RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 SRSF7Q16629 238 aaKnown RBP eCLIP5.07□□□□□ -1.6
NSMCE2-211ENST00000523549 CT47A1Q5JQC4 288 aaPredicted RBP5.07□□□□□ -1.6
NSMCE2-211ENST00000523549 SDE2Q6IQ49 451 aa5.07□□□□□ -1.6
NSMCE2-211ENST00000523549 GIMAP6Q6P9H5 292 aa5.07□□□□□ -1.6
NSMCE2-211ENST00000523549 LHFPL2Q6ZUX7 228 aa5.07□□□□□ -1.6
NSMCE2-211ENST00000523549 AMIGO2Q86SJ2 522 aa5.07□□□□□ -1.6
NSMCE2-211ENST00000523549 ADGRG5Q8IZF4 528 aa5.07□□□□□ -1.6
NSMCE2-211ENST00000523549 TOR1AIP2Q8NFQ8 470 aa5.07□□□□□ -1.6
NSMCE2-211ENST00000523549 SLC2A13Q96QE2 648 aa5.07□□□□□ -1.6
NSMCE2-211ENST00000523549 C7orf25Q9BPX7 421 aa5.07□□□□□ -1.6
NSMCE2-211ENST00000523549 MTMR10Q9NXD2 777 aa5.07□□□□□ -1.6
NSMCE2-211ENST00000523549 RNF186Q9NXI6 227 aa5.07□□□□□ -1.6
NSMCE2-211ENST00000523549 SAGE1Q9NXZ1 904 aa5.07□□□□□ -1.6
NSMCE2-211ENST00000523549 TMA7Q9Y2S6 64 aaKnown RBP5.07□□□□□ -1.6
NSMCE2-211ENST00000523549 GPR45Q9Y5Y3 372 aa5.07□□□□□ -1.6
NSMCE2-211ENST00000523549 KAT6AQ92794 2004 aa5.07□□□□□ -1.6
NSMCE2-211ENST00000523549 ANKRD11Q6UB99 2663 aaPredicted RBP5.07□□□□□ -1.6
NSMCE2-211ENST00000523549 EPG5Q9HCE0 2579 aa5.07□□□□□ -1.6
NSMCE2-211ENST00000523549 MAP2P11137 1827 aaKnown RBP5.07□□□□□ -1.6
NSMCE2-211ENST00000523549 AFDNP55196 1824 aaKnown RBP5.07□□□□□ -1.6
NSMCE2-211ENST00000523549 USP47Q96K76 1375 aa5.06□□□□□ -1.6
NSMCE2-211ENST00000523549 CCDC7Q96M83 1385 aa5.06□□□□□ -1.6
NSMCE2-211ENST00000523549 TP73O15350 636 aa5.06□□□□□ -1.6
NSMCE2-211ENST00000523549 KCNAB3O43448 404 aa5.06□□□□□ -1.6
NSMCE2-211ENST00000523549 LATS1O95835 1130 aa5.06□□□□□ -1.6
NSMCE2-211ENST00000523549 CHRM2P08172 466 aa5.06□□□□□ -1.6
NSMCE2-211ENST00000523549 VIL1P09327 827 aaKnown RBP5.06□□□□□ -1.6
NSMCE2-211ENST00000523549 PPP3CBP16298 524 aa5.06□□□□□ -1.6
NSMCE2-211ENST00000523549 CPEP16870 476 aa5.06□□□□□ -1.6
NSMCE2-211ENST00000523549 AGXTP21549 392 aa5.06□□□□□ -1.6
NSMCE2-211ENST00000523549 EPHX2P34913 555 aa5.06□□□□□ -1.6
NSMCE2-211ENST00000523549 ERVK-21P61565 698 aa5.06□□□□□ -1.6
NSMCE2-211ENST00000523549 TARDBPQ13148 414 aaKnown RBP eCLIP5.06□□□□□ -1.6
NSMCE2-211ENST00000523549 HLXQ14774 488 aaPredicted RBP5.06□□□□□ -1.6
NSMCE2-211ENST00000523549 LLGL1Q15334 1064 aa5.06□□□□□ -1.6
NSMCE2-211ENST00000523549 ATP2B3Q16720 1220 aa5.06□□□□□ -1.6
NSMCE2-211ENST00000523549 FLYWCH1Q4VC44 716 aa5.06□□□□□ -1.6
NSMCE2-211ENST00000523549 PABPC1LQ4VXU2 614 aaKnown RBP5.06□□□□□ -1.6
NSMCE2-211ENST00000523549 FBXO46Q6PJ61 603 aaPredicted RBP5.06□□□□□ -1.6
NSMCE2-211ENST00000523549 KRT26Q7Z3Y9 468 aa5.06□□□□□ -1.6
NSMCE2-211ENST00000523549 KLHL32Q96NJ5 620 aa5.06□□□□□ -1.6
NSMCE2-211ENST00000523549 ST3GAL5Q9UNP4 418 aa5.06□□□□□ -1.6
NSMCE2-211ENST00000523549 ITGB4P16144 1822 aa5.06□□□□□ -1.6
NSMCE2-211ENST00000523549 LTN1O94822 1766 aa5.06□□□□□ -1.6
NSMCE2-211ENST00000523549 NSD3Q9BZ95 1437 aa5.06□□□□□ -1.6
NSMCE2-211ENST00000523549 ANKRD50Q9ULJ7 1429 aa5.06□□□□□ -1.6
NSMCE2-211ENST00000523549 LINC01548A6NM66 108 aa5.05□□□□□ -1.6
NSMCE2-211ENST00000523549 E7ENX8 843 aa5.05□□□□□ -1.6
NSMCE2-211ENST00000523549 GCOM1H8Y6P7 765 aaPredicted RBP5.05□□□□□ -1.6
NSMCE2-211ENST00000523549 K7ESF4 209 aa5.05□□□□□ -1.6
NSMCE2-211ENST00000523549 GRM6O15303 877 aa5.05□□□□□ -1.6
NSMCE2-211ENST00000523549 SLC43A1O75387 559 aa5.05□□□□□ -1.6
NSMCE2-211ENST00000523549 MTHFD1P11586 935 aaKnown RBP5.05□□□□□ -1.6
NSMCE2-211ENST00000523549 NXPH1P58417 271 aa5.05□□□□□ -1.6
NSMCE2-211ENST00000523549 POU6F2P78424 691 aaPredicted RBP5.05□□□□□ -1.6
NSMCE2-211ENST00000523549 MC2RQ01718 297 aa5.05□□□□□ -1.6
NSMCE2-211ENST00000523549 TAP2Q03519 686 aa5.05□□□□□ -1.6
NSMCE2-211ENST00000523549 ZNF844Q08AG5 666 aa5.05□□□□□ -1.6
NSMCE2-211ENST00000523549 SPATS2Q86XZ4 545 aaKnown RBP5.05□□□□□ -1.6
NSMCE2-211ENST00000523549 CFAP52Q8N1V2 620 aa5.05□□□□□ -1.6
NSMCE2-211ENST00000523549 VGLL2Q8N8G2 317 aa5.05□□□□□ -1.6
NSMCE2-211ENST00000523549 WDR66Q8TBY9 1149 aa5.05□□□□□ -1.6
NSMCE2-211ENST00000523549 IFI44Q8TCB0 444 aa5.05□□□□□ -1.6
NSMCE2-211ENST00000523549 NRG4Q8WWG1 115 aa5.05□□□□□ -1.6
NSMCE2-211ENST00000523549 HAPLN3Q96S86 360 aa5.05□□□□□ -1.6
NSMCE2-211ENST00000523549 KLC4Q9NSK0 619 aa5.05□□□□□ -1.6
NSMCE2-211ENST00000523549 JKAMPQ9P055 326 aa5.05□□□□□ -1.6
NSMCE2-211ENST00000523549 HDAC9Q9UKV0 1011 aa5.05□□□□□ -1.6
NSMCE2-211ENST00000523549 INTUQ9ULD6 942 aa5.05□□□□□ -1.6
NSMCE2-211ENST00000523549 MON2Q7Z3U7 1717 aa5.05□□□□□ -1.6
NSMCE2-211ENST00000523549 CPSF1Q10570 1443 aaKnown RBP5.05□□□□□ -1.6
NSMCE2-211ENST00000523549 USP34Q70CQ2 3546 aa5.05□□□□□ -1.6
NSMCE2-211ENST00000523549 CHD6Q8TD26 2715 aa5.04□□□□□ -1.6
NSMCE2-211ENST00000523549 CDH23Q9H251 3354 aa5.04□□□□□ -1.6
NSMCE2-211ENST00000523549 ADGRA2Q96PE1 1338 aa5.04□□□□□ -1.6
NSMCE2-211ENST00000523549 CCDC195A0A1B0GUA6 201 aa5.04□□□□□ -1.6
NSMCE2-211ENST00000523549 SLC10A2Q12908 348 aaPredicted RBP5.04□□□□□ -1.6
NSMCE2-211ENST00000523549 NOGQ13253 232 aa5.04□□□□□ -1.6
NSMCE2-211ENST00000523549 ZNF782Q6ZMW2 699 aaPredicted RBP5.04□□□□□ -1.6
NSMCE2-211ENST00000523549 RASAL3Q86YV0 1011 aa5.04□□□□□ -1.6
NSMCE2-211ENST00000523549 RHOT1Q8IXI2 618 aa5.04□□□□□ -1.6
NSMCE2-211ENST00000523549 NSUN7Q8NE18 718 aaKnown RBP5.04□□□□□ -1.6
NSMCE2-211ENST00000523549 RFKQ969G6 155 aa5.04□□□□□ -1.6
NSMCE2-211ENST00000523549 HACL1Q9UJ83 578 aa5.04□□□□□ -1.6
NSMCE2-211ENST00000523549 CDYLQ9Y232 598 aa5.04□□□□□ -1.6
NSMCE2-211ENST00000523549 RNF123Q5XPI4 1314 aa5.03□□□□□ -1.6
NSMCE2-211ENST00000523549 WDFY4Q6ZS81 3184 aa5.03□□□□□ -1.6
NSMCE2-211ENST00000523549 PRR35P0CG20 571 aa5.03□□□□□ -1.6
NSMCE2-211ENST00000523549 ITIH3Q06033 890 aa5.03□□□□□ -1.6
NSMCE2-211ENST00000523549 KCTD2Q14681 263 aa5.03□□□□□ -1.6
NSMCE2-211ENST00000523549 MTX3Q5HYI7 312 aa5.03□□□□□ -1.6
NSMCE2-211ENST00000523549 RNF219Q5W0B1 726 aaPredicted RBP5.03□□□□□ -1.6
NSMCE2-211ENST00000523549 ZNF626Q68DY1 528 aa5.03□□□□□ -1.6
NSMCE2-211ENST00000523549 COG1Q8WTW3 980 aa5.03□□□□□ -1.6
NSMCE2-211ENST00000523549 SNX19Q92543 992 aa5.03□□□□□ -1.6
NSMCE2-211ENST00000523549 PRAM1Q96QH2 718 aa5.03□□□□□ -1.6
NSMCE2-211ENST00000523549 SLC45A2Q9UMX9 530 aa5.03□□□□□ -1.6
NSMCE2-211ENST00000523549 BTBD3Q9Y2F9 522 aa5.03□□□□□ -1.6
NSMCE2-211ENST00000523549 C5orf42Q9H799 3197 aa5.03□□□□□ -1.6
NSMCE2-211ENST00000523549 CFAP47Q6ZTR5 3102 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms