.49
HOMER3-205ENST00000542541 RTN3O95197 1032 aaPredicted RBP24.36■■□□□ 1.49
HOMER3-205ENST00000542541 CSH1P0DML2 217 aa24.36■■□□□ 1.49
HOMER3-205ENST00000542541 CSH2P0DML3 217 aa24.36■■□□□ 1.49
HOMER3-205ENST00000542541 ADAM15Q13444 863 aa24.36■■□□□ 1.49
HOMER3-205ENST00000542541 ACAD10Q6JQN1 1059 aa24.36■■□□□ 1.49
HOMER3-205ENST00000542541 TMEM139Q8IV31 216 aa24.36■■□□□ 1.49
HOMER3-205ENST00000542541 OLIG1Q8TAK6 271 aa24.36■■□□□ 1.49
HOMER3-205ENST00000542541 MYLIPQ8WY64 445 aa24.36■■□□□ 1.49
HOMER3-205ENST00000542541 RTN2O75298 545 aa24.35■■□□□ 1.49
HOMER3-205ENST00000542541 RPL34P49207 117 aaKnown RBP24.35■■□□□ 1.49
HOMER3-205ENST00000542541 RGS7P49802 495 aa24.35■■□□□ 1.49
HOMER3-205ENST00000542541 RAB41Q5JT25 222 aa24.35■■□□□ 1.49
HOMER3-205ENST00000542541 SDHAF4Q5VUM1 108 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms