RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 TMLHEQ9NVH6 421 aa5.76□□□□□ -1.49
SCARNA16.4-201ENST00000516956 COMMD8Q9NX08 183 aa5.76□□□□□ -1.49
SCARNA16.4-201ENST00000516956 TRPM5Q9NZQ8 1165 aa5.76□□□□□ -1.49
SCARNA16.4-201ENST00000516956 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.76□□□□□ -1.49
SCARNA16.4-201ENST00000516956 CNTN6Q9UQ52 1028 aa5.76□□□□□ -1.49
SCARNA16.4-201ENST00000516956 MRPS23Q9Y3D9 190 aaKnown RBP5.76□□□□□ -1.49
SCARNA16.4-201ENST00000516956 TRIP11Q15643 1979 aa5.76□□□□□ -1.49
SCARNA16.4-201ENST00000516956 KIAA1671Q9BY89 1806 aa5.76□□□□□ -1.49
SCARNA16.4-201ENST00000516956 RNF225M0QZC1 329 aaPredicted RBP5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 O00370 1275 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 DPYSL4O14531 572 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 CAPN9O14815 690 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 XPO1O14980 1071 aaKnown RBP5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 SART1O43290 800 aaKnown RBP5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 RFPL2O75678 378 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 SOAT2O75908 522 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 FBXO21O94952 628 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 SEC24AO95486 1093 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 LSM8O95777 96 aaKnown RBP5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 CALB1P05937 261 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 PNMA6AP0CW24 399 aaPredicted RBP5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 RALAP11233 206 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 LCP1P13796 627 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 FSHRP23945 695 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 CDC25CP30307 473 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 GBP2P32456 591 aaPredicted RBP5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 SSTR3P32745 418 aaPredicted RBP5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 GTF2F1P35269 517 aaKnown RBP eCLIP5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 CLCN1P35523 988 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 CYLC1P35663 651 aaPredicted RBP5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 PBX1P40424 430 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 PPP3CCP48454 512 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 RGS7P49802 495 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 TKTL1P51854 596 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 ZNF132P52740 706 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 ADKP55263 362 aaKnown RBP5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 JAM2P57087 298 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 PDE4CQ08493 712 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 GOLGA8FQ08AF8 430 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 GOLGA8DPQ0D2H9 430 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 SPA17Q15506 151 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 MEA1Q16626 185 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 OR6B2Q6IFH4 312 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 DENND1BQ6P3S1 775 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 TMEM184AQ6ZMB5 413 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 GRASPQ7Z6J2 395 aaPredicted RBP5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 DNAJB7Q7Z6W7 309 aaPredicted RBP5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 GPIHBP1Q8IV16 184 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 FUKQ8N0W3 1084 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 UBR7Q8N806 425 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 C12orf76Q8N812 135 aaPredicted RBP5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 CMASQ8NFW8 434 aaPredicted RBP5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 VN1R2Q8NFZ6 395 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 GPR152Q8TDT2 470 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 WHAMMQ8TF30 809 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 RNF139Q8WU17 664 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 SECISBP2LQ93073 1101 aaKnown RBP5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 PSMG2Q969U7 264 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 ACSF2Q96CM8 615 aaPredicted RBP5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 TRIM11Q96F44 468 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 PPP1R13BQ96KQ4 1090 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 SPATA17Q96L03 361 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 HSFY1Q96LI6 401 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 GUCD1Q96NT3 240 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 CDK5RAP1Q96SZ6 601 aaKnown RBP5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 NAA15Q9BXJ9 866 aaKnown RBP5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 LHX5Q9H2C1 402 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 ADAM7Q9H2U9 754 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 ATXN3LQ9H3M9 355 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 UBE2ZQ9H832 354 aaPredicted RBP5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 PNPLA8Q9NP80 782 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 TLR8Q9NR97 1041 aaKnown RBP5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 AIPL1Q9NZN9 384 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 STRIP2Q9ULQ0 834 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 PCDHGC3Q9UN70 934 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 PLXNA4Q9HCM2 1894 aa5.75□□□□□ -1.49
SCARNA16.4-201ENST00000516956 TMCO5BA8MYB1 307 aa5.74□□□□□ -1.49
SCARNA16.4-201ENST00000516956 H3BQ06 376 aaPredicted RBP5.74□□□□□ -1.49
SCARNA16.4-201ENST00000516956 EPHB6O15197 1021 aa5.74□□□□□ -1.49
SCARNA16.4-201ENST00000516956 LINC01565O15544 149 aa5.74□□□□□ -1.49
SCARNA16.4-201ENST00000516956 MFAP3LO75121 409 aa5.74□□□□□ -1.49
SCARNA16.4-201ENST00000516956 ZBED1O96006 694 aa5.74□□□□□ -1.49
SCARNA16.4-201ENST00000516956 GYPCP04921 128 aa5.74□□□□□ -1.49
SCARNA16.4-201ENST00000516956 MMEP08473 750 aa5.74□□□□□ -1.49
SCARNA16.4-201ENST00000516956 SKILP12757 684 aa5.74□□□□□ -1.49
SCARNA16.4-201ENST00000516956 GABRR2P28476 465 aa5.74□□□□□ -1.49
SCARNA16.4-201ENST00000516956 AVPR1AP37288 418 aa5.74□□□□□ -1.49
SCARNA16.4-201ENST00000516956 PSEN1P49768 467 aa5.74□□□□□ -1.49
SCARNA16.4-201ENST00000516956 SLC5A3P53794 718 aa5.74□□□□□ -1.49
SCARNA16.4-201ENST00000516956 SMAD4Q13485 552 aaKnown RBP5.74□□□□□ -1.49
SCARNA16.4-201ENST00000516956 EFHC1Q5JVL4 640 aa5.74□□□□□ -1.49
SCARNA16.4-201ENST00000516956 CCDC122Q5T0U0 273 aa5.74□□□□□ -1.49
SCARNA16.4-201ENST00000516956 SDHAF4Q5VUM1 108 aa5.74□□□□□ -1.49
SCARNA16.4-201ENST00000516956 NAA35Q5VZE5 725 aa5.74□□□□□ -1.49
SCARNA16.4-201ENST00000516956 BTBD8Q5XKL5 378 aa5.74□□□□□ -1.49
SCARNA16.4-201ENST00000516956 CLEC20AQ6ZU45 233 aa5.74□□□□□ -1.49
SCARNA16.4-201ENST00000516956 TOGARAM2Q6ZUX3 1019 aa5.74□□□□□ -1.49
SCARNA16.4-201ENST00000516956 OTOP3Q7RTS5 596 aa5.74□□□□□ -1.49
SCARNA16.4-201ENST00000516956 GPR149Q86SP6 731 aa5.74□□□□□ -1.49
SCARNA16.4-201ENST00000516956 NOP9Q86U38 636 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms