RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 FAM47DPA6NHR8 397 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 PPP6R2O75170 966 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 AP1G2O75843 785 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 YBX3P16989 372 aaKnown RBP eCLIP7.5□□□□□ -1.219e-12■□□□□ 9.1
CTNND1-229ENST00000531014 NPR2P20594 1047 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 NNMTP40261 264 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 ROR1Q01973 937 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 TIMM50Q3ZCQ8 353 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 ZNF394Q53GI3 561 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 ERMARDQ5T6L9 678 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 PRMT9Q6P2P2 845 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 ATG14Q6ZNE5 492 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 PACS2Q86VP3 889 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 CLVS1Q8IUQ0 354 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-229ENST00000531014 ZNF654Q8IZM8 581 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 DENND6BQ8NEG7 585 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 TGFBRAP1Q8WUH2 860 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 TEX13BQ9BXU2 312 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 HDAC6Q9UBN7 1215 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 TRMT6Q9UJA5 497 aaKnown RBP7.5□□□□□ -1.21
CTNND1-229ENST00000531014 ZNF222Q9UK12 451 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 KIAA1024Q9UPX6 916 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 SNX13Q9Y5W8 968 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 MED23Q9ULK4 1368 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 ATP9AO75110 1047 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 CIAO1O76071 339 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 CCNE1P24864 410 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 POU1F1P28069 291 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 GPC5P78333 572 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 KIZQ2M2Z5 673 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 MTERF2Q49AM1 385 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 MZT2AQ6P582 158 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 CCDC185Q8N715 623 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 FAM81AQ8TBF8 368 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 CLIC6Q96NY7 704 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 TDRD3Q9H7E2 651 aaKnown RBP7.5□□□□□ -1.21
CTNND1-229ENST00000531014 ACAD9Q9H845 621 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 KLHL1Q9NR64 748 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 TMEM39AQ9NV64 488 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 MTMR6Q9Y217 621 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 FAM20BO75063 409 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 SERPIND1P05546 499 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 CALB1P05937 261 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 ZSCAN20P17040 1043 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-229ENST00000531014 CD58P19256 250 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 DDR1Q08345 913 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 ZNF846Q147U1 533 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 AGBL2Q5U5Z8 902 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 SAMD3Q8N6K7 520 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 TMEM35BQ8NCS4 154 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 PIGOQ8TEQ8 1089 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 SLC7A3Q8WY07 619 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 TNIP3Q96KP6 325 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 NDST4Q9H3R1 872 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 KMT5AQ9NQR1 393 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 ZNF224Q9NZL3 707 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 MARCOQ9UEW3 520 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-229ENST00000531014 RAB23Q9ULC3 237 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 ABCC12Q96J65 1359 aa7.5□□□□□ -1.21
CTNND1-229ENST00000531014 XRN1Q8IZH2 1706 aaKnown RBP7.49□□□□□ -1.21
CTNND1-229ENST00000531014 ESYT3A0FGR9 886 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 TSPAN4O14817 238 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 APOL3O95236 402 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 VIL1P09327 827 aaKnown RBP7.49□□□□□ -1.21
CTNND1-229ENST00000531014 MYL2P10916 166 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 NPR3P17342 541 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 ATF6P18850 670 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 PEX5P50542 639 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 RAD51Q06609 339 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 CNTN1Q12860 1018 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 PTGDRQ13258 359 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 PPIGQ13427 754 aaKnown RBP eCLIP7.49□□□□□ -1.211e-7■□□□□ 10.9
CTNND1-229ENST00000531014 DDR2Q16832 855 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 DPCR1Q3MIW9 517 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 ERICH5Q6P6B1 374 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 KCNV1Q6PIU1 500 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 MAPKAPK5Q8IW41 473 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 KBTBD2Q8IY47 623 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 GPT2Q8TD30 523 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 DCUN1D1Q96GG9 259 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 NUAK2Q9H093 628 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 IL1RL2Q9HB29 575 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 FARP1Q9Y4F1 1045 aaPredicted RBP7.49□□□□□ -1.21
CTNND1-229ENST00000531014 LOC100653049A0A140TA62 436 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 TEX46H3BTG2 121 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 VWA5AO00534 786 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 TLR2O60603 784 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 FKBP6O75344 327 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 SMNDC1O75940 238 aaKnown RBP eCLIP7.49□□□□□ -1.21
CTNND1-229ENST00000531014 KRT34O76011 436 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 HMGCRP04035 888 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 CLTBP09497 229 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 CTDSPL2Q05D32 466 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 MAP2K5Q13163 448 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 MYBPC2Q14324 1141 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 SMCO1Q147U7 214 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 TSNQ15631 228 aaKnown RBP7.49□□□□□ -1.21
CTNND1-229ENST00000531014 ZBTB49Q6ZSB9 765 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 DGKHQ86XP1 1220 aa7.49□□□□□ -1.21
CTNND1-229ENST00000531014 JADE3Q92613 823 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms