RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 CRTAC1Q9NQ79 661 aa22.8■■□□□ 1.24
SSH3-211ENST00000534112 TRPM5Q9NZQ8 1165 aa22.8■■□□□ 1.24
SSH3-211ENST00000534112 CACNA1GO43497 2377 aa22.8■■□□□ 1.24
SSH3-211ENST00000534112 OBSL1O75147 1896 aa22.79■■□□□ 1.24
SSH3-211ENST00000534112 VPS37CA5D8V6 355 aaPredicted RBP22.79■■□□□ 1.24
SSH3-211ENST00000534112 LEFTY2O00292 366 aa22.79■■□□□ 1.24
SSH3-211ENST00000534112 GIPC1O14908 333 aa22.79■■□□□ 1.24
SSH3-211ENST00000534112 PRPF6O94906 941 aaKnown RBP22.79■■□□□ 1.24
SSH3-211ENST00000534112 PDGFRBP09619 1106 aa22.79■■□□□ 1.24
SSH3-211ENST00000534112 PFKLP17858 780 aa22.79■■□□□ 1.24
SSH3-211ENST00000534112 USP46P62068 366 aa22.79■■□□□ 1.24
SSH3-211ENST00000534112 MAPRE1Q15691 268 aaKnown RBP22.79■■□□□ 1.24
SSH3-211ENST00000534112 GAB4Q2WGN9 574 aa22.79■■□□□ 1.24
SSH3-211ENST00000534112 DAB2IPQ5VWQ8 1189 aa22.79■■□□□ 1.24
SSH3-211ENST00000534112 ANO7Q6IWH7 933 aa22.79■■□□□ 1.24
SSH3-211ENST00000534112 DENND5BQ6ZUT9 1274 aa22.79■■□□□ 1.24
SSH3-211ENST00000534112 CNOT6LQ96LI5 555 aaKnown RBP22.79■■□□□ 1.24
SSH3-211ENST00000534112 PANK4Q9NVE7 773 aa22.79■■□□□ 1.24
SSH3-211ENST00000534112 ABCA7Q8IZY2 2146 aa22.79■■□□□ 1.24
SSH3-211ENST00000534112 PTPRJQ12913 1337 aa22.79■■□□□ 1.24
SSH3-211ENST00000534112 KHNYNO15037 678 aaKnown RBP22.78■■□□□ 1.24
SSH3-211ENST00000534112 CYP27A1Q02318 531 aa22.78■■□□□ 1.24
SSH3-211ENST00000534112 DUOXA2Q1HG44 320 aa22.78■■□□□ 1.24
SSH3-211ENST00000534112 CCDC73Q6ZRK6 1079 aa22.78■■□□□ 1.24
SSH3-211ENST00000534112 ADGRG2Q8IZP9 1017 aa22.78■■□□□ 1.24
SSH3-211ENST00000534112 CCDC33Q8N5R6 958 aa22.78■■□□□ 1.24
SSH3-211ENST00000534112 PANK2Q9BZ23 570 aa22.78■■□□□ 1.24
SSH3-211ENST00000534112 RNF38Q9H0F5 515 aa22.78■■□□□ 1.24
SSH3-211ENST00000534112 MMP17Q9ULZ9 603 aa22.78■■□□□ 1.24
SSH3-211ENST00000534112 ZNF840PA6NDX5 716 aa22.77■■□□□ 1.24
SSH3-211ENST00000534112 ZNF233A6NK53 670 aa22.77■■□□□ 1.24
SSH3-211ENST00000534112 KIAA0391O15091 583 aaKnown RBP22.77■■□□□ 1.24
SSH3-211ENST00000534112 TNNC2P02585 160 aa22.77■■□□□ 1.24
SSH3-211ENST00000534112 PROS1P07225 676 aa22.77■■□□□ 1.24
SSH3-211ENST00000534112 BCKDHBP21953 392 aa22.77■■□□□ 1.24
SSH3-211ENST00000534112 WARSP23381 471 aaKnown RBP22.77■■□□□ 1.24
SSH3-211ENST00000534112 SLC7A9P82251 487 aa22.77■■□□□ 1.24
SSH3-211ENST00000534112 CRY1Q16526 586 aa22.77■■□□□ 1.24
SSH3-211ENST00000534112 FILIP1Q7Z7B0 1213 aa22.77■■□□□ 1.24
SSH3-211ENST00000534112 MDGA1Q8NFP4 955 aa22.77■■□□□ 1.24
SSH3-211ENST00000534112 PCED1BQ96HM7 432 aa22.77■■□□□ 1.24
SSH3-211ENST00000534112 TTLL2Q9BWV7 592 aa22.77■■□□□ 1.24
SSH3-211ENST00000534112 EHD2Q9NZN4 543 aa22.77■■□□□ 1.24
SSH3-211ENST00000534112 CYP17A1P05093 508 aa22.76■■□□□ 1.23
SSH3-211ENST00000534112 ANXA13P27216 316 aa22.76■■□□□ 1.23
SSH3-211ENST00000534112 STAT6P42226 847 aa22.76■■□□□ 1.23
SSH3-211ENST00000534112 MRPS21P82921 87 aaKnown RBP22.76■■□□□ 1.23
SSH3-211ENST00000534112 SH3PXD2AQ5TCZ1 1133 aa22.76■■□□□ 1.23
SSH3-211ENST00000534112 CYP2U1Q7Z449 544 aa22.76■■□□□ 1.23
SSH3-211ENST00000534112 CBWD2Q8IUF1 395 aa22.76■■□□□ 1.23
SSH3-211ENST00000534112 KIAA1958Q8N8K9 716 aa22.76■■□□□ 1.23
SSH3-211ENST00000534112 MYCBPAPQ8TBZ2 947 aa22.76■■□□□ 1.23
SSH3-211ENST00000534112 MMS19Q96T76 1030 aa22.76■■□□□ 1.23
SSH3-211ENST00000534112 TMEM9BQ9NQ34 198 aa22.76■■□□□ 1.23
SSH3-211ENST00000534112 A0A087X0B3 334 aa22.75■■□□□ 1.23
SSH3-211ENST00000534112 PATE3B3GLJ2 98 aa22.75■■□□□ 1.23
SSH3-211ENST00000534112 CDX4O14627 284 aaPredicted RBP22.75■■□□□ 1.23
SSH3-211ENST00000534112 TRIM66O15016 1216 aa22.75■■□□□ 1.23
SSH3-211ENST00000534112 HNRNPLP14866 589 aaKnown RBP eCLIP22.75■■□□□ 1.23
SSH3-211ENST00000534112 SLC6A11P48066 632 aa22.75■■□□□ 1.23
SSH3-211ENST00000534112 PPP3CCP48454 512 aa22.75■■□□□ 1.23
SSH3-211ENST00000534112 NOP14P78316 857 aaKnown RBP22.75■■□□□ 1.23
SSH3-211ENST00000534112 IRX4P78413 519 aa22.75■■□□□ 1.23
SSH3-211ENST00000534112 CEBPZQ03701 1054 aaKnown RBP22.75■■□□□ 1.23
SSH3-211ENST00000534112 DHCR24Q15392 516 aa22.75■■□□□ 1.23
SSH3-211ENST00000534112 SURF1Q15526 300 aa22.75■■□□□ 1.23
SSH3-211ENST00000534112 FAM173BQ6P4H8 233 aa22.75■■□□□ 1.23
SSH3-211ENST00000534112 TMEM92Q6UXU6 159 aa22.75■■□□□ 1.23
SSH3-211ENST00000534112 TTC30AQ86WT1 665 aa22.75■■□□□ 1.23
SSH3-211ENST00000534112 OLIG1Q8TAK6 271 aa22.75■■□□□ 1.23
SSH3-211ENST00000534112 SMPD4Q9NXE4 827 aa22.75■■□□□ 1.23
SSH3-211ENST00000534112 CPQQ9Y646 472 aa22.75■■□□□ 1.23
SSH3-211ENST00000534112 ASPMQ8IZT6 3477 aa22.74■■□□□ 1.23
SSH3-211ENST00000534112 F8VP50 259 aa22.74■■□□□ 1.23
SSH3-211ENST00000534112 SLC9A3R1O14745 358 aaPredicted RBP22.74■■□□□ 1.23
SSH3-211ENST00000534112 OLFM2O95897 454 aa22.74■■□□□ 1.23
SSH3-211ENST00000534112 ABL1P00519 1130 aa22.74■■□□□ 1.23
SSH3-211ENST00000534112 GNL1P36915 607 aaPredicted RBP22.74■■□□□ 1.23
SSH3-211ENST00000534112 DHPSP49366 369 aaPredicted RBP22.74■■□□□ 1.23
SSH3-211ENST00000534112 ZNF252P-AS1Q0IIN9 211 aa22.74■■□□□ 1.23
SSH3-211ENST00000534112 MESP2Q0VG99 397 aa22.74■■□□□ 1.23
SSH3-211ENST00000534112 MDH1BQ5I0G3 518 aa22.74■■□□□ 1.23
SSH3-211ENST00000534112 SFTPA1Q8IWL2 248 aa22.74■■□□□ 1.23
SSH3-211ENST00000534112 CCDC65Q8IXS2 484 aa22.74■■□□□ 1.23
SSH3-211ENST00000534112 GLIS3Q8NEA6 775 aa22.74■■□□□ 1.23
SSH3-211ENST00000534112 PIGKQ92643 395 aa22.74■■□□□ 1.23
SSH3-211ENST00000534112 C8orf48Q96LL4 319 aa22.74■■□□□ 1.23
SSH3-211ENST00000534112 C1QTNF9BB2RNN3 333 aa22.73■■□□□ 1.23
SSH3-211ENST00000534112 SCAMP3O14828 347 aaKnown RBP22.73■■□□□ 1.23
SSH3-211ENST00000534112 ALDH1A2O94788 518 aa22.73■■□□□ 1.23
SSH3-211ENST00000534112 C1QTNF9P0C862 333 aa22.73■■□□□ 1.23
SSH3-211ENST00000534112 CEACAM1P13688 526 aa22.73■■□□□ 1.23
SSH3-211ENST00000534112 PDCP20941 246 aa22.73■■□□□ 1.23
SSH3-211ENST00000534112 CSRP1P21291 193 aaKnown RBP22.73■■□□□ 1.23
SSH3-211ENST00000534112 FOXC1Q12948 553 aa22.73■■□□□ 1.23
SSH3-211ENST00000534112 TAF10Q12962 218 aa22.73■■□□□ 1.23
SSH3-211ENST00000534112 RESTQ13127 1097 aa22.73■■□□□ 1.23
SSH3-211ENST00000534112 RHBDF2Q6PJF5 856 aa22.73■■□□□ 1.23
SSH3-211ENST00000534112 TRAPPC11Q7Z392 1133 aa22.73■■□□□ 1.23
SSH3-211ENST00000534112 WDR49Q8IV35 697 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms